MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 168031 bp
Accession: NZ_CP086765        Location: 1..168031         Organism: Pseudosulfitobacter pseudonitzschiae strain TT37-74       Replicon: plasmid P1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LOE41_RS19225 (LOE41_19225) 82..1296 - 1215 WP_224558000.1 IS256 family transposase ISPa1328 Transposase
LOE41_RS19230 (LOE41_19230) 1241..1945 - 705 WP_229941115.1 AAA family ATPase -
LOE41_RS19235 (LOE41_19235) 2051..3009 + 959 Protein_2 IS481 family transposase -
LOE41_RS19240 3274..3543 - 270 WP_229940776.1 hypothetical protein -
LOE41_RS19245 (LOE41_19240) 3698..3856 + 159 WP_224557998.1 IS110 family transposase ISMdi12 Transposase
LOE41_RS19250 (LOE41_19245) 3939..5185 + 1247 Protein_5 IS3 family transposase ISGxy1 Transposase
LOE41_RS19255 (LOE41_19250) 5125..6651 - 1527 WP_224558022.1 IS66 family transposase ISAzs18 Transposase
LOE41_RS19260 (LOE41_19255) 6730..7076 - 347 Protein_7 IS66 family transposase ISCro1 Transposase
LOE41_RS19265 (LOE41_19260) 7073..7351 - 279 WP_229939064.1 IS66 family transposase ISSme3 Transposase
LOE41_RS19270 (LOE41_19265) 7637..8230 - 594 WP_224556993.1 SMC-Scp complex subunit ScpB -
LOE41_RS19275 (LOE41_19270) 8233..9117 - 885 WP_224556992.1 DUF1403 family protein -
LOE41_RS19280 9381..9647 - 267 WP_229939116.1 hypothetical protein -
LOE41_RS19285 (LOE41_19280) 9644..9748 - 105 WP_229939115.1 hypothetical protein -
LOE41_RS19290 (LOE41_19285) 10169..10558 + 390 WP_224556990.1 helix-turn-helix domain-containing protein -
LOE41_RS19295 (LOE41_19290) 12333..12506 + 174 WP_229939113.1 DDE-type integrase/transposase/recombinase -
LOE41_RS19300 (LOE41_19295) 12792..13504 - 713 Protein_15 IS6 family transposase -
LOE41_RS19305 (LOE41_19300) 13398..13901 - 504 WP_224556988.1 type II toxin-antitoxin system VapC family toxin -
LOE41_RS19310 (LOE41_19305) 13928..14143 - 216 WP_224556986.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
LOE41_RS19315 (LOE41_19310) 14244..14858 - 615 WP_224556984.1 SMC-Scp complex subunit ScpB -
LOE41_RS19320 (LOE41_19315) 14861..15745 - 885 WP_224556983.1 DUF1403 family protein -
LOE41_RS19325 (LOE41_19320) 16462..17052 - 591 Protein_20 NAD(P)H-dependent oxidoreductase -
LOE41_RS19330 (LOE41_19325) 17530..19989 - 2460 WP_224556981.1 hypothetical protein -
LOE41_RS19335 (LOE41_19330) 19993..20829 - 837 WP_224556979.1 5-dehydro-4-deoxy-D-glucuronate isomerase -
LOE41_RS19340 (LOE41_19335) 21072..22088 + 1017 WP_224556977.1 LacI family DNA-binding transcriptional regulator -
LOE41_RS19345 (LOE41_19340) 22093..22833 - 741 WP_224556975.1 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase VF
LOE41_RS19350 (LOE41_19345) 22847..24154 - 1308 WP_229939144.1 TRAP transporter large permease -
LOE41_RS19355 (LOE41_19350) 24177..24677 - 501 WP_224556969.1 TRAP transporter small permease -
LOE41_RS19360 (LOE41_19355) 24985..26052 + 1068 WP_224556967.1 TRAP transporter substrate-binding protein -
LOE41_RS19365 (LOE41_19360) 26084..27181 + 1098 WP_229939103.1 glycoside hydrolase family 88 protein -
LOE41_RS19370 (LOE41_19365) 27269..27427 + 159 Protein_29 short-chain dehydrogenase -
