MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 157665 bp
Accession: NZ_CP086802 Location: 1..157665 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-47 Replicon: plasmid P4
Accession: NZ_CP086802 Location: 1..157665 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-47 Replicon: plasmid P4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE37_RS20745 (LOE37_20740) | 1128..1532 | + | 405 | WP_229939178.1 | Lrp/AsnC ligand binding domain-containing protein | - |
| LOE37_RS20750 (LOE37_20745) | 1551..2336 | - | 786 | WP_229939180.1 | zinc-binding dehydrogenase | - |
| LOE37_RS20760 (LOE37_20755) | 4287..5351 | + | 1065 | WP_224557894.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
| LOE37_RS20765 (LOE37_20760) | 5348..7576 | + | 2229 | WP_224557893.1 | glycosyltransferase | - |
| LOE37_RS20770 (LOE37_20765) | 7860..8888 | + | 1029 | WP_224557892.1 | IS110 family transposase ISPko7 | Transposase |
| LOE37_RS20775 (LOE37_20770) | 9208..10132 | + | 925 | Protein_7 | IS5 family transposase ISUnCu15 | Transposase |
| LOE37_RS20780 (LOE37_20775) | 10135..10347 | - | 213 | WP_224557891.1 | hypothetical protein | - |
| LOE37_RS20785 (LOE37_20780) | 10344..10838 | - | 495 | WP_224557890.1 | hypothetical protein | - |
| LOE37_RS20790 (LOE37_20785) | 10877..13177 | - | 2301 | WP_224557889.1 | VWA domain-containing protein | - |
| LOE37_RS20795 (LOE37_20790) | 13174..14145 | - | 972 | WP_224557888.1 | hypothetical protein | - |
| LOE37_RS20800 (LOE37_20795) | 14169..14693 | - | 525 | WP_224557886.1 | hypothetical protein | - |
| LOE37_RS20805 (LOE37_20800) | 14690..15217 | - | 528 | WP_224557885.1 | hypothetical protein | - |
| LOE37_RS20810 (LOE37_20805) | 15214..15693 | - | 480 | WP_224557884.1 | hypothetical protein | - |
| LOE37_RS20815 (LOE37_20810) | 15702..16274 | - | 573 | WP_224557883.1 | hypothetical protein | - |
| LOE37_RS20820 (LOE37_20815) | 16276..16827 | - | 552 | WP_224557882.1 | hypothetical protein | - |
| LOE37_RS20825 (LOE37_20820) | 16964..17446 | + | 483 | WP_224557881.1 | molybdopterin-dependent oxidoreductase | - |
| LOE37_RS20830 (LOE37_20825) | 17443..18780 | + | 1338 | WP_224557880.1 | HAMP domain-containing sensor histidine kinase | - |
| LOE37_RS20835 (LOE37_20830) | 18777..19742 | + | 966 | WP_224557879.1 | Transcriptional regulatory protein AfsQ1 | VF |
| LOE37_RS20840 (LOE37_20835) | 19817..20242 | - | 426 | WP_224557878.1 | hypothetical protein | - |
| LOE37_RS20845 (LOE37_20840) | 20368..21387 | + | 1020 | WP_224557877.1 | IS110 family transposase ISAzs4 | Transposase |
| LOE37_RS20850 (LOE37_20845) | 21742..22602 | - | 861 | WP_224557876.1 | LysR family transcriptional regulator | - |
| LOE37_RS20855 (LOE37_20850) | 22759..23478 | + | 720 | WP_224557875.1 | hypothetical protein | - |
| LOE37_RS20860 (LOE37_20855) | 23679..24098 | - | 420 | WP_229940658.1 | hypothetical protein | - |
| LOE37_RS20865 (LOE37_20860) | 24159..24790 | + | 632 | Protein_25 | IS3 family transposase ISPko4 | Transposase |
