MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82375 bp
Accession: NZ_CP086823 Location: 1..82375 Organism: Pseudosulfitobacter pseudonitzschiae strain TC12-52 Replicon: plasmid P7
Accession: NZ_CP086823 Location: 1..82375 Organism: Pseudosulfitobacter pseudonitzschiae strain TC12-52 Replicon: plasmid P7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE26_RS24410 (LOE26_24405) | 392..2266 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE26_RS24415 (LOE26_24410) | 2352..3314 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE26_RS24420 (LOE26_24415) | 3581..4333 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE26_RS24425 (LOE26_24420) | 4330..5115 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE26_RS24430 (LOE26_24425) | 5108..5803 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE26_RS24435 (LOE26_24430) | 5819..6535 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE26_RS24440 (LOE26_24435) | 6545..6862 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE26_RS24445 (LOE26_24440) | 6893..8341 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE26_RS24450 (LOE26_24445) | 8338..9102 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE26_RS24455 (LOE26_24450) | 9146..10075 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE26_RS24460 (LOE26_24455) | 10072..11214 | - | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE26_RS24465 (LOE26_24460) | 11290..14181 | - | 2892 | WP_224558003.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE26_RS24470 (LOE26_24465) | 14347..14934 | + | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE26_RS24475 (LOE26_24470) | 15013..15831 | - | 819 | Protein_14 | GTP-binding protein | - |
| LOE26_RS24480 (LOE26_24475) | 16170..16403 | - | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE26_RS24485 (LOE26_24480) | 16532..16837 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE26_RS24490 (LOE26_24485) | 16824..17753 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE26_RS24495 (LOE26_24490) | 17984..18412 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE26_RS24500 (LOE26_24495) | 18472..19110 | + | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE26_RS24505 (LOE26_24500) | 19212..20426 | + | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE26_RS24510 (LOE26_24505) | 20490..21464 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE26_RS24515 (LOE26_24510) | 21470..23005 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE26_RS24520 (LOE26_24515) | 23267..25006 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE26_RS24525 (LOE26_24520) | 25017..25922 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE26_RS24530 (LOE26_24525) | 25993..26286 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE26_RS24535 (LOE26_24530) | 26279..26554 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE26_RS24540 (LOE26_24535) | 27023..27793 | - | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE26_RS24545 (LOE26_24540) | 27885..29432 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE26_RS24550 (LOE26_24545) | 29449..30765 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE26_RS24555 (LOE26_24550) | 30765..31943 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE26_RS24560 (LOE26_24555) | 32142..32837 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE26_RS24565 (LOE26_24560) | 33128..34006 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE26_RS24570 (LOE26_24565) | 34003..35058 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE26_RS24575 (LOE26_24570) | 35055..35615 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE26_RS24580 (LOE26_24575) | 35704..36621 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE26_RS24585 (LOE26_24580) | 36658..37584 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE26_RS24590 (LOE26_24585) | 37584..39326 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE26_RS24595 (LOE26_24590) | 39339..40535 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE26_RS24600 (LOE26_24595) | 40548..42068 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE26_RS24605 (LOE26_24600) | 42150..43214 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE26_RS24610 (LOE26_24605) | 43383..44315 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE26_RS24615 (LOE26_24610) | 44405..44707 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE26_RS24620 (LOE26_24615) | 44719..45585 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE26_RS24625 (LOE26_24620) | 45994..46950 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE26_RS24630 (LOE26_24625) | 47080..48603 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE26_RS24635 (LOE26_24630) | 48772..50607 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE26_RS24640 (LOE26_24635) | 50816..51502 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE26_RS24645 (LOE26_24640) | 51499..52206 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE26_RS24650 (LOE26_24645) | 52319..53074 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE26_RS24655 (LOE26_24650) | 53649..55238 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE26_RS24660 (LOE26_24655) | 55235..56671 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE26_RS24665 (LOE26_24660) | 56808..57818 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE26_RS24670 (LOE26_24665) | 58444..59646 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE26_RS24675 (LOE26_24670) | 59643..60623 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE26_RS24680 (LOE26_24675) | 60722..62794 | - | 2073 | WP_224557590.1 | caspase family protein | - |
| LOE26_RS24685 (LOE26_24680) | 62806..63426 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE26_RS24690 (LOE26_24685) | 63623..64867 | + | 1245 | WP_224557592.1 | trypsin-like peptidase domain-containing protein | - |
| LOE26_RS24695 (LOE26_24690) | 64860..65555 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE26_RS24700 (LOE26_24695) | 65552..66877 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE26_RS24705 (LOE26_24700) | 66919..68373 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE26_RS24710 (LOE26_24705) | 68531..69118 | - | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE26_RS24715 (LOE26_24710) | 69406..69969 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE26_RS24720 (LOE26_24715) | 70133..72103 | + | 1971 | WP_224557597.1 | caspase family protein | - |
| LOE26_RS24725 (LOE26_24720) | 72109..73155 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE26_RS24730 (LOE26_24725) | 73125..75851 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE26_RS24735 (LOE26_24730) | 75990..76697 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE26_RS24740 (LOE26_24735) | 76706..78379 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE26_RS24745 (LOE26_24740) | 78795..79424 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE26_RS24750 (LOE26_24745) | 79448..80890 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|