LOE41_RS19375 (LOE41_19370) 27910..29109 + 1200 WP_037930394.1 Cell division protein PomZ VF
LOE41_RS19380 (LOE41_19375) 29109..30080 + 972 WP_224556962.1 plasmid partitioning protein RepB -
LOE41_RS19385 (LOE41_19380) 30319..31374 + 1056 WP_224556960.1 plasmid replication protein RepC -
LOE41_RS19390 (LOE41_19385) 33204..34085 + 882 WP_224556958.1 zinc-binding dehydrogenase -
LOE41_RS19395 (LOE41_19390) 34303..35006 - 704 Protein_34 IS6 family transposase ISRH1 Transposase
LOE41_RS19400 (LOE41_19395) 35097..35915 + 819 WP_229940646.1 hypothetical protein -
LOE41_RS19405 (LOE41_19400) 35976..36242 - 267 WP_224556955.1 Txe/YoeB family addiction module toxin Toxin Detail
LOE41_RS19410 (LOE41_19405) 36239..36490 - 252 WP_224556953.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin Detail
LOE41_RS19415 (LOE41_19410) 37122..38033 - 912 Protein_38 IS3 family transposase ISXau3 Transposase
LOE41_RS19420 (LOE41_19415) 38034..38978 - 945 Protein_39 IS110 family transposase ISWpi13 Transposase
LOE41_RS19425 (LOE41_19420) 39144..39635 + 492 WP_224557005.1 3-keto-5-aminohexanoate cleavage protein -
LOE41_RS19430 (LOE41_19425) 39877..40233 + 357 WP_224556951.1 hypothetical protein -
LOE41_RS19435 (LOE41_19430) 40296..41963 + 1668 WP_224556950.1 sulfatase-like hydrolase/transferase -
LOE41_RS19440 (LOE41_19435) 42015..42151 + 137 Protein_43 IS481 family transposase -
LOE41_RS19445 (LOE41_19440) 42139..43272 - 1134 WP_224557003.1 FAD-dependent monooxygenase -
LOE41_RS19450 (LOE41_19445) 43466..46879 - 3414 WP_224556949.1 molybdopterin-dependent oxidoreductase -
LOE41_RS19455 (LOE41_19450) 46876..47388 - 513 WP_224556948.1 (2Fe-2S)-binding protein -
LOE41_RS19460 (LOE41_19455) 47684..48148 + 465 WP_224556946.1 MarR family transcriptional regulator -
LOE41_RS19465 (LOE41_19460) 48156..48824 + 669 WP_224556944.1 HTH-type transcriptional repressor VF
LOE41_RS19470 (LOE41_19465) 48985..49686 + 702 WP_224557001.1 maleate isomerase -
LOE41_RS19475 (LOE41_19470) 49698..50480 + 783 WP_224556941.1 alpha/beta hydrolase -
LOE41_RS19480 (LOE41_19475) 50508..51539 + 1032 WP_224556938.1 leucyl aminopeptidase -
LOE41_RS19485 (LOE41_19480) 51561..52184 + 624 WP_224556935.1 isochorismatase family protein -
LOE41_RS19490 (LOE41_19485) 52301..52486 + 186 WP_224556932.1 hypothetical protein -
LOE41_RS19495 (LOE41_19490) 52483..53964 + 1482 WP_224556929.1 sodium:solute symporter family protein -
LOE41_RS19500 (LOE41_19495) 54345..54563 - 219 WP_224556926.1 4-oxalocrotonate tautomerase family protein -
LOE41_RS19505 (LOE41_19500) 54567..54947 - 381 WP_224556923.1 nuclear transport factor 2 family protein -
LOE41_RS19510 (LOE41_19505) 54944..55555 - 612 WP_224556921.1 glutathione transferase GstA -
LOE41_RS19515 (LOE41_19510) 55656..56543 + 888 WP_224556916.1 LysR family transcriptional regulator -
LOE41_RS19520 (LOE41_19515) 56845..57366 - 522 WP_224556913.1 carbon monoxide dehydrogenase subunit G -
LOE41_RS19525 (LOE41_19520) 57380..57775 - 396 WP_224556911.1 cytochrome c family protein -
LOE41_RS19530 (LOE41_19525) 57946..58053 + 108 WP_224556908.1 pyrroloquinoline quinone precursor peptide PqqA -
LOE41_RS19535 (LOE41_19530) 58067..58954 + 888 WP_224556905.1 pyrroloquinoline quinone biosynthesis protein PqqB -
