MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110568 bp
Accession: NZ_CP086852 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain SC33-87 Replicon: plasmid P5
Accession: NZ_CP086852 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain SC33-87 Replicon: plasmid P5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE31_RS23305 (LOE31_23295) | 790..1719 | + | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE31_RS23310 (LOE31_23300) | 1719..2213 | + | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE31_RS23315 (LOE31_23305) | 2275..2727 | + | 453 | WP_224557528.1 | cytochrome c | - |
| LOE31_RS23320 (LOE31_23310) | 3019..3681 | + | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE31_RS23325 (LOE31_23315) | 3729..4013 | - | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE31_RS23330 (LOE31_23320) | 4196..6550 | + | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE31_RS23335 (LOE31_23325) | 6585..6851 | + | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE31_RS23340 (LOE31_23330) | 7034..7546 | + | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE31_RS23345 (LOE31_23335) | 7766..8767 | - | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE31_RS23350 (LOE31_23340) | 8764..10665 | - | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE31_RS23355 (LOE31_23345) | 10726..10893 | - | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE31_RS23360 (LOE31_23350) | 10884..12497 | - | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE31_RS23365 (LOE31_23355) | 12464..12922 | - | 459 | WP_224557524.1 | signal peptidase II | - |
| LOE31_RS23370 (LOE31_23360) | 12951..13733 | - | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE31_RS23375 (LOE31_23365) | 13746..14201 | - | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE31_RS23380 (LOE31_23370) | 14205..15578 | - | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE31_RS23385 (LOE31_23375) | 15575..16201 | - | 627 | WP_028095367.1 | SCO family protein | - |
| LOE31_RS23390 (LOE31_23380) | 16201..16668 | - | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE31_RS23395 (LOE31_23385) | 16692..17351 | - | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE31_RS23400 (LOE31_23390) | 17348..17770 | - | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE31_RS23405 (LOE31_23395) | 17776..18342 | - | 567 | WP_028095363.1 | SCO family protein | - |
| LOE31_RS23410 (LOE31_23400) | 18550..18978 | + | 429 | WP_013959865.1 | helix-turn-helix domain-containing protein | - |
| LOE31_RS23415 (LOE31_23405) | 19082..19660 | + | 579 | WP_028095362.1 | cation transporter | - |
| LOE31_RS23420 (LOE31_23410) | 19757..20512 | + | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE31_RS23425 (LOE31_23415) | 20502..21467 | + | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE31_RS23430 (LOE31_23420) | 21609..21809 | + | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE31_RS23435 (LOE31_23425) | 21806..22297 | + | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE31_RS23440 (LOE31_23430) | 22294..23034 | + | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE31_RS23445 (LOE31_23435) | 23135..23899 | - | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE31_RS23450 (LOE31_23440) | 23922..24794 | - | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE31_RS23455 (LOE31_23445) | 24918..25337 | - | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE31_RS23460 (LOE31_23450) | 25357..27864 | - | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE31_RS23465 (LOE31_23455) | 28005..28205 | + | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE31_RS23470 (LOE31_23460) | 28404..28826 | + | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE31_RS23475 (LOE31_23465) | 29121..30584 | + | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE31_RS23480 (LOE31_23470) | 30596..31954 | + | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE31_RS23485 (LOE31_23475) | 32002..32652 | + | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE31_RS23490 (LOE31_23480) | 32636..33418 | + | 783 | Protein_38 | LysR family transcriptional regulator | - |
| LOE31_RS23495 (LOE31_23485) | 33536..35536 | - | 2001 | WP_224557516.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LOE31_RS23500 (LOE31_23490) | 35545..37878 | - | 2334 | WP_224557515.1 | relaxase/mobilization nuclease domain-containing protein | - |
| LOE31_RS23505 (LOE31_23495) | 37865..38422 | - | 558 | WP_224557513.1 | transposase | - |
| LOE31_RS23510 (LOE31_23500) | 38975..39181 | - | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE31_RS23515 (LOE31_23505) | 39720..40649 | - | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE31_RS23520 (LOE31_23510) | 41628..42344 | + | 717 | WP_224557509.1 | methyltransferase | - |
| LOE31_RS23525 (LOE31_23515) | 42380..43147 | - | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE31_RS23530 (LOE31_23520) | 43436..43714 | + | 279 | Protein_46 | transposase | - |
| LOE31_RS23535 (LOE31_23525) | 43875..45320 | + | 1446 | WP_229939271.1 | IS21 family transposase | - |
| LOE31_RS23540 (LOE31_23530) | 45317..45931 | + | 615 | Protein_48 | IS21-like element helper ATPase IstB | - |
| LOE31_RS23545 (LOE31_23535) | 46011..47609 | + | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE31_RS23550 (LOE31_23540) | 47619..48413 | + | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE31_RS23555 (LOE31_23545) | 48410..50413 | + | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE31_RS23560 (LOE31_23550) | 50410..51576 | + | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE31_RS23565 (LOE31_23555) | 51896..52396 | - | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE31_RS23570 (LOE31_23560) | 52559..53761 | + | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE31_RS23575 (LOE31_23565) | 53790..55076 | + | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE31_RS23580 (LOE31_23570) | 55073..55588 | + | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE31_RS23585 (LOE31_23575) | 55654..56421 | + | 768 | WP_211568985.1 | SDR family oxidoreductase | - |
