MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82228 bp
Accession: NZ_CP086797 Location: 1..82228 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-67 Replicon: plasmid P7
Accession: NZ_CP086797 Location: 1..82228 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-67 Replicon: plasmid P7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE38_RS24180 (LOE38_24160) | 1142..2578 | - | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE38_RS24185 (LOE38_24165) | 2575..4164 | - | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE38_RS24190 (LOE38_24170) | 4739..5494 | - | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE38_RS24195 (LOE38_24175) | 5607..6314 | + | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE38_RS24200 (LOE38_24180) | 6311..6997 | + | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE38_RS24205 (LOE38_24185) | 7206..9041 | - | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE38_RS24210 (LOE38_24190) | 9210..10733 | - | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE38_RS24215 (LOE38_24195) | 10863..11819 | - | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE38_RS24220 (LOE38_24200) | 12228..13094 | - | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE38_RS24225 (LOE38_24205) | 13106..13408 | - | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE38_RS24230 (LOE38_24210) | 13498..14430 | - | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE38_RS24235 (LOE38_24215) | 14599..15663 | + | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE38_RS24240 (LOE38_24220) | 15745..17265 | + | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE38_RS24245 (LOE38_24225) | 17278..18474 | + | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE38_RS24250 (LOE38_24230) | 18487..20229 | + | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE38_RS24255 (LOE38_24235) | 20229..21155 | + | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE38_RS24260 (LOE38_24240) | 21192..22109 | + | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE38_RS24265 (LOE38_24245) | 22198..22758 | + | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE38_RS24270 (LOE38_24250) | 22755..23810 | + | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE38_RS24275 (LOE38_24255) | 23807..24685 | + | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE38_RS24280 (LOE38_24260) | 24976..25671 | + | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE38_RS24285 (LOE38_24265) | 25870..27048 | - | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE38_RS24290 (LOE38_24270) | 27048..28364 | - | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE38_RS24295 (LOE38_24275) | 28381..29928 | - | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE38_RS24300 (LOE38_24280) | 30020..30790 | + | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE38_RS24305 (LOE38_24285) | 31259..31534 | - | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE38_RS24310 (LOE38_24290) | 31527..31820 | - | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE38_RS24315 (LOE38_24295) | 31891..32796 | - | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE38_RS24320 (LOE38_24300) | 32807..34546 | - | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE38_RS24325 (LOE38_24305) | 34808..36343 | + | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE38_RS24330 (LOE38_24310) | 36349..37323 | + | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE38_RS24335 (LOE38_24315) | 37387..38601 | - | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE38_RS24340 (LOE38_24320) | 38703..39290 | - | 588 | WP_229940666.1 | TetR/AcrR family transcriptional regulator | - |
| LOE38_RS24345 (LOE38_24325) | 39401..39829 | + | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE38_RS24350 (LOE38_24330) | 40060..40989 | - | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE38_RS24355 (LOE38_24335) | 40976..41281 | - | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE38_RS24360 (LOE38_24340) | 41410..41643 | + | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE38_RS24365 (LOE38_24345) | 41982..42800 | + | 819 | Protein_38 | GTP-binding protein | - |
| LOE38_RS24370 (LOE38_24350) | 42879..43466 | - | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE38_RS24375 (LOE38_24355) | 43632..46520 | + | 2889 | Protein_40 | Tn3 family transposase | - |
| LOE38_RS24380 (LOE38_24360) | 46596..47738 | + | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE38_RS24385 (LOE38_24365) | 47735..48664 | + | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE38_RS24390 (LOE38_24370) | 48708..49472 | + | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE38_RS24395 (LOE38_24375) | 49469..50917 | + | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE38_RS24400 (LOE38_24380) | 50948..51265 | - | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE38_RS24405 (LOE38_24385) | 51275..51991 | - | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE38_RS24410 (LOE38_24390) | 52007..52702 | - | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE38_RS24415 (LOE38_24395) | 52695..53480 | - | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE38_RS24420 (LOE38_24400) | 53477..54229 | - | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE38_RS24425 (LOE38_24405) | 54496..55458 | + | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE38_RS24430 (LOE38_24410) | 55544..57418 | + | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE38_RS24435 (LOE38_24415) | 57440..59125 | + | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE38_RS24440 (LOE38_24420) | 59151..60593 | + | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE38_RS24445 (LOE38_24425) | 60617..61246 | + | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE38_RS24450 (LOE38_24430) | 61662..63335 | - | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE38_RS24455 (LOE38_24435) | 63344..64051 | - | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE38_RS24460 (LOE38_24440) | 64190..66916 | - | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE38_RS24465 (LOE38_24445) | 66886..67932 | - | 1047 | WP_081855458.1 | serine protease | - |
| LOE38_RS24470 (LOE38_24450) | 67938..69911 | - | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE38_RS24475 (LOE38_24455) | 70072..70635 | - | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE38_RS24480 (LOE38_24460) | 70923..71510 | + | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE38_RS24485 (LOE38_24465) | 71668..73122 | - | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE38_RS24490 (LOE38_24470) | 73164..74489 | - | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE38_RS24495 (LOE38_24475) | 74486..75181 | - | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE38_RS24500 (LOE38_24480) | 75174..76424 | - | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE38_RS24505 (LOE38_24485) | 76615..77235 | + | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE38_RS24510 (LOE38_24490) | 77235..79319 | + | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE38_RS24515 (LOE38_24495) | 79418..80398 | - | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE38_RS24520 (LOE38_24500) | 80395..81597 | - | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|