LOE41_RS19540 (LOE41_19535) 58951..59694 + 744 WP_224556903.1 pyrroloquinoline-quinone synthase PqqC -
LOE41_RS19545 (LOE41_19540) 59694..59972 + 279 WP_224556902.1 pyrroloquinoline quinone biosynthesis peptide chaperone PqqD -
LOE41_RS19550 (LOE41_19545) 59956..61041 + 1086 WP_224556900.1 pyrroloquinoline quinone biosynthesis protein PqqE -
LOE41_RS19555 (LOE41_19550) 61057..61743 + 687 WP_224556898.1 vWA domain-containing protein -
LOE41_RS19560 (LOE41_19555) 61740..62516 - 777 WP_224556896.1 ABC transporter permease -
LOE41_RS19565 (LOE41_19560) 62640..64721 + 2082 WP_224556895.1 4Fe-4S binding protein -
LOE41_RS19570 (LOE41_19565) 64718..65590 + 873 WP_224556893.1 FAD:protein FMN transferase -
LOE41_RS19575 (LOE41_19570) 65655..66437 - 783 WP_224556891.1 xanthine dehydrogenase family protein subunit M -
LOE41_RS19580 (LOE41_19575) 66448..68820 - 2373 WP_224556889.1 xanthine dehydrogenase family protein molybdopterin-binding subunit -
LOE41_RS19585 (LOE41_19580) 68842..69327 - 486 WP_224556887.1 (2Fe-2S)-binding protein -
LOE41_RS19590 (LOE41_19585) 69477..70349 - 873 WP_224556997.1 transporter substrate-binding domain-containing protein -
LOE41_RS19595 (LOE41_19590) 70384..71082 - 699 WP_224556885.1 cytochrome c-550 PedF -
LOE41_RS19600 (LOE41_19595) 71272..72402 + 1131 WP_224556882.1 ABC transporter substrate-binding protein -
LOE41_RS19605 (LOE41_19600) 72399..73358 + 960 WP_224556880.1 YVTN family beta-propeller repeat protein -
LOE41_RS19610 (LOE41_19605) 73376..73825 + 450 WP_224556878.1 hypothetical protein -
LOE41_RS19615 (LOE41_19610) 73822..74538 + 717 WP_224556875.1 putative ABC transporter ATP-binding protein YadG VF
LOE41_RS19620 (LOE41_19615) 74535..75326 + 792 WP_224556871.1 ABC transporter permease -
LOE41_RS19625 (LOE41_19620) 75361..75897 + 537 WP_224556869.1 hypothetical protein VF
LOE41_RS19630 (LOE41_19625) 75837..76511 - 675 WP_224556995.1 Taurine import ATP-binding protein TauB VF
LOE41_RS19635 (LOE41_19630) 76517..77494 - 978 WP_224556865.1 ABC transporter substrate-binding protein -
LOE41_RS19640 (LOE41_19635) 77682..79457 + 1776 WP_224556863.1 PQQ-dependent methanol/ethanol family dehydrogenase -
LOE41_RS19645 (LOE41_19640) 79568..80269 + 702 WP_224556861.1 response regulator transcription factor -
LOE41_RS19650 (LOE41_19645) 80456..81502 + 1047 WP_229939099.1 FIST N-terminal domain-containing protein -
LOE41_RS19655 (LOE41_19650) 81499..83721 + 2223 WP_224556857.1 PAS-domain containing protein -
LOE41_RS19660 (LOE41_19655) 83871..84422 - 552 WP_224556854.1 Protein YrdA VF
LOE41_RS19665 (LOE41_19660) 84510..85268 - 759 WP_224556852.1 enoyl-CoA hydratase -
LOE41_RS19670 (LOE41_19665) 85454..85927 - 474 WP_224556849.1 MarR family winged helix-turn-helix transcriptional regulator -
LOE41_RS19675 (LOE41_19670) 86400..86651 + 252 WP_224556848.1 helix-turn-helix domain-containing protein -
LOE41_RS19680 (LOE41_19675) 86651..87985 + 1335 WP_224556846.1 type II toxin-antitoxin system HipA family toxin -
LOE41_RS19685 (LOE41_19680) 88403..88693 - 291 WP_224556843.1 hypothetical protein -
LOE41_RS19690 (LOE41_19685) 89110..89682 - 573 WP_229939138.1 TetR/AcrR family transcriptional regulator -
