MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110568 bp
Accession: NZ_CP086866 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain SC33-17 Replicon: plasmid P4
Accession: NZ_CP086866 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain SC33-17 Replicon: plasmid P4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE29_RS22365 (LOE29_22345) | 680..1135 | + | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE29_RS22370 (LOE29_22350) | 1148..1930 | + | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE29_RS22375 (LOE29_22355) | 1959..2417 | + | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE29_RS22380 (LOE29_22360) | 2384..3997 | + | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE29_RS22385 (LOE29_22365) | 3988..4155 | + | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE29_RS22390 (LOE29_22370) | 4216..6117 | + | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE29_RS22395 (LOE29_22375) | 6114..7115 | + | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE29_RS22400 (LOE29_22380) | 7335..7847 | - | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE29_RS22405 (LOE29_22385) | 8030..8296 | - | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE29_RS22410 (LOE29_22390) | 8331..10685 | - | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE29_RS22415 (LOE29_22395) | 10868..11152 | + | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE29_RS22420 (LOE29_22400) | 11200..11862 | - | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE29_RS22425 (LOE29_22405) | 12154..12606 | - | 453 | WP_224557528.1 | cytochrome c | - |
| LOE29_RS22430 (LOE29_22410) | 12668..13162 | - | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE29_RS22435 (LOE29_22415) | 13162..14091 | - | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE29_RS22440 (LOE29_22420) | 14109..15554 | - | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE29_RS22445 (LOE29_22425) | 15716..16165 | + | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE29_RS22450 (LOE29_22430) | 16160..16612 | - | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE29_RS22455 (LOE29_22435) | 16939..17937 | + | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE29_RS22460 (LOE29_22440) | 17934..19115 | + | 1182 | WP_224557529.1 | metal transporter | - |
| LOE29_RS22465 (LOE29_22445) | 19443..20441 | - | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE29_RS22470 (LOE29_22450) | 20602..22236 | + | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE29_RS22475 (LOE29_22455) | 22253..23119 | + | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE29_RS22480 (LOE29_22460) | 24143..24754 | - | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE29_RS22485 (LOE29_22465) | 24802..25686 | - | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE29_RS22490 (LOE29_22470) | 25813..26952 | + | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE29_RS22495 (LOE29_22475) | 27054..27545 | + | 492 | Protein_27 | recombinase family protein | - |
| LOE29_RS22500 (LOE29_22480) | 27624..28019 | - | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE29_RS22505 (LOE29_22485) | 28009..28236 | - | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE29_RS22510 (LOE29_22490) | 28445..29638 | + | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE29_RS22515 (LOE29_22495) | 29622..30554 | + | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE29_RS22520 (LOE29_22500) | 30768..31979 | + | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE29_RS22525 (LOE29_22505) | 32148..33909 | + | 1762 | Protein_33 | ParB N-terminal domain-containing protein | - |
| LOE29_RS22530 (LOE29_22510) | 34066..35433 | - | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE29_RS22535 (LOE29_22515) | 35430..36089 | - | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE29_RS22540 (LOE29_22520) | 36235..36552 | + | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE29_RS22545 (LOE29_22525) | 36509..37894 | + | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE29_RS22550 (LOE29_22530) | 38075..38455 | + | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE29_RS22555 (LOE29_22535) | 38491..38961 | + | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE29_RS22560 (LOE29_22540) | 38973..41180 | + | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE29_RS22565 (LOE29_22545) | 41161..42141 | + | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE29_RS22570 (LOE29_22550) | 42147..44054 | + | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE29_RS22575 (LOE29_22555) | 44051..44752 | + | 702 | WP_028288616.1 | VIT family protein | - |
| LOE29_RS22580 (LOE29_22560) | 44888..45049 | + | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE29_RS22585 (LOE29_22565) | 45078..45371 | - | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE29_RS22590 (LOE29_22570) | 45709..46194 | + | 486 | WP_107817799.1 | hypothetical protein | - |
| LOE29_RS22595 (LOE29_22575) | 46235..47173 | + | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE29_RS22600 (LOE29_22580) | 47197..47469 | + | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE29_RS22605 (LOE29_22585) | 47557..47946 | + | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE29_RS22610 (LOE29_22590) | 48161..49192 | + | 1032 | WP_229940647.1 | IS110 family transposase ISRhru3 | Transposase |
| LOE29_RS22615 (LOE29_22595) | 49660..51642 | + | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE29_RS22620 (LOE29_22600) | 51715..52407 | + | 693 | WP_224557484.1 | regulator | - |
| LOE29_RS22625 (LOE29_22605) | 52407..53060 | + | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE29_RS22630 (LOE29_22610) | 53184..53510 | + | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE29_RS22635 (LOE29_22615) | 53507..54024 | + | 518 | Protein_55 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE29_RS22640 (LOE29_22620) | 54563..54844 | - | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE29_RS22645 (LOE29_22625) | 55063..56192 | + | 1130 | WP_224557493.1 | IS3 family transposase ISRhba2 | Transposase |