| LOE37_RS20870 (LOE37_20865) | 24856..25613 | + | 758 | WP_156127956.1 | IS5 family transposase IS1248A | Transposase |
| LOE37_RS20875 (LOE37_20870) | 25680..26528 | - | 849 | WP_229940659.1 | CoA ester lyase | - |
| LOE37_RS20880 (LOE37_20875) | 26607..27836 | - | 1230 | WP_043755120.1 | CoA transferase | - |
| LOE37_RS20885 (LOE37_20880) | 27833..28318 | - | 486 | WP_043755138.1 | MaoC family dehydratase | - |
| LOE37_RS20890 (LOE37_20885) | 28329..29564 | - | 1236 | WP_043755124.1 | acyl-CoA dehydrogenase family protein | - |
| LOE37_RS20895 (LOE37_20890) | 29561..30055 | - | 495 | WP_043755128.1 | MaoC family dehydratase | - |
| LOE37_RS20900 (LOE37_20895) | 30052..31395 | - | 1344 | WP_224557915.1 | MmgE/PrpD family protein | - |
| LOE37_RS20905 (LOE37_20900) | 31385..32665 | - | 1281 | WP_052418558.1 | TRAP transporter large permease | - |
| LOE37_RS20910 (LOE37_20905) | 32665..33210 | - | 546 | WP_081979733.1 | TRAP transporter small permease | - |
| LOE37_RS20915 (LOE37_20910) | 33276..34274 | - | 999 | WP_052418559.1 | TRAP transporter substrate-binding protein DctP | - |
| LOE37_RS20920 (LOE37_20915) | 34423..35343 | - | 921 | WP_043755133.1 | HTH-type transcriptional regulator GltC | VF |
| LOE37_RS20925 (LOE37_20920) | 35374..36093 | - | 720 | WP_229939243.1 | LysR substrate-binding domain-containing protein | - |
| LOE37_RS20930 (LOE37_20925) | 36034..36480 | + | 447 | Protein_38 | IS6 family transposase | - |
| LOE37_RS20935 (LOE37_20930) | 36457..39126 | - | 2670 | WP_229939218.1 | strawberry notch family protein | - |
| LOE37_RS20940 (LOE37_20935) | 39352..40461 | - | 1110 | WP_224558030.1 | IS110 family transposase ISEc45 | Transposase |
| LOE37_RS20945 (LOE37_20940) | 40563..40943 | - | 381 | Protein_41 | hypothetical protein | - |
| LOE37_RS20950 (LOE37_20945) | 41120..41413 | + | 294 | WP_067297285.1 | hypothetical protein | - |
| LOE37_RS20955 (LOE37_20950) | 41936..42637 | - | 702 | WP_067297288.1 | RES family NAD+ phosphorylase | - |
| LOE37_RS20960 (LOE37_20955) | 42634..43035 | - | 402 | WP_067297291.1 | MbcA/ParS/Xre antitoxin family protein | - |
| LOE37_RS20965 (LOE37_20960) | 43094..43738 | - | 645 | WP_121066445.1 | antitoxin of toxin-antitoxin stability system | - |
| LOE37_RS20970 (LOE37_20965) | 43731..44150 | - | 420 | WP_067297244.1 | hypothetical protein | - |
| LOE37_RS20975 (LOE37_20970) | 44226..44423 | - | 198 | WP_047998245.1 | hypothetical protein | - |
| LOE37_RS20980 (LOE37_20975) | 44425..44802 | - | 378 | WP_114276348.1 | hypothetical protein | - |
| LOE37_RS20985 (LOE37_20980) | 44813..45304 | - | 492 | WP_067297141.1 | hypothetical protein | - |
| LOE37_RS20990 (LOE37_20985) | 45408..45926 | - | 519 | WP_114276373.1 | DNA repair protein RadC | - |
| LOE37_RS20995 (LOE37_20990) | 46036..46476 | - | 441 | WP_114276349.1 | DNA repair protein RadC | - |
| LOE37_RS21000 (LOE37_20995) | 46604..47803 | - | 1200 | WP_121066443.1 | DUF932 domain-containing protein | - |
