MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82233 bp
Accession: NZ_CP086853 Location: 1..82233 Organism: Pseudosulfitobacter pseudonitzschiae strain SC33-87 Replicon: plasmid P6
Accession: NZ_CP086853 Location: 1..82233 Organism: Pseudosulfitobacter pseudonitzschiae strain SC33-87 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE31_RS23875 (LOE31_23865) | 801..1910 | + | 1110 | WP_229939302.1 | ABC transporter substrate-binding protein | - |
| LOE31_RS23880 (LOE31_23870) | 1907..2836 | + | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE31_RS23885 (LOE31_23875) | 2880..3644 | + | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE31_RS23890 (LOE31_23880) | 3641..5089 | + | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE31_RS23895 (LOE31_23885) | 5120..5437 | - | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE31_RS23900 (LOE31_23890) | 5447..6163 | - | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE31_RS23905 (LOE31_23895) | 6179..6874 | - | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE31_RS23910 (LOE31_23900) | 6867..7652 | - | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE31_RS23915 (LOE31_23905) | 7649..8401 | - | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE31_RS23920 (LOE31_23910) | 8668..9630 | + | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE31_RS23925 (LOE31_23915) | 9716..11590 | + | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE31_RS23930 (LOE31_23920) | 11612..13297 | + | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE31_RS23935 (LOE31_23925) | 13323..14765 | + | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE31_RS23940 (LOE31_23930) | 14789..15418 | + | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE31_RS23945 (LOE31_23935) | 15834..17507 | - | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE31_RS23950 (LOE31_23940) | 17516..18223 | - | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE31_RS23955 (LOE31_23945) | 18362..21088 | - | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE31_RS23960 (LOE31_23950) | 21058..22104 | - | 1047 | WP_081855458.1 | serine protease | - |
| LOE31_RS23965 (LOE31_23955) | 22110..24080 | - | 1971 | WP_224557597.1 | caspase family protein | - |
| LOE31_RS23970 (LOE31_23960) | 24244..24807 | - | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE31_RS23975 (LOE31_23965) | 25095..25682 | + | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE31_RS23980 (LOE31_23970) | 25840..27294 | - | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE31_RS23985 (LOE31_23975) | 27336..28661 | - | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE31_RS23990 (LOE31_23980) | 28658..29353 | - | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE31_RS23995 (LOE31_23985) | 29346..30590 | - | 1245 | WP_224557592.1 | trypsin-like peptidase domain-containing protein | - |
| LOE31_RS24000 (LOE31_23990) | 30787..31407 | + | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE31_RS24005 (LOE31_23995) | 31419..33491 | + | 2073 | WP_224557590.1 | caspase family protein | - |
| LOE31_RS24010 (LOE31_24000) | 33590..34570 | - | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE31_RS24015 (LOE31_24005) | 34567..35769 | - | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE31_RS24020 (LOE31_24010) | 36395..37405 | + | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE31_RS24025 (LOE31_24015) | 37542..38978 | - | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE31_RS24030 (LOE31_24020) | 38975..40564 | - | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE31_RS24035 (LOE31_24025) | 41139..41894 | - | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE31_RS24040 (LOE31_24030) | 42007..42714 | + | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE31_RS24045 (LOE31_24035) | 42711..43397 | + | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE31_RS24050 (LOE31_24040) | 43606..45441 | - | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE31_RS24055 (LOE31_24045) | 45610..47133 | - | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE31_RS24060 (LOE31_24050) | 47263..48219 | - | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE31_RS24065 (LOE31_24055) | 48628..49494 | - | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE31_RS24070 (LOE31_24060) | 49506..49808 | - | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE31_RS24075 (LOE31_24065) | 49898..50830 | - | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE31_RS24080 (LOE31_24070) | 50999..52063 | + | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE31_RS24085 (LOE31_24075) | 52145..53665 | + | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE31_RS24090 (LOE31_24080) | 53678..54874 | + | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE31_RS24095 (LOE31_24085) | 54887..56629 | + | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE31_RS24100 (LOE31_24090) | 56629..57555 | + | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE31_RS24105 (LOE31_24095) | 57592..58509 | + | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE31_RS24110 (LOE31_24100) | 58598..59158 | + | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE31_RS24115 (LOE31_24105) | 59155..60210 | + | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE31_RS24120 (LOE31_24110) | 60207..61085 | + | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE31_RS24125 (LOE31_24115) | 61376..62071 | + | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE31_RS24130 (LOE31_24120) | 62270..63448 | - | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE31_RS24135 (LOE31_24125) | 63448..64764 | - | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE31_RS24140 (LOE31_24130) | 64781..66328 | - | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE31_RS24145 (LOE31_24135) | 66420..67190 | + | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE31_RS24150 (LOE31_24140) | 67659..67934 | - | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE31_RS24155 (LOE31_24145) | 67927..68220 | - | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE31_RS24160 (LOE31_24150) | 68291..69196 | - | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE31_RS24165 (LOE31_24155) | 69207..70946 | - | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE31_RS24170 (LOE31_24160) | 71208..72743 | + | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE31_RS24175 (LOE31_24165) | 72749..73723 | + | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE31_RS24180 (LOE31_24170) | 73787..75001 | - | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE31_RS24185 (LOE31_24175) | 75103..75741 | - | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE31_RS24190 (LOE31_24180) | 75801..76229 | + | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE31_RS24195 (LOE31_24185) | 76460..77389 | - | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE31_RS24200 (LOE31_24190) | 77376..77681 | - | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE31_RS24205 (LOE31_24195) | 77810..78043 | + | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE31_RS24210 (LOE31_24200) | 78382..79200 | + | 819 | Protein_68 | GTP-binding protein | - |
| LOE31_RS24215 (LOE31_24205) | 79279..79866 | - | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|