MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82231 bp
Accession: NZ_CP086772 Location: 1..82231 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-74 Replicon: plasmid P8
Accession: NZ_CP086772 Location: 1..82231 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-74 Replicon: plasmid P8
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE41_RS23825 (LOE41_23815) | 548..3438 | + | 2891 | Protein_1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE41_RS23830 (LOE41_23820) | 3547..4656 | + | 1110 | WP_229939302.1 | ABC transporter substrate-binding protein | - |
| LOE41_RS23835 (LOE41_23825) | 4653..5582 | + | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE41_RS23840 (LOE41_23830) | 5626..6390 | + | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE41_RS23845 (LOE41_23835) | 6387..7835 | + | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE41_RS23850 (LOE41_23840) | 7866..8183 | - | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE41_RS23855 (LOE41_23845) | 8193..8909 | - | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE41_RS23860 (LOE41_23850) | 8925..9620 | - | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE41_RS23865 (LOE41_23855) | 9613..10398 | - | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE41_RS23870 (LOE41_23860) | 10395..11147 | - | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE41_RS23875 (LOE41_23865) | 11414..12376 | + | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE41_RS23880 (LOE41_23870) | 12462..14336 | + | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE41_RS23885 (LOE41_23875) | 14358..16043 | + | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE41_RS23890 (LOE41_23880) | 16069..17511 | + | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE41_RS23895 (LOE41_23885) | 17535..18164 | + | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE41_RS23900 (LOE41_23890) | 18580..20253 | - | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE41_RS23905 (LOE41_23895) | 20262..20969 | - | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE41_RS23910 (LOE41_23900) | 21108..23834 | - | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE41_RS23915 (LOE41_23905) | 23804..24850 | - | 1047 | WP_081855458.1 | serine protease | - |
| LOE41_RS23920 (LOE41_23910) | 24856..26826 | - | 1971 | WP_224557597.1 | caspase family protein | - |
| LOE41_RS23925 (LOE41_23915) | 26990..27553 | - | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE41_RS23930 (LOE41_23920) | 27841..28428 | + | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE41_RS23935 (LOE41_23925) | 28586..30040 | - | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE41_RS23940 (LOE41_23930) | 30082..31407 | - | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE41_RS23945 (LOE41_23935) | 31404..32099 | - | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE41_RS23950 (LOE41_23940) | 32092..33375 | - | 1284 | WP_229940774.1 | trypsin-like peptidase domain-containing protein | - |
| LOE41_RS23955 (LOE41_23945) | 33533..34153 | + | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE41_RS23960 (LOE41_23950) | 34165..36237 | + | 2073 | WP_224557590.1 | caspase family protein | - |
| LOE41_RS23965 (LOE41_23955) | 36336..37316 | - | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE41_RS23970 (LOE41_23960) | 37313..38515 | - | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE41_RS23975 (LOE41_23965) | 39141..40151 | + | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE41_RS23980 (LOE41_23970) | 40288..41724 | - | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE41_RS23985 (LOE41_23975) | 41721..43310 | - | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE41_RS23990 (LOE41_23980) | 43885..44640 | - | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE41_RS23995 (LOE41_23985) | 44753..45460 | + | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE41_RS24000 (LOE41_23990) | 45457..46143 | + | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE41_RS24005 (LOE41_23995) | 46352..48187 | - | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE41_RS24010 (LOE41_24000) | 48356..49879 | - | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE41_RS24015 (LOE41_24005) | 50009..50965 | - | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE41_RS24020 (LOE41_24010) | 51374..52240 | - | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE41_RS24025 (LOE41_24015) | 52252..52554 | - | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE41_RS24030 (LOE41_24020) | 52644..53576 | - | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE41_RS24035 (LOE41_24025) | 53745..54809 | + | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE41_RS24040 (LOE41_24030) | 54891..56411 | + | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE41_RS24045 (LOE41_24035) | 56424..57620 | + | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE41_RS24050 (LOE41_24040) | 57633..59375 | + | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE41_RS24055 (LOE41_24045) | 59375..60301 | + | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE41_RS24060 (LOE41_24050) | 60338..61255 | + | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE41_RS24065 (LOE41_24055) | 61344..61904 | + | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE41_RS24070 (LOE41_24060) | 61901..62956 | + | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE41_RS24075 (LOE41_24065) | 62953..63831 | + | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE41_RS24080 (LOE41_24070) | 64122..64817 | + | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE41_RS24085 (LOE41_24075) | 65016..66194 | - | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE41_RS24090 (LOE41_24080) | 66194..67510 | - | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE41_RS24095 (LOE41_24085) | 67527..69074 | - | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE41_RS24100 (LOE41_24090) | 69199..69936 | + | 738 | WP_229940771.1 | GntR family transcriptional regulator | - |
| LOE41_RS24105 (LOE41_24095) | 70405..70680 | - | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE41_RS24110 (LOE41_24100) | 70673..70966 | - | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE41_RS24115 (LOE41_24105) | 71037..71942 | - | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE41_RS24120 (LOE41_24110) | 71953..73692 | - | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE41_RS24125 (LOE41_24115) | 73954..75489 | + | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE41_RS24130 (LOE41_24120) | 75495..76469 | + | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE41_RS24135 (LOE41_24125) | 76533..77747 | - | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE41_RS24140 (LOE41_24130) | 77849..78487 | - | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE41_RS24145 (LOE41_24135) | 78547..78975 | + | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE41_RS24150 (LOE41_24140) | 79206..80135 | - | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE41_RS24155 (LOE41_24145) | 80122..80427 | - | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE41_RS24160 (LOE41_24150) | 80556..80789 | + | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE41_RS24165 (LOE41_24155) | 81128..81946 | + | 819 | Protein_69 | GTP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|