MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82233 bp
Accession: NZ_CP086789 Location: 1..82233 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-68 Replicon: plasmid P6
Accession: NZ_CP086789 Location: 1..82233 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-68 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE39_RS22820 (LOE39_22810) | 606..1169 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE39_RS22825 (LOE39_22815) | 1330..3303 | + | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE39_RS22830 (LOE39_22820) | 3309..4355 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE39_RS22835 (LOE39_22825) | 4325..7051 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE39_RS22840 (LOE39_22830) | 7190..7897 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE39_RS22845 (LOE39_22835) | 7906..9579 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE39_RS22850 (LOE39_22840) | 9995..10624 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE39_RS22855 (LOE39_22845) | 10648..12090 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE39_RS22860 (LOE39_22850) | 12116..13801 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE39_RS22865 (LOE39_22855) | 13823..15697 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE39_RS22870 (LOE39_22860) | 15783..16745 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE39_RS22875 (LOE39_22865) | 17012..17764 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE39_RS22880 (LOE39_22870) | 17761..18546 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE39_RS22885 (LOE39_22875) | 18539..19234 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE39_RS22890 (LOE39_22880) | 19250..19966 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE39_RS22895 (LOE39_22885) | 19976..20293 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE39_RS22900 (LOE39_22890) | 20324..21772 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE39_RS22905 (LOE39_22895) | 21769..22533 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE39_RS22910 (LOE39_22900) | 22577..23506 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE39_RS22915 (LOE39_22905) | 23503..24645 | - | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE39_RS22920 (LOE39_22910) | 24721..27611 | - | 2891 | Protein_21 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE39_RS22925 (LOE39_22915) | 27777..28364 | + | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE39_RS22930 (LOE39_22920) | 28443..29261 | - | 819 | Protein_23 | GTP-binding protein | - |
| LOE39_RS22935 (LOE39_22925) | 29600..29833 | - | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE39_RS22940 (LOE39_22930) | 29962..30267 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE39_RS22945 (LOE39_22935) | 30254..31183 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE39_RS22950 (LOE39_22940) | 31414..31842 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE39_RS22955 (LOE39_22945) | 31953..32540 | + | 588 | WP_229940666.1 | TetR/AcrR family transcriptional regulator | - |
| LOE39_RS22960 (LOE39_22950) | 32642..33856 | + | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE39_RS22965 (LOE39_22955) | 33920..34894 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE39_RS22970 (LOE39_22960) | 34900..36435 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE39_RS22975 (LOE39_22965) | 36697..38436 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE39_RS22980 (LOE39_22970) | 38447..39352 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE39_RS22985 (LOE39_22975) | 39423..39716 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE39_RS22990 (LOE39_22980) | 39709..39984 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE39_RS22995 (LOE39_22985) | 40453..41223 | - | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE39_RS23000 (LOE39_22990) | 41315..42862 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE39_RS23005 (LOE39_22995) | 42879..44195 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE39_RS23010 (LOE39_23000) | 44195..45373 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE39_RS23015 (LOE39_23005) | 45572..46267 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE39_RS23020 (LOE39_23010) | 46558..47436 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE39_RS23025 (LOE39_23015) | 47433..48488 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE39_RS23030 (LOE39_23020) | 48485..49045 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE39_RS23035 (LOE39_23025) | 49134..50051 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE39_RS23040 (LOE39_23030) | 50088..51014 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE39_RS23045 (LOE39_23035) | 51014..52756 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE39_RS23050 (LOE39_23040) | 52769..53965 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE39_RS23055 (LOE39_23045) | 53978..55498 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE39_RS23060 (LOE39_23050) | 55580..56644 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE39_RS23065 (LOE39_23055) | 56813..57745 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE39_RS23070 (LOE39_23060) | 57835..58137 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE39_RS23075 (LOE39_23065) | 58149..59015 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE39_RS23080 (LOE39_23070) | 59424..60380 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE39_RS23085 (LOE39_23075) | 60510..62033 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE39_RS23090 (LOE39_23080) | 62202..64037 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE39_RS23095 (LOE39_23085) | 64246..64932 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE39_RS23100 (LOE39_23090) | 64929..65636 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE39_RS23105 (LOE39_23095) | 65749..66504 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE39_RS23110 (LOE39_23100) | 67079..68668 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE39_RS23115 (LOE39_23105) | 68665..70101 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE39_RS23120 (LOE39_23110) | 70238..71248 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE39_RS23125 (LOE39_23115) | 71874..73076 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE39_RS23130 (LOE39_23120) | 73073..74053 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE39_RS23135 (LOE39_23125) | 74152..76224 | - | 2073 | WP_224557590.1 | caspase family protein | - |
| LOE39_RS23140 (LOE39_23130) | 76236..76856 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE39_RS23145 (LOE39_23135) | 77047..78297 | + | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE39_RS23150 (LOE39_23140) | 78290..78985 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE39_RS23155 (LOE39_23145) | 78982..80307 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE39_RS23160 (LOE39_23150) | 80349..81803 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|