MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95795 bp
Accession: NZ_CP086769 Location: 1..95795 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-74 Replicon: plasmid P5
Accession: NZ_CP086769 Location: 1..95795 Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-74 Replicon: plasmid P5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE41_RS21470 (LOE41_21460) | 58..1152 | + | 1095 | WP_224556253.1 | tyrosine-type recombinase/integrase | - |
| LOE41_RS21475 (LOE41_21465) | 1256..4594 | - | 3339 | WP_224556255.1 | DEAD/DEAH box helicase | - |
| LOE41_RS21480 (LOE41_21470) | 4799..5686 | + | 888 | WP_114273238.1 | Tn3 family transposase ISPsy42 | Transposase |
| LOE41_RS21485 (LOE41_21475) | 6128..7330 | + | 1203 | WP_089852475.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE41_RS21490 (LOE41_21480) | 7320..8279 | + | 960 | WP_121066477.1 | plasmid partitioning protein RepB | - |
| LOE41_RS21495 (LOE41_21485) | 8519..9676 | + | 1158 | WP_121066480.1 | helix-turn-helix domain-containing protein | - |
| LOE41_RS21500 (LOE41_21490) | 9742..10785 | + | 1044 | WP_114276417.1 | IS5 family transposase ISPmar3 | Transposase |
| LOE41_RS21505 (LOE41_21495) | 11076..13253 | + | 2178 | WP_224556256.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE41_RS21510 (LOE41_21500) | 13353..13826 | + | 474 | WP_114276003.1 | hypothetical protein | - |
| LOE41_RS21515 (LOE41_21505) | 14210..14374 | + | 165 | WP_007803240.1 | hypothetical protein | - |
| LOE41_RS21520 (LOE41_21510) | 14613..16058 | + | 1446 | WP_114276004.1 | hypothetical protein | - |
| LOE41_RS21525 (LOE41_21515) | 16068..16355 | - | 288 | WP_009827212.1 | H-NS histone family protein | - |
| LOE41_RS21530 (LOE41_21520) | 16775..17179 | + | 405 | WP_009827211.1 | single-stranded DNA-binding protein | - |
| LOE41_RS21535 (LOE41_21525) | 17234..17830 | - | 597 | WP_037954955.1 | hypothetical protein | - |
| LOE41_RS21540 (LOE41_21530) | 17870..18775 | + | 906 | WP_114276002.1 | hypothetical protein | - |
| LOE41_RS21545 (LOE41_21535) | 18913..20112 | + | 1200 | WP_121066443.1 | DUF932 domain-containing protein | - |
| LOE41_RS21550 (LOE41_21540) | 20240..20680 | + | 441 | WP_114276349.1 | DNA repair protein RadC | - |
| LOE41_RS21555 (LOE41_21545) | 20790..21308 | + | 519 | WP_114276373.1 | DNA repair protein RadC | - |
| LOE41_RS21560 (LOE41_21550) | 21412..21903 | + | 492 | WP_067297141.1 | hypothetical protein | - |
| LOE41_RS21565 (LOE41_21555) | 21914..22291 | + | 378 | WP_114276348.1 | hypothetical protein | - |
| LOE41_RS21570 (LOE41_21560) | 22293..22490 | + | 198 | WP_047998245.1 | hypothetical protein | - |
| LOE41_RS21575 (LOE41_21565) | 22566..22985 | + | 420 | WP_067297244.1 | hypothetical protein | - |
| LOE41_RS21580 (LOE41_21570) | 22978..23622 | + | 645 | WP_121066445.1 | antitoxin of toxin-antitoxin stability system | - |
| LOE41_RS21585 (LOE41_21575) | 23681..24082 | + | 402 | WP_067297291.1 | MbcA/ParS/Xre antitoxin family protein | - |
| LOE41_RS21590 (LOE41_21580) | 24079..24780 | + | 702 | WP_067297288.1 | RES family NAD+ phosphorylase | - |
| LOE41_RS21595 (LOE41_21585) | 25303..25596 | - | 294 | WP_067297285.1 | hypothetical protein | - |
| LOE41_RS21600 (LOE41_21590) | 25773..26153 | + | 381 | Protein_26 | hypothetical protein | - |
| LOE41_RS21605 (LOE41_21595) | 26255..27363 | + | 1109 | Protein_27 | IS110 family transposase ISSfr2 | Transposase |
| LOE41_RS21610 (LOE41_21600) | 27589..30258 | + | 2670 | WP_229939218.1 | strawberry notch family protein | - |
| LOE41_RS21615 (LOE41_21605) | 30235..30681 | - | 447 | Protein_29 | IS6 family transposase | - |
