MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110559 bp
Accession: NZ_CP086779 Location: 1..110559 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-69 Replicon: plasmid P4
Accession: NZ_CP086779 Location: 1..110559 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-69 Replicon: plasmid P4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE40_RS21025 (LOE40_20985) | 243..935 | + | 693 | WP_224557484.1 | regulator | - |
| LOE40_RS21030 (LOE40_20990) | 935..1588 | + | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE40_RS21035 (LOE40_20995) | 1712..2038 | + | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE40_RS21040 (LOE40_21000) | 2035..2552 | + | 518 | Protein_3 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE40_RS21045 (LOE40_21005) | 3091..3372 | - | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE40_RS21050 (LOE40_21010) | 3591..4720 | + | 1130 | WP_224557493.1 | IS3 family transposase ISRosp1 | Transposase |
| LOE40_RS21055 | 4747..5139 | + | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE40_RS21060 (LOE40_21020) | 5320..6141 | - | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE40_RS21065 (LOE40_21025) | 6138..7178 | - | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE40_RS21070 (LOE40_21030) | 7175..8110 | - | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE40_RS21075 (LOE40_21035) | 8115..8903 | - | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE40_RS21080 (LOE40_21040) | 8942..9943 | - | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE40_RS21085 (LOE40_21045) | 10041..10895 | - | 855 | WP_074838803.1 | VOC family protein | - |
| LOE40_RS21090 (LOE40_21050) | 10928..11782 | - | 855 | WP_224557497.1 | VOC family protein | - |
| LOE40_RS21095 (LOE40_21055) | 11790..12596 | - | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE40_RS21100 (LOE40_21060) | 12589..13389 | - | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE40_RS21105 (LOE40_21065) | 13386..14444 | - | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE40_RS21110 (LOE40_21070) | 14437..15309 | - | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE40_RS21115 (LOE40_21075) | 15336..16502 | - | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE40_RS21120 (LOE40_21080) | 16557..17243 | - | 687 | WP_170850597.1 | TetR/AcrR family transcriptional regulator | - |
| LOE40_RS21125 (LOE40_21085) | 17233..17559 | - | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE40_RS21130 (LOE40_21090) | 17556..18323 | - | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE40_RS21135 (LOE40_21095) | 18389..18904 | - | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE40_RS21140 (LOE40_21100) | 18901..20187 | - | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE40_RS21145 (LOE40_21105) | 20216..21418 | - | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE40_RS21150 (LOE40_21110) | 21581..22081 | + | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE40_RS21155 (LOE40_21115) | 22401..23567 | - | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE40_RS21160 (LOE40_21120) | 23564..25567 | - | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE40_RS21165 (LOE40_21125) | 25564..26358 | - | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE40_RS21170 (LOE40_21130) | 26368..27966 | - | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE40_RS21175 (LOE40_21135) | 28046..28660 | - | 615 | Protein_30 | IS21 family transposase ISPve1 | Transposase |
| LOE40_RS21180 (LOE40_21140) | 28657..30102 | - | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE40_RS21185 (LOE40_21145) | 30263..30541 | - | 279 | Protein_32 | IS1595 family transposase ISOan10 | Transposase |
| LOE40_RS21190 (LOE40_21150) | 30830..31597 | + | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE40_RS21195 (LOE40_21155) | 31633..32349 | - | 717 | WP_224557509.1 | methyltransferase | - |
| LOE40_RS21200 (LOE40_21160) | 33328..34257 | + | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE40_RS21205 (LOE40_21165) | 34796..35002 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE40_RS21210 (LOE40_21170) | 35555..36112 | + | 558 | WP_224557513.1 | transposase | - |
| LOE40_RS21215 (LOE40_21175) | 36099..38432 | + | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE40_RS21220 (LOE40_21180) | 38441..40441 | + | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE40_RS21225 (LOE40_21185) | 40559..41341 | - | 783 | Protein_40 | LysR family transcriptional regulator | - |
| LOE40_RS21230 (LOE40_21190) | 41325..41975 | - | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE40_RS21235 (LOE40_21195) | 42023..43381 | - | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE40_RS21240 (LOE40_21200) | 43393..44855 | - | 1463 | Protein_43 | TolC family protein | - |
| LOE40_RS21245 (LOE40_21205) | 45150..45566 | - | 417 | WP_230040108.1 | hypothetical protein | - |
| LOE40_RS21250 (LOE40_21210) | 45771..45971 | - | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE40_RS21255 (LOE40_21215) | 46112..48619 | + | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE40_RS21260 (LOE40_21220) | 48639..49058 | + | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE40_RS21265 (LOE40_21225) | 49182..50054 | + | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE40_RS21270 (LOE40_21230) | 50077..50841 | + | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE40_RS21275 (LOE40_21235) | 50942..51682 | - | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE40_RS21280 (LOE40_21240) | 51679..52170 | - | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE40_RS21285 (LOE40_21245) | 52167..52367 | - | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE40_RS21290 (LOE40_21250) | 52509..53474 | - | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE40_RS21295 (LOE40_21255) | 53464..54219 | - | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE40_RS21300 (LOE40_21260) | 54316..54894 | - | 579 | WP_028095362.1 | cation transporter | - |
