MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 37721 bp
Accession: NZ_CP086815 Location: 1..37721 Organism: Pseudosulfitobacter pseudonitzschiae strain TC12-54 Replicon: plasmid P7
Accession: NZ_CP086815 Location: 1..37721 Organism: Pseudosulfitobacter pseudonitzschiae strain TC12-54 Replicon: plasmid P7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE27_RS23940 (LOE27_23920) | 171..890 | + | 720 | WP_229940890.1 | hypothetical protein | - |
| LOE27_RS23945 (LOE27_23925) | 1047..1646 | - | 600 | WP_012187123.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE27_RS23950 (LOE27_23930) | 1827..3278 | + | 1452 | WP_229941942.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE27_RS23955 (LOE27_23935) | 3275..4099 | + | 825 | WP_224557641.1 | AAA family ATPase | - |
| LOE27_RS23960 (LOE27_23940) | 4231..4860 | + | 630 | WP_224557677.1 | IS91 family transposase ISMno23 | Transposase |
| LOE27_RS23965 (LOE27_23945) | 4923..5107 | + | 185 | Protein_6 | WGR domain-containing protein | - |
| LOE27_RS23970 (LOE27_23950) | 5271..6152 | + | 882 | WP_224557676.1 | hypothetical protein | - |
| LOE27_RS23975 (LOE27_23955) | 6145..7074 | + | 930 | WP_224557674.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| LOE27_RS23980 (LOE27_23960) | 7078..10266 | + | 3189 | WP_224557672.1 | N-6 DNA methylase | - |
| LOE27_RS23985 (LOE27_23965) | 10509..11273 | + | 765 | WP_229940891.1 | Bro-N domain-containing protein | - |
| LOE27_RS23990 (LOE27_23970) | 11448..12332 | - | 885 | WP_224557668.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE27_RS23995 (LOE27_23975) | 12767..13381 | - | 615 | WP_224557666.1 | hypothetical protein | - |
| LOE27_RS24000 (LOE27_23980) | 13806..14198 | - | 393 | WP_224557664.1 | hypothetical protein | - |
| LOE27_RS24005 (LOE27_23985) | 14927..15508 | - | 582 | Protein_14 | Mobilization protein A | Relaxase |
| LOE27_RS24010 (LOE27_23990) | 15743..16030 | + | 288 | WP_224557660.1 | hypothetical protein | - |
| LOE27_RS24015 (LOE27_23995) | 16063..17871 | + | 1809 | WP_229942714.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LOE27_RS24020 (LOE27_24000) | 18086..19120 | + | 1035 | WP_151654626.1 | replication initiator protein A | - |
| LOE27_RS24025 (LOE27_24005) | 19235..19903 | + | 669 | WP_151654624.1 | Protein virC1 | VF |
| LOE27_RS24030 (LOE27_24010) | 20546..20737 | + | 192 | WP_224557658.1 | hypothetical protein | - |
| LOE27_RS24035 (LOE27_24015) | 20771..21814 | + | 1044 | WP_224557657.1 | IS5 family transposase ISPmar3 | Transposase |
| LOE27_RS24040 (LOE27_24020) | 22057..22323 | - | 267 | WP_224557656.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| LOE27_RS24045 (LOE27_24025) | 22320..22571 | - | 252 | WP_036743750.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| LOE27_RS24050 (LOE27_24030) | 22678..23364 | - | 687 | WP_224557655.1 | helix-turn-helix transcriptional regulator | - |
| LOE27_RS24055 (LOE27_24035) | 23536..24600 | - | 1065 | WP_224557654.1 | AraC family transcriptional regulator | - |
| LOE27_RS24060 (LOE27_24040) | 24938..26119 | + | 1182 | WP_229940888.1 | ABC transporter substrate-binding protein | - |
| LOE27_RS24065 (LOE27_24045) | 26138..27049 | + | 912 | WP_229940889.1 | branched-chain amino acid ABC transporter permease | - |
| LOE27_RS24070 (LOE27_24050) | 27046..28002 | + | 957 | WP_224557652.1 | branched-chain amino acid ABC transporter permease | - |
| LOE27_RS24075 (LOE27_24055) | 27999..28748 | + | 750 | WP_224557651.1 | ABC transporter ATP-binding protein | - |
| LOE27_RS24080 (LOE27_24060) | 28745..29446 | + | 702 | WP_224557650.1 | ABC transporter ATP-binding protein | - |
| LOE27_RS24085 (LOE27_24065) | 29456..30688 | + | 1233 | WP_224557649.1 | thiolase family protein | - |
| LOE27_RS24090 (LOE27_24070) | 30700..32250 | + | 1551 | WP_224557648.1 | AMP-binding protein | - |
| LOE27_RS24095 (LOE27_24075) | 32260..33759 | + | 1500 | WP_224557647.1 | AMP-binding protein | - |
| LOE27_RS24100 (LOE27_24080) | 33784..34965 | + | 1182 | WP_224557646.1 | lipid-transfer protein | - |
| LOE27_RS24105 (LOE27_24085) | 34980..35771 | + | 792 | WP_224557645.1 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | VF |
| LOE27_RS24110 (LOE27_24090) | 36033..36398 | + | 366 | WP_224557644.1 | MerR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|