| LOE31_RS23590 (LOE31_23580) | 56418..56744 | + | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE31_RS23595 (LOE31_23585) | 56734..57420 | + | 687 | WP_170850597.1 | TetR/AcrR family transcriptional regulator | - |
| LOE31_RS23600 (LOE31_23590) | 57475..58641 | + | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE31_RS23605 (LOE31_23595) | 58668..59540 | + | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE31_RS23610 (LOE31_23600) | 59533..60591 | + | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE31_RS23615 (LOE31_23605) | 60588..61388 | + | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE31_RS23620 (LOE31_23610) | 61381..62187 | + | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE31_RS23625 (LOE31_23615) | 62195..63049 | + | 855 | WP_224557497.1 | VOC family protein | - |
| LOE31_RS23630 (LOE31_23620) | 63082..63936 | + | 855 | WP_074838803.1 | VOC family protein | - |
| LOE31_RS23635 (LOE31_23625) | 64034..65035 | + | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE31_RS23640 (LOE31_23630) | 65074..65862 | + | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE31_RS23645 (LOE31_23635) | 65867..66802 | + | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE31_RS23650 (LOE31_23640) | 66799..67839 | + | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE31_RS23655 (LOE31_23645) | 67836..68657 | + | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE31_RS23660 (LOE31_23650) | 69111..69260 | + | 150 | WP_224557495.1 | hypothetical protein | - |
| LOE31_RS23670 (LOE31_23660) | 70605..70886 | + | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE31_RS23675 (LOE31_23665) | 71425..71942 | - | 518 | Protein_75 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE31_RS23680 (LOE31_23670) | 71939..72265 | - | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE31_RS23685 (LOE31_23675) | 72389..73042 | - | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE31_RS23690 (LOE31_23680) | 73042..73734 | - | 693 | WP_224557484.1 | regulator | - |
| LOE31_RS23695 (LOE31_23685) | 73807..75789 | - | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE31_RS23700 (LOE31_23690) | 76257..77288 | - | 1032 | WP_224558028.1 | IS110 family transposase | - |
| LOE31_RS23705 (LOE31_23695) | 77503..77892 | - | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE31_RS23710 (LOE31_23700) | 77980..78252 | - | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE31_RS23715 (LOE31_23705) | 78276..79214 | - | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE31_RS23720 (LOE31_23710) | 79255..79725 | - | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE31_RS23725 (LOE31_23715) | 80078..80371 | + | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE31_RS23730 (LOE31_23720) | 80400..80561 | - | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE31_RS23735 (LOE31_23725) | 80697..81398 | - | 702 | WP_028288616.1 | VIT family protein | - |
| LOE31_RS23740 (LOE31_23730) | 81395..83302 | - | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE31_RS23745 (LOE31_23735) | 83308..84288 | - | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE31_RS23750 (LOE31_23740) | 84269..86476 | - | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE31_RS23755 (LOE31_23745) | 86488..86958 | - | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE31_RS23760 (LOE31_23750) | 86994..87374 | - | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE31_RS23765 (LOE31_23755) | 87555..88940 | - | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE31_RS23770 (LOE31_23760) | 88897..89214 | - | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE31_RS23775 (LOE31_23765) | 89360..90019 | + | 660 | WP_009503873.1 | response regulator transcription factor | - |
| LOE31_RS23780 (LOE31_23770) | 90016..91383 | + | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE31_RS23785 (LOE31_23775) | 91540..93301 | - | 1762 | Protein_97 | ParB N-terminal domain-containing protein | - |
| LOE31_RS23790 (LOE31_23780) | 93470..94681 | - | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE31_RS23795 (LOE31_23785) | 94895..95827 | - | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE31_RS23800 (LOE31_23790) | 95811..97004 | - | 1194 | WP_009503867.1 | plasmid partitioning protein RepA | - |
| LOE31_RS23805 (LOE31_23795) | 97213..97440 | + | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE31_RS23810 (LOE31_23800) | 97430..97825 | + | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE31_RS23815 (LOE31_23805) | 97904..98395 | - | 492 | Protein_103 | recombinase family protein | - |
| LOE31_RS23820 (LOE31_23810) | 98497..99648 | - | 1152 | WP_224557873.1 | tyrosine-type recombinase/integrase | - |
| LOE31_RS23825 (LOE31_23815) | 99763..100647 | + | 885 | WP_229996243.1 | DUF1403 family protein | - |
| LOE31_RS23830 (LOE31_23820) | 100695..101306 | + | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE31_RS23835 (LOE31_23825) | 102330..103196 | - | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE31_RS23840 (LOE31_23830) | 103213..104847 | - | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE31_RS23845 (LOE31_23835) | 105008..106006 | + | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE31_RS23850 (LOE31_23840) | 106334..107515 | - | 1182 | WP_224557529.1 | metal transporter | - |
| LOE31_RS23855 (LOE31_23845) | 107512..108510 | - | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE31_RS23860 (LOE31_23850) | 108837..109289 | + | 453 | WP_054540798.1 | manganese-binding transcriptional regulator MntR | - |
| LOE31_RS23865 (LOE31_23855) | 109284..109733 | - | 450 | WP_176441066.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|