| LOE40_RS21305 (LOE40_21265) | 54998..55426 | - | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE40_RS21310 (LOE40_21270) | 55634..56200 | + | 567 | WP_028095363.1 | SCO family protein | - |
| LOE40_RS21315 (LOE40_21275) | 56206..56628 | + | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE40_RS21320 (LOE40_21280) | 56625..57284 | + | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE40_RS21325 (LOE40_21285) | 57308..57775 | + | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE40_RS21330 (LOE40_21290) | 57775..58401 | + | 627 | WP_028095367.1 | SCO family protein | - |
| LOE40_RS21335 (LOE40_21295) | 58398..59771 | + | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE40_RS21340 (LOE40_21300) | 59775..60230 | + | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE40_RS21345 (LOE40_21305) | 60243..61025 | + | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE40_RS21350 (LOE40_21310) | 61054..61512 | + | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE40_RS21355 (LOE40_21315) | 61479..63092 | + | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE40_RS21360 (LOE40_21320) | 63083..63250 | + | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE40_RS21365 (LOE40_21325) | 63311..65212 | + | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE40_RS21370 (LOE40_21330) | 65209..66210 | + | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE40_RS21375 (LOE40_21335) | 66430..66942 | - | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE40_RS21380 (LOE40_21340) | 67125..67391 | - | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE40_RS21385 (LOE40_21345) | 67426..69780 | - | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE40_RS21390 (LOE40_21350) | 69963..70247 | + | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE40_RS21395 (LOE40_21355) | 70295..70957 | - | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE40_RS21400 (LOE40_21360) | 71249..71701 | - | 453 | WP_224557528.1 | cytochrome c | - |
| LOE40_RS21405 (LOE40_21365) | 71763..72257 | - | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE40_RS21410 (LOE40_21370) | 72257..73186 | - | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE40_RS21415 (LOE40_21375) | 73204..74649 | - | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE40_RS21420 (LOE40_21380) | 74811..75260 | + | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE40_RS21425 (LOE40_21385) | 75255..75707 | - | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE40_RS21430 (LOE40_21390) | 76034..77032 | + | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE40_RS21435 (LOE40_21395) | 77029..78210 | + | 1182 | WP_224557529.1 | metal transporter | - |
| LOE40_RS21440 (LOE40_21400) | 78538..79536 | - | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE40_RS21445 (LOE40_21405) | 79697..81331 | + | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE40_RS21450 (LOE40_21410) | 81348..82214 | + | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE40_RS21455 (LOE40_21415) | 83238..83849 | - | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE40_RS21460 (LOE40_21420) | 83897..84781 | - | 885 | WP_229997765.1 | DUF1403 family protein | - |
| LOE40_RS21465 (LOE40_21425) | 84908..86047 | + | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE40_RS21470 (LOE40_21430) | 86149..86640 | + | 492 | Protein_89 | recombinase family protein | - |
| LOE40_RS21475 (LOE40_21435) | 86719..87114 | - | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE40_RS21480 (LOE40_21440) | 87104..87331 | - | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE40_RS21485 (LOE40_21445) | 87540..88733 | + | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE40_RS21490 (LOE40_21450) | 88717..89649 | + | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE40_RS21495 (LOE40_21455) | 89863..91074 | + | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE40_RS21500 (LOE40_21460) | 91243..93004 | + | 1762 | Protein_95 | ParB N-terminal domain-containing protein | - |
| LOE40_RS21505 (LOE40_21465) | 93161..94528 | - | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE40_RS21510 (LOE40_21470) | 94525..95184 | - | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE40_RS21515 (LOE40_21475) | 95330..95647 | + | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE40_RS21520 (LOE40_21480) | 95604..96989 | + | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE40_RS21525 (LOE40_21485) | 97170..97550 | + | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE40_RS21530 (LOE40_21490) | 97586..98056 | + | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE40_RS21535 (LOE40_21495) | 98068..100275 | + | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE40_RS21540 (LOE40_21500) | 100256..101236 | + | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE40_RS21545 (LOE40_21505) | 101242..103149 | + | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE40_RS21550 (LOE40_21510) | 103146..103847 | + | 702 | WP_028288616.1 | VIT family protein | - |
| LOE40_RS21555 (LOE40_21515) | 103983..104144 | + | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE40_RS21560 (LOE40_21520) | 104173..104466 | - | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE40_RS21565 (LOE40_21525) | 104818..105288 | + | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE40_RS21570 (LOE40_21530) | 105329..106267 | + | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE40_RS21575 (LOE40_21535) | 106291..106563 | + | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE40_RS21580 (LOE40_21540) | 106651..107040 | + | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE40_RS21585 (LOE40_21545) | 107255..108286 | + | 1032 | WP_224558028.1 | IS110 family transposase ISRhru3 | Transposase |
| LOE40_RS21590 (LOE40_21550) | 108754..110559 | + | 1806 | WP_230040113.1 | ParB/RepB/Spo0J family partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|