MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110569 bp
Accession: NZ_CP086843 Location: 1..110569 Organism: Pseudosulfitobacter pseudonitzschiae strain TC12-31 Replicon: plasmid P4
Accession: NZ_CP086843 Location: 1..110569 Organism: Pseudosulfitobacter pseudonitzschiae strain TC12-31 Replicon: plasmid P4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE24_RS22995 (LOE24_22960) | 1..273 | + | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE24_RS23000 (LOE24_22965) | 361..750 | + | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE24_RS23005 (LOE24_22970) | 965..1995 | + | 1031 | Protein_2 | IS110 family transposase ISRhru3 | Transposase |
| LOE24_RS23010 (LOE24_22975) | 2463..4445 | + | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE24_RS23015 (LOE24_22980) | 4518..5210 | + | 693 | WP_224557484.1 | regulator | - |
| LOE24_RS23020 (LOE24_22985) | 5210..5863 | + | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE24_RS23025 (LOE24_22990) | 5987..6313 | + | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE24_RS23030 (LOE24_22995) | 6310..6827 | + | 518 | Protein_7 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE24_RS23035 (LOE24_23000) | 7366..7647 | - | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE24_RS23040 (LOE24_23005) | 7866..8995 | + | 1130 | WP_224557493.1 | IS3 family transposase ISRhba2 | Transposase |
| LOE24_RS23045 (LOE24_23010) | 9022..9414 | + | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE24_RS23050 (LOE24_23015) | 9595..10416 | - | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE24_RS23055 (LOE24_23020) | 10413..11453 | - | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE24_RS23060 (LOE24_23025) | 11450..12385 | - | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE24_RS23065 (LOE24_23030) | 12390..13178 | - | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE24_RS23070 (LOE24_23035) | 13217..14218 | - | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE24_RS23075 (LOE24_23040) | 14316..15170 | - | 855 | WP_074838803.1 | VOC family protein | - |
| LOE24_RS23080 (LOE24_23045) | 15203..16057 | - | 855 | WP_224557497.1 | VOC family protein | - |
| LOE24_RS23085 (LOE24_23050) | 16065..16871 | - | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE24_RS23090 (LOE24_23055) | 16864..17664 | - | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE24_RS23095 (LOE24_23060) | 17661..18719 | - | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE24_RS23100 (LOE24_23065) | 18712..19584 | - | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE24_RS23105 (LOE24_23070) | 19611..20777 | - | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE24_RS23110 (LOE24_23075) | 20832..21533 | - | 702 | WP_083416142.1 | TetR/AcrR family transcriptional regulator | - |
| LOE24_RS23115 (LOE24_23080) | 21508..21834 | - | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE24_RS23120 (LOE24_23085) | 21831..22598 | - | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE24_RS23125 (LOE24_23090) | 22664..23179 | - | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE24_RS23130 (LOE24_23095) | 23176..24462 | - | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE24_RS23135 (LOE24_23100) | 24491..25693 | - | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE24_RS23140 (LOE24_23105) | 25856..26356 | + | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE24_RS23145 (LOE24_23110) | 26676..27842 | - | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE24_RS23150 (LOE24_23115) | 27839..29842 | - | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE24_RS23155 (LOE24_23120) | 29839..30633 | - | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE24_RS23160 (LOE24_23125) | 30643..32241 | - | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE24_RS23165 (LOE24_23130) | 32321..32935 | - | 615 | Protein_34 | IS21 family transposase ISPve1 | Transposase |
| LOE24_RS23170 (LOE24_23135) | 32932..34377 | - | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE24_RS23175 (LOE24_23140) | 34538..34816 | - | 279 | Protein_36 | transposase | - |
| LOE24_RS23180 (LOE24_23145) | 35105..35872 | + | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE24_RS23185 (LOE24_23150) | 35908..36624 | - | 717 | WP_224557509.1 | methyltransferase | - |
| LOE24_RS23190 (LOE24_23155) | 37603..38532 | + | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE24_RS23195 (LOE24_23160) | 39071..39277 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE24_RS23200 (LOE24_23165) | 39830..40387 | + | 558 | WP_224557513.1 | transposase | - |
| LOE24_RS23205 (LOE24_23170) | 40374..42707 | + | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE24_RS23210 (LOE24_23175) | 42716..44716 | + | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE24_RS23215 (LOE24_23180) | 44834..45616 | - | 783 | Protein_44 | LysR family transcriptional regulator | - |
| LOE24_RS23220 (LOE24_23185) | 45600..46250 | - | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE24_RS23225 (LOE24_23190) | 46298..47656 | - | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE24_RS23230 (LOE24_23195) | 47668..49131 | - | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE24_RS23235 (LOE24_23200) | 49426..49848 | - | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE24_RS23240 (LOE24_23205) | 50047..50247 | - | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE24_RS23245 (LOE24_23210) | 50388..52895 | + | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE24_RS23250 (LOE24_23215) | 52915..53334 | + | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE24_RS23255 (LOE24_23220) | 53458..54330 | + | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE24_RS23260 (LOE24_23225) | 54353..55117 | + | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE24_RS23265 (LOE24_23230) | 55218..55958 | - | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE24_RS23270 (LOE24_23235) | 55955..56446 | - | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE24_RS23275 (LOE24_23240) | 56443..56643 | - | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE24_RS23280 (LOE24_23245) | 56785..57750 | - | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE24_RS23285 (LOE24_23250) | 57740..58495 | - | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE24_RS23290 (LOE24_23255) | 58592..59170 | - | 579 | WP_028095362.1 | cation transporter | - |