| LOE41_RS21620 (LOE41_21610) | 30751..31341 | + | 591 | WP_052418560.1 | LysR substrate-binding domain-containing protein | - |
| LOE41_RS21625 (LOE41_21615) | 31372..32292 | + | 921 | WP_043755133.1 | HTH-type transcriptional regulator GltC | VF |
| LOE41_RS21630 (LOE41_21620) | 32441..33439 | + | 999 | WP_052418559.1 | TRAP transporter substrate-binding protein DctP | - |
| LOE41_RS21635 (LOE41_21625) | 33505..34050 | + | 546 | WP_081979733.1 | TRAP transporter small permease | - |
| LOE41_RS21640 (LOE41_21630) | 34050..35330 | + | 1281 | WP_052418558.1 | TRAP transporter large permease | - |
| LOE41_RS21645 (LOE41_21635) | 35320..36663 | + | 1344 | WP_224557915.1 | MmgE/PrpD family protein | - |
| LOE41_RS21650 (LOE41_21640) | 36660..37154 | + | 495 | WP_043755128.1 | MaoC family dehydratase | - |
| LOE41_RS21655 (LOE41_21645) | 37151..38386 | + | 1236 | WP_043755124.1 | acyl-CoA dehydrogenase family protein | - |
| LOE41_RS21660 (LOE41_21650) | 38397..38882 | + | 486 | WP_043755138.1 | MaoC family dehydratase | - |
| LOE41_RS21665 (LOE41_21655) | 38879..40108 | + | 1230 | WP_043755120.1 | CoA transferase | - |
| LOE41_RS21670 (LOE41_21660) | 40118..41035 | + | 918 | WP_043755117.1 | CoA ester lyase | - |
| LOE41_RS21680 (LOE41_21670) | 41925..42555 | - | 631 | Protein_42 | IS3 family transposase ISPko4 | Transposase |
| LOE41_RS21685 (LOE41_21675) | 42616..43035 | + | 420 | WP_229940658.1 | hypothetical protein | - |
| LOE41_RS21690 (LOE41_21680) | 43236..43955 | - | 720 | WP_224557875.1 | hypothetical protein | - |
| LOE41_RS21695 (LOE41_21685) | 44112..44972 | + | 861 | WP_224557876.1 | LysR family transcriptional regulator | - |
| LOE41_RS21700 (LOE41_21690) | 45327..46346 | - | 1020 | WP_224557877.1 | IS110 family transposase ISAzs4 | Transposase |
| LOE41_RS21705 (LOE41_21695) | 46472..46897 | + | 426 | WP_224557878.1 | hypothetical protein | - |
| LOE41_RS21710 (LOE41_21700) | 46972..47937 | - | 966 | WP_224557879.1 | Transcriptional regulatory protein AfsQ1 | VF |
| LOE41_RS21715 (LOE41_21705) | 47934..49271 | - | 1338 | WP_224557880.1 | HAMP domain-containing sensor histidine kinase | - |
| LOE41_RS21720 (LOE41_21710) | 49268..49750 | - | 483 | WP_224557881.1 | molybdopterin-dependent oxidoreductase | - |
| LOE41_RS21725 (LOE41_21715) | 49887..50438 | + | 552 | WP_224557882.1 | hypothetical protein | - |
| LOE41_RS21730 (LOE41_21720) | 50440..51012 | + | 573 | WP_224557883.1 | hypothetical protein | - |
| LOE41_RS21735 (LOE41_21725) | 51021..51500 | + | 480 | WP_224557884.1 | hypothetical protein | - |
| LOE41_RS21740 (LOE41_21730) | 51497..52024 | + | 528 | WP_224557885.1 | hypothetical protein | - |
| LOE41_RS21745 (LOE41_21735) | 52021..52545 | + | 525 | WP_224557886.1 | hypothetical protein | - |
| LOE41_RS21750 (LOE41_21740) | 52569..53540 | + | 972 | WP_224557888.1 | hypothetical protein | - |
| LOE41_RS21755 (LOE41_21745) | 53537..55837 | + | 2301 | WP_224557889.1 | VWA domain-containing protein | - |
| LOE41_RS21760 (LOE41_21750) | 55876..56370 | + | 495 | WP_224557890.1 | hypothetical protein | - |
| LOE41_RS21765 (LOE41_21760) | 56582..57506 | - | 925 | Protein_59 | IS5 family transposase ISUnCu15 | Transposase |
| LOE41_RS21770 (LOE41_21765) | 57826..58854 | - | 1029 | WP_224557892.1 | IS110 family transposase ISPko7 | Transposase |
| LOE41_RS21775 (LOE41_21770) | 59138..61366 | - | 2229 | WP_224557893.1 | glycosyltransferase | - |
| LOE41_RS21780 (LOE41_21775) | 61363..62427 | - | 1065 | WP_224557894.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
