MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82222 bp
Accession: NZ_CP086846 Location: 1..82222 Organism: Pseudosulfitobacter pseudonitzschiae strain TC12-31 Replicon: plasmid P7
Accession: NZ_CP086846 Location: 1..82222 Organism: Pseudosulfitobacter pseudonitzschiae strain TC12-31 Replicon: plasmid P7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE24_RS24460 (LOE24_24425) | 1..564 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE24_RS24465 (LOE24_24430) | 725..2698 | + | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE24_RS24470 (LOE24_24435) | 2704..3750 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE24_RS24475 (LOE24_24440) | 3720..6446 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE24_RS24480 (LOE24_24445) | 6585..7292 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE24_RS24485 (LOE24_24450) | 7301..8974 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE24_RS24490 (LOE24_24455) | 9390..10019 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE24_RS24495 (LOE24_24460) | 10043..11485 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE24_RS24500 (LOE24_24465) | 11511..13196 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE24_RS24505 (LOE24_24470) | 13218..15092 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE24_RS24510 (LOE24_24475) | 15178..16140 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE24_RS24515 (LOE24_24480) | 16407..17159 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE24_RS24520 (LOE24_24485) | 17156..17941 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE24_RS24525 (LOE24_24490) | 17934..18629 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE24_RS24530 (LOE24_24495) | 18645..19361 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE24_RS24535 (LOE24_24500) | 19371..19688 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE24_RS24540 (LOE24_24505) | 19719..21167 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE24_RS24545 (LOE24_24510) | 21164..21928 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE24_RS24550 (LOE24_24515) | 21972..22901 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE24_RS24555 (LOE24_24520) | 22898..24040 | - | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE24_RS24560 (LOE24_24525) | 24116..27007 | - | 2892 | WP_224558003.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE24_RS24565 (LOE24_24530) | 27173..27760 | + | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE24_RS24570 (LOE24_24535) | 27839..28657 | - | 819 | Protein_22 | GTP-binding protein | - |
| LOE24_RS24575 (LOE24_24540) | 28996..29229 | - | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE24_RS24580 (LOE24_24545) | 29358..29663 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE24_RS24585 (LOE24_24550) | 29650..30579 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE24_RS24590 (LOE24_24555) | 30810..31238 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE24_RS24595 (LOE24_24560) | 31298..31936 | + | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE24_RS24600 (LOE24_24565) | 32038..33252 | + | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE24_RS24605 (LOE24_24570) | 33316..34290 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE24_RS24610 (LOE24_24575) | 34296..35831 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE24_RS24615 (LOE24_24580) | 36093..37831 | + | 1739 | Protein_31 | L-arabinonate dehydratase | - |
| LOE24_RS24620 (LOE24_24585) | 37842..38747 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE24_RS24625 (LOE24_24590) | 38818..39111 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE24_RS24630 (LOE24_24595) | 39104..39379 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE24_RS24635 (LOE24_24600) | 39848..40618 | - | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE24_RS24640 (LOE24_24605) | 40710..42257 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE24_RS24645 (LOE24_24610) | 42274..42606 | + | 333 | WP_229996421.1 | hypothetical protein | - |
| LOE24_RS24650 (LOE24_24615) | 42603..43589 | + | 987 | WP_229996422.1 | hypothetical protein | - |
| LOE24_RS24655 (LOE24_24620) | 43589..44767 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE24_RS24660 (LOE24_24625) | 44966..45661 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE24_RS24665 (LOE24_24630) | 45952..46830 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE24_RS24670 (LOE24_24635) | 46827..47881 | - | 1055 | Protein_42 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE24_RS24675 (LOE24_24640) | 47878..48438 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE24_RS24680 (LOE24_24645) | 48527..49444 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE24_RS24685 (LOE24_24650) | 49481..50407 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE24_RS24690 (LOE24_24655) | 50407..52149 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE24_RS24695 (LOE24_24660) | 52162..53357 | - | 1196 | Protein_47 | sugar ABC transporter permease | - |
| LOE24_RS24700 (LOE24_24665) | 53370..54890 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE24_RS24705 (LOE24_24670) | 54972..56036 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE24_RS24710 (LOE24_24675) | 56205..57137 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE24_RS24715 (LOE24_24680) | 57227..57529 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE24_RS24720 (LOE24_24685) | 57541..58407 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE24_RS24725 (LOE24_24690) | 58812..59768 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE24_RS24730 (LOE24_24695) | 59898..61420 | + | 1523 | Protein_54 | aldehyde dehydrogenase family protein | - |
| LOE24_RS24735 (LOE24_24700) | 61589..63424 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE24_RS24740 (LOE24_24705) | 63633..64319 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE24_RS24745 (LOE24_24710) | 64316..65023 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE24_RS24750 (LOE24_24715) | 65136..65891 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE24_RS24755 (LOE24_24720) | 66466..68055 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE24_RS24760 (LOE24_24725) | 68052..69488 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE24_RS24765 (LOE24_24730) | 69625..70635 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE24_RS24770 (LOE24_24735) | 71261..72463 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE24_RS24775 (LOE24_24740) | 72460..73440 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE24_RS24780 (LOE24_24745) | 73539..75623 | - | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE24_RS24785 (LOE24_24750) | 75623..76243 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE24_RS24790 (LOE24_24755) | 76434..77684 | + | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE24_RS24795 (LOE24_24760) | 77677..78372 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE24_RS24800 (LOE24_24765) | 78369..79694 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE24_RS24805 (LOE24_24770) | 79736..81190 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE24_RS24810 (LOE24_24775) | 81348..81935 | - | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|