| LOE24_RS23295 (LOE24_23260) | 59274..59702 | - | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE24_RS23300 (LOE24_23265) | 59910..60476 | + | 567 | WP_028095363.1 | SCO family protein | - |
| LOE24_RS23305 (LOE24_23270) | 60482..60904 | + | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE24_RS23310 (LOE24_23275) | 60901..61560 | + | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE24_RS23315 (LOE24_23280) | 61584..62051 | + | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE24_RS23320 (LOE24_23285) | 62051..62677 | + | 627 | WP_028095367.1 | SCO family protein | - |
| LOE24_RS23325 (LOE24_23290) | 62674..64047 | + | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE24_RS23330 (LOE24_23295) | 64051..64506 | + | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE24_RS23335 (LOE24_23300) | 64519..65301 | + | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE24_RS23340 (LOE24_23305) | 65330..65788 | + | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE24_RS23345 (LOE24_23310) | 65755..67368 | + | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE24_RS23350 (LOE24_23315) | 67359..67526 | + | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE24_RS23355 (LOE24_23320) | 67587..69488 | + | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE24_RS23360 (LOE24_23325) | 69485..70486 | + | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE24_RS23365 (LOE24_23330) | 70706..71218 | - | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE24_RS23370 (LOE24_23335) | 71401..71667 | - | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE24_RS23375 (LOE24_23340) | 71702..74056 | - | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE24_RS23380 (LOE24_23345) | 74239..74523 | + | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE24_RS23385 (LOE24_23350) | 74571..75233 | - | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE24_RS23390 (LOE24_23355) | 75525..75977 | - | 453 | WP_224557528.1 | cytochrome c | - |
| LOE24_RS23395 (LOE24_23360) | 76039..76533 | - | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE24_RS23400 (LOE24_23365) | 76533..77462 | - | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE24_RS23405 (LOE24_23370) | 77480..78925 | - | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE24_RS23410 (LOE24_23375) | 79087..79536 | + | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE24_RS23415 (LOE24_23380) | 79531..79983 | - | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE24_RS23420 (LOE24_23385) | 80310..81308 | + | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE24_RS23425 (LOE24_23390) | 81305..82486 | + | 1182 | WP_224557529.1 | metal transporter | - |
| LOE24_RS23430 (LOE24_23395) | 82814..83812 | - | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE24_RS23435 (LOE24_23400) | 83973..85607 | + | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE24_RS23440 (LOE24_23405) | 85624..86490 | + | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE24_RS23445 (LOE24_23410) | 87514..88125 | - | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE24_RS23450 (LOE24_23415) | 88173..89057 | - | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE24_RS23455 (LOE24_23420) | 89186..90325 | + | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE24_RS23460 (LOE24_23425) | 90427..90918 | + | 492 | Protein_93 | recombinase family protein | - |
| LOE24_RS23465 (LOE24_23430) | 90997..91392 | - | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE24_RS23470 (LOE24_23435) | 91382..91609 | - | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE24_RS23475 (LOE24_23440) | 91818..93011 | + | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE24_RS23480 (LOE24_23445) | 92995..93927 | + | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE24_RS23485 (LOE24_23450) | 94141..95352 | + | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE24_RS23490 (LOE24_23455) | 95521..97282 | + | 1762 | Protein_99 | ParB N-terminal domain-containing protein | - |
| LOE24_RS23495 (LOE24_23460) | 97439..98806 | - | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE24_RS23500 (LOE24_23465) | 98803..99462 | - | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE24_RS23505 (LOE24_23470) | 99608..99925 | + | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE24_RS23510 (LOE24_23475) | 99882..101267 | + | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE24_RS23515 (LOE24_23480) | 101448..101828 | + | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE24_RS23520 (LOE24_23485) | 101864..102334 | + | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE24_RS23525 (LOE24_23490) | 102346..104553 | + | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE24_RS23530 (LOE24_23495) | 104534..105514 | + | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE24_RS23535 (LOE24_23500) | 105520..107427 | + | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE24_RS23540 (LOE24_23505) | 107424..108125 | + | 702 | WP_028288616.1 | VIT family protein | - |
| LOE24_RS23545 (LOE24_23510) | 108261..108422 | + | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE24_RS23550 (LOE24_23515) | 108451..108744 | - | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE24_RS23555 (LOE24_23520) | 109097..109567 | + | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE24_RS23560 (LOE24_23525) | 109608..110546 | + | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|