| LOE37_RS21005 (LOE37_21000) | 47941..48846 | - | 906 | WP_114276002.1 | hypothetical protein | - |
| LOE37_RS21010 (LOE37_21005) | 48886..49482 | + | 597 | WP_037954955.1 | hypothetical protein | - |
| LOE37_RS21015 (LOE37_21010) | 49537..49941 | - | 405 | WP_009827211.1 | single-stranded DNA-binding protein | - |
| LOE37_RS21020 (LOE37_21015) | 50361..50648 | + | 288 | WP_009827212.1 | H-NS histone family protein | - |
| LOE37_RS21025 (LOE37_21020) | 50658..52103 | - | 1446 | WP_114276004.1 | hypothetical protein | - |
| LOE37_RS21030 (LOE37_21025) | 52342..52506 | - | 165 | WP_007803240.1 | hypothetical protein | - |
| LOE37_RS21035 (LOE37_21030) | 52890..53363 | - | 474 | WP_114276003.1 | hypothetical protein | - |
| LOE37_RS21040 (LOE37_21035) | 53463..55640 | - | 2178 | WP_224556256.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE37_RS21045 (LOE37_21040) | 55931..56974 | - | 1044 | WP_114276417.1 | IS5 family transposase ISPmar3 | Transposase |
| LOE37_RS21050 (LOE37_21045) | 57040..58197 | - | 1158 | WP_121066480.1 | helix-turn-helix domain-containing protein | - |
| LOE37_RS21055 (LOE37_21050) | 58437..59396 | - | 960 | WP_121066477.1 | plasmid partitioning protein RepB | - |
| LOE37_RS21060 (LOE37_21055) | 59386..60588 | - | 1203 | WP_089852475.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE37_RS21065 (LOE37_21060) | 61030..61917 | - | 888 | WP_114273238.1 | Tn3 family transposase ISPsy42 | Transposase |
| LOE37_RS21070 (LOE37_21065) | 62122..65460 | + | 3339 | WP_224556255.1 | DEAD/DEAH box helicase | - |
| LOE37_RS21075 (LOE37_21070) | 65564..66658 | - | 1095 | WP_224556253.1 | tyrosine-type recombinase/integrase | - |
| LOE37_RS21080 (LOE37_21075) | 66817..67701 | + | 885 | WP_229939227.1 | DUF1403 family protein | - |
| LOE37_RS21085 (LOE37_21080) | 67705..68301 | + | 597 | WP_109535033.1 | SMC-Scp complex subunit ScpB | - |
| LOE37_RS21090 (LOE37_21085) | 69325..70191 | - | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE37_RS21095 (LOE37_21090) | 70208..71842 | - | 1635 | WP_229939245.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE37_RS21100 (LOE37_21095) | 72143..73900 | - | 1758 | WP_224557756.1 | alpha/beta hydrolase | - |
| LOE37_RS21105 (LOE37_21100) | 74214..76145 | + | 1932 | WP_229941949.1 | VWA domain-containing protein | - |
| LOE37_RS21110 (LOE37_21105) | 76163..77026 | + | 864 | WP_224557754.1 | hypothetical protein | - |
| LOE37_RS21115 (LOE37_21110) | 77039..77560 | + | 522 | WP_224557753.1 | hypothetical protein | - |
| LOE37_RS21120 (LOE37_21115) | 78162..79121 | + | 960 | WP_224557752.1 | hypothetical protein | - |
| LOE37_RS21125 (LOE37_21120) | 79295..80614 | - | 1320 | WP_224557751.1 | MFS transporter | - |
| LOE37_RS21130 (LOE37_21125) | 80623..80883 | - | 261 | WP_007120627.1 | metal-sensing transcriptional repressor | - |
| LOE37_RS21135 (LOE37_21130) | 81385..82113 | + | 729 | WP_224557750.1 | HupE/UreJ family protein | - |
| LOE37_RS21140 (LOE37_21135) | 82131..82754 | + | 624 | WP_037929504.1 | hypothetical protein | - |