| LOE41_RS21785 (LOE41_21780) | 62898..64261 | + | 1364 | WP_229939207.1 | IS3 family transposase ISPko4 | Transposase |
| LOE41_RS21790 (LOE41_21785) | 64364..65164 | + | 801 | WP_284145095.1 | zinc-binding dehydrogenase | - |
| LOE41_RS21795 (LOE41_21790) | 65183..65713 | - | 531 | WP_224557955.1 | Lrp/AsnC ligand binding domain-containing protein | - |
| LOE41_RS21800 (LOE41_21795) | 65777..69244 | + | 3468 | WP_224557954.1 | indolepyruvate ferredoxin oxidoreductase family protein | - |
| LOE41_RS21805 (LOE41_21800) | 69343..70353 | + | 1011 | WP_224557953.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| LOE41_RS21810 (LOE41_21805) | 70736..71895 | + | 1160 | WP_224557952.1 | IS3 family transposase ISOba2 | Transposase |
| LOE41_RS21815 (LOE41_21810) | 71919..72116 | - | 198 | WP_224557951.1 | hypothetical protein | - |
| LOE41_RS21820 (LOE41_21815) | 72171..73556 | - | 1386 | WP_224558008.1 | ISKra4 family transposase ISUnCu7 | Transposase |
| LOE41_RS21825 (LOE41_21820) | 73583..74164 | - | 582 | WP_224558009.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| LOE41_RS21830 (LOE41_21825) | 74283..74945 | - | 663 | WP_224558010.1 | plasmid pRiA4b ORF-3 family protein | - |
| LOE41_RS21835 (LOE41_21830) | 75006..75332 | - | 327 | Protein_73 | DEAD/DEAH box helicase family protein | - |
| LOE41_RS21840 (LOE41_21835) | 75508..76980 | - | 1473 | WP_224557920.1 | ATP-binding protein | - |
| LOE41_RS21845 (LOE41_21840) | 77142..78200 | - | 1059 | WP_224557922.1 | HEPN domain-containing protein | - |
| LOE41_RS21850 (LOE41_21845) | 78197..80947 | - | 2751 | WP_224557923.1 | lactate dehydrogenase | - |
| LOE41_RS21855 (LOE41_21850) | 80944..81366 | - | 423 | WP_224557924.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LOE41_RS21860 (LOE41_21855) | 81370..81618 | - | 249 | WP_229939240.1 | plasmid stabilization protein | Antitoxin Detail |
| LOE41_RS21865 (LOE41_21860) | 81766..82755 | - | 990 | WP_224557926.1 | Type IV secretion system protein VirB11 | VF |
| LOE41_RS21870 (LOE41_21865) | 82866..84323 | - | 1458 | WP_224557927.1 | Type IV secretion system protein PtlG | VF |
| LOE41_RS21875 (LOE41_21870) | 84326..85057 | - | 732 | WP_224557928.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| LOE41_RS21880 (LOE41_21875) | 85061..85705 | - | 645 | WP_224557929.1 | Type IV secretion system protein PtlE | VF |
| LOE41_RS21885 (LOE41_21880) | 85708..86709 | - | 1002 | WP_224557930.1 | type IV secretion system protein | - |
| LOE41_RS21890 (LOE41_21885) | 86709..87197 | - | 489 | WP_229939238.1 | hypothetical protein | - |
| LOE41_RS21895 (LOE41_21890) | 87201..88010 | - | 810 | WP_224557967.1 | type IV secretion system protein | - |
| LOE41_RS21900 (LOE41_21895) | 88000..89088 | - | 1089 | WP_224557968.1 | lytic transglycosylase domain-containing protein | - |
| LOE41_RS21905 (LOE41_21900) | 89254..91473 | - | 2220 | WP_224557969.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LOE41_RS21910 (LOE41_21905) | 91613..91888 | - | 276 | WP_009819926.1 | VirB3 family type IV secretion system protein | - |
| LOE41_RS21915 (LOE41_21910) | 91912..92196 | - | 285 | WP_224557971.1 | hypothetical protein | VF |
| LOE41_RS21920 (LOE41_21915) | 92193..92774 | - | 582 | WP_224557975.1 | lytic transglycosylase domain-containing protein | - |
| LOE41_RS21925 (LOE41_21920) | 93363..93632 | + | 270 | WP_111550073.1 | hypothetical protein | - |
| LOE41_RS21930 (LOE41_21925) | 93718..94371 | + | 654 | WP_121066465.1 | hypothetical protein | - |
| LOE41_RS21935 (LOE41_21930) | 94592..95749 | + | 1158 | WP_121066468.1 | replication initiation protein RepC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|