MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82232 bp
Accession: NZ_CP086814 Location: 1..82232 Organism: Pseudosulfitobacter pseudonitzschiae strain TC12-54 Replicon: plasmid P6
Accession: NZ_CP086814 Location: 1..82232 Organism: Pseudosulfitobacter pseudonitzschiae strain TC12-54 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE27_RS23590 (LOE27_23570) | 1494..2540 | - | 1047 | WP_081855458.1 | serine protease | - |
| LOE27_RS23595 (LOE27_23575) | 2546..4519 | - | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE27_RS23600 (LOE27_23580) | 4680..5243 | - | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE27_RS23605 (LOE27_23585) | 5531..6118 | + | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE27_RS23610 (LOE27_23590) | 6276..7730 | - | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE27_RS23615 (LOE27_23595) | 7772..9097 | - | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE27_RS23620 (LOE27_23600) | 9094..9789 | - | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE27_RS23625 (LOE27_23605) | 9782..11032 | - | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE27_RS23630 (LOE27_23610) | 11223..11843 | + | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE27_RS23635 (LOE27_23615) | 11843..13927 | + | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE27_RS23640 (LOE27_23620) | 14026..15006 | - | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE27_RS23645 (LOE27_23625) | 15003..16205 | - | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE27_RS23650 (LOE27_23630) | 16831..17841 | + | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE27_RS23655 (LOE27_23635) | 17978..19414 | - | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE27_RS23660 (LOE27_23640) | 19411..21036 | - | 1626 | WP_229997211.1 | CHAT domain-containing protein | - |
| LOE27_RS23665 (LOE27_23645) | 21575..22330 | - | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE27_RS23670 (LOE27_23650) | 22443..23150 | + | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE27_RS23675 (LOE27_23655) | 23147..23833 | + | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE27_RS23680 (LOE27_23660) | 24042..25877 | - | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE27_RS23685 (LOE27_23665) | 26046..27569 | - | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE27_RS23690 (LOE27_23670) | 27699..28655 | - | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE27_RS23695 (LOE27_23675) | 29064..29930 | - | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE27_RS23700 (LOE27_23680) | 29942..30244 | - | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE27_RS23705 (LOE27_23685) | 30334..31266 | - | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE27_RS23710 (LOE27_23690) | 31435..32499 | + | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE27_RS23715 (LOE27_23695) | 32581..34101 | + | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE27_RS23720 (LOE27_23700) | 34114..35310 | + | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE27_RS23725 (LOE27_23705) | 35323..37065 | + | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE27_RS23730 (LOE27_23710) | 37065..37991 | + | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE27_RS23735 (LOE27_23715) | 38028..38945 | + | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE27_RS23740 (LOE27_23720) | 39034..39594 | + | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE27_RS23745 (LOE27_23725) | 39591..40646 | + | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE27_RS23750 (LOE27_23730) | 40643..41521 | + | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE27_RS23755 (LOE27_23735) | 41812..42507 | + | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE27_RS23760 (LOE27_23740) | 42706..43884 | - | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE27_RS23765 (LOE27_23745) | 43884..45200 | - | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE27_RS23770 (LOE27_23750) | 45217..46764 | - | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE27_RS23775 (LOE27_23755) | 46856..47626 | + | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE27_RS23780 (LOE27_23760) | 48095..48370 | - | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE27_RS23785 (LOE27_23765) | 48363..48656 | - | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE27_RS23790 (LOE27_23770) | 48727..49632 | - | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE27_RS23795 (LOE27_23775) | 49643..51382 | - | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE27_RS23800 (LOE27_23780) | 51644..53179 | + | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE27_RS23805 (LOE27_23785) | 53185..54159 | + | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE27_RS23810 (LOE27_23790) | 54223..55437 | - | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE27_RS23815 (LOE27_23795) | 55539..56177 | - | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE27_RS23820 (LOE27_23800) | 56237..56665 | + | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE27_RS23825 (LOE27_23805) | 56896..57825 | - | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE27_RS23830 (LOE27_23810) | 57812..58117 | - | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE27_RS23835 (LOE27_23815) | 58246..58479 | + | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE27_RS23840 (LOE27_23820) | 58818..59636 | + | 819 | Protein_51 | GTP-binding protein | - |
| LOE27_RS23845 (LOE27_23825) | 59715..60302 | - | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE27_RS23850 (LOE27_23830) | 60469..63360 | + | 2892 | Protein_53 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE27_RS23855 (LOE27_23835) | 63436..64578 | + | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE27_RS23860 (LOE27_23840) | 64575..65504 | + | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE27_RS23865 (LOE27_23845) | 65548..66312 | + | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE27_RS23870 (LOE27_23850) | 66309..67757 | + | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE27_RS23875 (LOE27_23855) | 67788..68105 | - | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE27_RS23880 (LOE27_23860) | 68115..68831 | - | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE27_RS23885 (LOE27_23865) | 68847..69542 | - | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE27_RS23890 (LOE27_23870) | 69535..70320 | - | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE27_RS23895 (LOE27_23875) | 70317..71069 | - | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE27_RS23900 (LOE27_23880) | 71336..72298 | + | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE27_RS23905 (LOE27_23885) | 72384..74258 | + | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE27_RS23910 (LOE27_23890) | 74280..75965 | + | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE27_RS23915 (LOE27_23895) | 75991..77433 | + | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE27_RS23920 (LOE27_23900) | 77457..78086 | + | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE27_RS23925 (LOE27_23905) | 78502..80175 | - | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE27_RS23930 (LOE27_23910) | 80184..80891 | - | 708 | WP_143186815.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|