| LOE37_RS21145 (LOE37_21140) | 82966..83319 | + | 354 | WP_224557748.1 | hypothetical protein | - |
| LOE37_RS21150 (LOE37_21145) | 83410..84849 | + | 1440 | WP_082899302.1 | multicopper oxidase family protein | - |
| LOE37_RS21155 (LOE37_21150) | 84890..85345 | + | 456 | WP_037929510.1 | DUF411 domain-containing protein | - |
| LOE37_RS23790 | 85412..85546 | + | 135 | WP_263481059.1 | hypothetical protein | - |
| LOE37_RS21160 (LOE37_21155) | 85696..86121 | + | 426 | WP_224557746.1 | cytochrome c | - |
| LOE37_RS21165 (LOE37_21160) | 86118..86714 | + | 597 | WP_037929514.1 | DsbE family thiol:disulfide interchange protein | - |
| LOE37_RS21170 (LOE37_21165) | 86711..87223 | + | 513 | WP_037929516.1 | TlpA disulfide reductase family protein | - |
| LOE37_RS21175 (LOE37_21170) | 87306..87596 | + | 291 | WP_037929519.1 | hypothetical protein | - |
| LOE37_RS21180 (LOE37_21175) | 87596..88300 | + | 705 | WP_037929522.1 | SCO family protein | - |
| LOE37_RS21185 (LOE37_21180) | 88297..88788 | + | 492 | WP_081855445.1 | hypothetical protein | - |
| LOE37_RS21190 (LOE37_21185) | 88785..89525 | + | 741 | WP_037929528.1 | cytochrome c biogenesis protein CcdA | - |
| LOE37_RS21195 (LOE37_21190) | 89522..90631 | - | 1110 | WP_224557743.1 | permease | - |
| LOE37_RS21200 (LOE37_21195) | 90718..91443 | - | 726 | WP_037929534.1 | glutaredoxin domain-containing protein | - |
| LOE37_RS21205 (LOE37_21200) | 91505..92374 | - | 870 | WP_037929537.1 | DUF305 domain-containing protein | - |
| LOE37_RS21210 (LOE37_21205) | 92482..92901 | - | 420 | WP_037929540.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE37_RS21215 (LOE37_21210) | 92921..95428 | - | 2508 | WP_067293079.1 | heavy metal translocating P-type ATPase | - |
| LOE37_RS21220 (LOE37_21215) | 95567..95776 | + | 210 | WP_037929722.1 | heavy-metal-associated domain-containing protein | - |
| LOE37_RS21225 (LOE37_21220) | 95949..96365 | + | 417 | WP_037929545.1 | hypothetical protein | - |
| LOE37_RS21230 (LOE37_21225) | 96439..96660 | + | 222 | WP_223865963.1 | hypothetical protein | - |
| LOE37_RS21235 (LOE37_21230) | 96660..98120 | + | 1461 | WP_067293082.1 | TolC family protein | - |
| LOE37_RS21240 (LOE37_21235) | 98132..99490 | + | 1359 | WP_224557742.1 | copper oxidase | - |
| LOE37_RS21245 (LOE37_21240) | 99537..100253 | + | 717 | WP_037929554.1 | copper-binding protein | - |
| LOE37_RS21250 (LOE37_21245) | 100363..100896 | + | 534 | WP_009820144.1 | plastocyanin/azurin family copper-binding protein | - |
| LOE37_RS21255 (LOE37_21250) | 100905..102209 | + | 1305 | WP_009820143.1 | ABC transporter transmembrane domain-containing protein | - |
| LOE37_RS21260 (LOE37_21255) | 102206..102664 | + | 459 | WP_037929563.1 | cytochrome c | - |
| LOE37_RS21265 (LOE37_21260) | 102761..104002 | + | 1242 | WP_224557739.1 | sialidase family protein | - |