| LOE29_RS22650 (LOE29_22630) | 56219..56611 | + | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE29_RS22655 (LOE29_22635) | 56792..57613 | - | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE29_RS22660 (LOE29_22640) | 57610..58650 | - | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE29_RS22665 (LOE29_22645) | 58647..59582 | - | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE29_RS22670 (LOE29_22650) | 59587..60375 | - | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE29_RS22675 (LOE29_22655) | 60414..61415 | - | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE29_RS22680 (LOE29_22660) | 61513..62367 | - | 855 | WP_074838803.1 | VOC family protein | - |
| LOE29_RS22685 (LOE29_22665) | 62400..63254 | - | 855 | WP_224557497.1 | VOC family protein | - |
| LOE29_RS22690 (LOE29_22670) | 63262..64068 | - | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE29_RS22695 (LOE29_22675) | 64061..64861 | - | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE29_RS22700 (LOE29_22680) | 64858..65916 | - | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE29_RS22705 (LOE29_22685) | 65909..66781 | - | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE29_RS22710 (LOE29_22690) | 66808..67974 | - | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE29_RS22715 (LOE29_22695) | 68029..68715 | - | 687 | WP_170850597.1 | TetR/AcrR family transcriptional regulator | - |
| LOE29_RS22720 (LOE29_22700) | 68705..69031 | - | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE29_RS22725 (LOE29_22705) | 69028..69795 | - | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE29_RS22730 (LOE29_22710) | 69861..70376 | - | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE29_RS22735 (LOE29_22715) | 70373..71659 | - | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE29_RS22740 (LOE29_22720) | 71688..72890 | - | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE29_RS22745 (LOE29_22725) | 73053..73553 | + | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE29_RS22750 (LOE29_22730) | 73873..75039 | - | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE29_RS22755 (LOE29_22735) | 75036..77039 | - | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE29_RS22760 (LOE29_22740) | 77036..77830 | - | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE29_RS22765 (LOE29_22745) | 77840..79438 | - | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE29_RS22770 (LOE29_22750) | 79518..80132 | - | 615 | Protein_82 | IS21 family transposase ISPve1 | Transposase |
| LOE29_RS22775 (LOE29_22755) | 80129..81574 | - | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE29_RS22780 (LOE29_22760) | 81735..82013 | - | 279 | Protein_84 | transposase | - |
| LOE29_RS22785 (LOE29_22765) | 82302..83069 | + | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE29_RS22790 (LOE29_22770) | 83105..83821 | - | 717 | WP_224557509.1 | methyltransferase | - |
| LOE29_RS22795 (LOE29_22775) | 84800..85729 | + | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE29_RS22800 (LOE29_22780) | 86268..86474 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE29_RS22805 (LOE29_22785) | 87027..87584 | + | 558 | WP_224557513.1 | transposase | - |
| LOE29_RS22810 (LOE29_22790) | 87571..89904 | + | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE29_RS22815 (LOE29_22795) | 89913..91913 | + | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE29_RS22820 (LOE29_22800) | 92031..92813 | - | 783 | Protein_92 | LysR family transcriptional regulator | - |
| LOE29_RS22825 (LOE29_22805) | 92797..93447 | - | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE29_RS22830 (LOE29_22810) | 93495..94853 | - | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE29_RS22835 (LOE29_22815) | 94865..96328 | - | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE29_RS22840 (LOE29_22820) | 96623..97045 | - | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE29_RS22845 (LOE29_22825) | 97244..97444 | - | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE29_RS22850 (LOE29_22830) | 97585..100092 | + | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE29_RS22855 (LOE29_22835) | 100112..100531 | + | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE29_RS22860 (LOE29_22840) | 100655..101527 | + | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE29_RS22865 (LOE29_22845) | 101550..102314 | + | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE29_RS22870 (LOE29_22850) | 102415..103155 | - | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE29_RS22875 (LOE29_22855) | 103152..103643 | - | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE29_RS22880 (LOE29_22860) | 103640..103840 | - | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE29_RS22885 (LOE29_22865) | 103982..104947 | - | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE29_RS22890 (LOE29_22870) | 104937..105692 | - | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE29_RS22895 (LOE29_22875) | 105789..106367 | - | 579 | WP_028095362.1 | cation transporter | - |
| LOE29_RS22900 (LOE29_22880) | 106471..106899 | - | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE29_RS22905 (LOE29_22885) | 107107..107673 | + | 567 | WP_028095363.1 | SCO family protein | - |
| LOE29_RS22910 (LOE29_22890) | 107679..108101 | + | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE29_RS22915 (LOE29_22895) | 108098..108757 | + | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE29_RS22920 (LOE29_22900) | 108781..109248 | + | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE29_RS22925 (LOE29_22905) | 109248..109874 | + | 627 | WP_028095367.1 | SCO family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|