| LOE37_RS21270 (LOE37_21265) | 104046..107201 | - | 3156 | WP_224557738.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| LOE37_RS21275 (LOE37_21270) | 107198..108634 | - | 1437 | WP_067293091.1 | Cation efflux system protein CusB | VF |
| LOE37_RS21280 (LOE37_21275) | 108631..109029 | - | 399 | WP_067293094.1 | FixH family protein | - |
| LOE37_RS21285 (LOE37_21280) | 109556..111883 | - | 2328 | WP_111550081.1 | Copper-transporting P-type ATPase | VF |
| LOE37_RS21290 (LOE37_21285) | 112100..114451 | + | 2352 | WP_190325599.1 | cation-translocating P-type ATPase | - |
| LOE37_RS21295 (LOE37_21290) | 114513..115013 | + | 501 | WP_067293139.1 | L,D-transpeptidase family protein | - |
| LOE37_RS21300 (LOE37_21295) | 115039..115203 | - | 165 | WP_170134538.1 | hypothetical protein | - |
| LOE37_RS21305 (LOE37_21300) | 115200..116735 | - | 1536 | WP_224557736.1 | apolipoprotein N-acyltransferase | - |
| LOE37_RS21310 (LOE37_21305) | 116742..117218 | - | 477 | WP_067293102.1 | signal peptidase II | - |
| LOE37_RS21315 (LOE37_21310) | 117222..118004 | - | 783 | WP_090270173.1 | ZIP family metal transporter | - |
| LOE37_RS21320 (LOE37_21315) | 118015..118467 | - | 453 | WP_067293107.1 | DUF411 domain-containing protein | - |
| LOE37_RS21325 (LOE37_21320) | 118488..119837 | - | 1350 | WP_224557735.1 | M23 family metallopeptidase | - |
| LOE37_RS21330 (LOE37_21325) | 119834..120454 | - | 621 | WP_224557759.1 | SCO family protein | - |
| LOE37_RS21335 (LOE37_21330) | 120466..120897 | - | 432 | WP_067293146.1 | copper chaperone PCu(A)C | - |
| LOE37_RS21340 (LOE37_21335) | 120968..121630 | - | 663 | WP_067293112.1 | thioredoxin domain-containing protein | - |
| LOE37_RS21345 (LOE37_21340) | 121627..122070 | - | 444 | WP_007120864.1 | disulfide bond formation protein B | - |
| LOE37_RS21350 (LOE37_21345) | 122067..122606 | - | 540 | WP_223865966.1 | SCO family protein | - |
| LOE37_RS21355 (LOE37_21350) | 122854..123282 | + | 429 | WP_224557734.1 | IS607 family transposase ISChh1 | Transposase |
| LOE37_RS21360 (LOE37_21355) | 123279..123605 | + | 327 | WP_067293118.1 | YnfA family protein | - |
| LOE37_RS21365 (LOE37_21360) | 123719..124336 | + | 618 | WP_024099354.1 | cation transporter | - |
| LOE37_RS21370 (LOE37_21365) | 124423..125193 | + | 771 | WP_067293121.1 | transglutaminase family protein | - |
| LOE37_RS21375 (LOE37_21370) | 125183..126091 | + | 909 | Protein_128 | cation diffusion facilitator family transporter | - |
| LOE37_RS21380 (LOE37_21375) | 126084..126641 | + | 558 | WP_040652314.1 | methyltransferase | - |
| LOE37_RS21385 (LOE37_21380) | 126750..127340 | + | 591 | WP_224557758.1 | L,D-transpeptidase | - |
| LOE37_RS21390 (LOE37_21385) | 127358..127627 | + | 270 | WP_111550076.1 | hypothetical protein | - |
| LOE37_RS21395 (LOE37_21390) | 127711..128376 | - | 666 | WP_067293124.1 | L,D-transpeptidase | - |
| LOE37_RS21400 (LOE37_21395) | 128631..129788 | - | 1158 | WP_229939233.1 | replication initiation protein RepC | - |
| LOE37_RS21405 (LOE37_21400) | 130009..130662 | - | 654 | WP_121066465.1 | hypothetical protein | - |
| LOE37_RS21410 (LOE37_21405) | 130748..131017 | - | 270 | WP_111550073.1 | hypothetical protein | - |
| LOE37_RS21415 (LOE37_21410) | 131215..131556 | + | 342 | WP_224557973.1 | hypothetical protein | - |
| LOE37_RS21420 (LOE37_21415) | 131606..132187 | + | 582 | WP_224557975.1 | lytic transglycosylase domain-containing protein | - |
| LOE37_RS21425 (LOE37_21420) | 132184..132468 | + | 285 | WP_224557971.1 | hypothetical protein | VF |
| LOE37_RS21430 (LOE37_21425) | 132492..132767 | + | 276 | WP_009819926.1 | VirB3 family type IV secretion system protein | - |
| LOE37_RS21435 (LOE37_21430) | 132868..135126 | + | 2259 | WP_229940657.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LOE37_RS21440 (LOE37_21435) | 135292..136380 | + | 1089 | WP_224557968.1 | lytic transglycosylase domain-containing protein | - |
| LOE37_RS21445 (LOE37_21440) | 136370..137179 | + | 810 | WP_224557967.1 | type IV secretion system protein | - |
| LOE37_RS21450 (LOE37_21445) | 137183..137671 | + | 489 | WP_229939238.1 | hypothetical protein | - |
| LOE37_RS21455 (LOE37_21450) | 137671..138672 | + | 1002 | WP_224557930.1 | type IV secretion system protein | - |
| LOE37_RS21460 (LOE37_21455) | 138675..139319 | + | 645 | WP_224557929.1 | Type IV secretion system protein PtlE | VF |
| LOE37_RS21465 (LOE37_21460) | 139323..140054 | + | 732 | WP_224557928.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| LOE37_RS21470 (LOE37_21465) | 140057..141514 | + | 1458 | WP_224557927.1 | Type IV secretion system protein PtlG | VF |
| LOE37_RS21475 (LOE37_21470) | 141625..142614 | + | 990 | WP_224557926.1 | Type IV secretion system protein VirB11 | VF |
| LOE37_RS21480 (LOE37_21475) | 142762..143010 | + | 249 | WP_229939240.1 | plasmid stabilization protein | Antitoxin Detail |
| LOE37_RS21485 (LOE37_21480) | 143014..143436 | + | 423 | WP_224557924.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LOE37_RS21490 (LOE37_21485) | 143433..146183 | + | 2751 | WP_224557923.1 | lactate dehydrogenase | - |
| LOE37_RS21495 (LOE37_21490) | 146180..147238 | + | 1059 | WP_224557922.1 | HEPN domain-containing protein | - |
| LOE37_RS21500 (LOE37_21495) | 147418..148872 | + | 1455 | WP_229941945.1 | ATP-binding protein | - |
| LOE37_RS21505 (LOE37_21500) | 149048..149374 | + | 327 | Protein_154 | DEAD/DEAH box helicase family protein | - |
| LOE37_RS21510 (LOE37_21505) | 149435..150097 | + | 663 | WP_224558010.1 | plasmid pRiA4b ORF-3 family protein | - |
| LOE37_RS21515 (LOE37_21510) | 150216..150797 | + | 582 | WP_224558009.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| LOE37_RS21520 (LOE37_21515) | 150824..152209 | + | 1386 | WP_224558008.1 | ISKra4 family transposase ISUnCu7 | Transposase |
| LOE37_RS21525 (LOE37_21520) | 152264..152461 | + | 198 | WP_224557951.1 | hypothetical protein | - |
| LOE37_RS21535 (LOE37_21530) | 154027..155037 | - | 1011 | WP_224557953.1 | NAD(P)-dependent alcohol dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|