LOE41_RS19695 (LOE41_19690) 89821..90318 + 498 WP_224556840.1 (2Fe-2S)-binding protein -
LOE41_RS19700 (LOE41_19695) 90315..91370 + 1056 WP_224556839.1 xanthine dehydrogenase family protein subunit M -
LOE41_RS19705 (LOE41_19700) 91363..93609 + 2247 WP_224556838.1 xanthine dehydrogenase family protein molybdopterin-binding subunit -
LOE41_RS19710 (LOE41_19705) 94250..96250 - 2001 WP_224556837.1 TonB-dependent siderophore receptor -
LOE41_RS19715 (LOE41_19710) 96418..97248 - 831 WP_224556836.1 putative siderophore transport system ATP-binding protein YusV VF
LOE41_RS19720 (LOE41_19715) 97245..98219 - 975 WP_229939136.1 Iron-uptake system permease protein FeuC VF
LOE41_RS19725 (LOE41_19720) 98288..99289 - 1002 WP_229939097.1 putative siderophore transport system permease protein YfiZ VF
LOE41_RS19730 (LOE41_19725) 99286..100257 - 972 WP_224556833.1 ABC transporter substrate-binding protein -
LOE41_RS19735 (LOE41_19730) 100298..101356 - 1059 WP_224556832.1 siderophore-interacting protein -
LOE41_RS19740 (LOE41_19735) 101507..102430 - 924 WP_229940879.1 LysR family transcriptional regulator -
LOE41_RS19745 (LOE41_19740) 102637..103086 + 450 WP_224556829.1 tripartite tricarboxylate transporter TctB family protein -
LOE41_RS19750 (LOE41_19745) 103094..104629 + 1536 WP_224556827.1 tripartite tricarboxylate transporter permease -
LOE41_RS19755 (LOE41_19750) 104648..105610 + 963 WP_224556825.1 tripartite tricarboxylate transporter substrate binding protein -
LOE41_RS19760 (LOE41_19755) 105698..106900 + 1203 WP_224556823.1 CoA transferase -
LOE41_RS19765 (LOE41_19760) 106953..109184 - 2232 WP_051694640.1 TRAP transporter permease -
LOE41_RS19770 (LOE41_19765) 109181..109687 - 507 WP_051694641.1 DUF1850 domain-containing protein -
LOE41_RS19775 (LOE41_19770) 109687..110664 - 978 WP_037930311.1 TAXI family TRAP transporter solute-binding subunit -
LOE41_RS19780 (LOE41_19775) 110807..111622 + 816 WP_229940640.1 N-formylglutamate deformylase -
LOE41_RS19785 (LOE41_19780) 111619..113046 + 1428 WP_224556820.1 formimidoylglutamate deiminase -
LOE41_RS19790 (LOE41_19785) 113058..113807 + 750 WP_224556817.1 IclR family transcriptional regulator -
LOE41_RS19795 (LOE41_19790) 113847..114830 - 984 WP_037930317.1 HTH-type transcriptional regulator CdhR VF
LOE41_RS19800 (LOE41_19795) 114942..116192 + 1251 WP_224556816.1 sarcosine oxidase subunit beta family protein -
LOE41_RS19805 (LOE41_19800) 116203..116499 + 297 WP_028957964.1 sarcosine oxidase subunit delta -
LOE41_RS19810 (LOE41_19805) 116496..119441 + 2946 WP_224556814.1 sarcosine oxidase subunit alpha family protein -
LOE41_RS19815 (LOE41_19810) 119434..119988 + 555 WP_224556812.1 sarcosine oxidase subunit gamma -
LOE41_RS19820 (LOE41_19815) 120091..120972 + 882 WP_224556810.1 formyltetrahydrofolate deformylase -
LOE41_RS19825 (LOE41_19820) 121568..122491 + 924 WP_224556808.1 zincin-like metallopeptidase domain-containing protein -
LOE41_RS19830 (LOE41_19825) 122596..122985 + 390 WP_224556806.1 DUF3768 domain-containing protein -
LOE41_RS19835 (LOE41_19830) 123189..124220 + 1032 WP_224558028.1 IS110 family transposase ISRhru3 Transposase
LOE41_RS19840 (LOE41_19835) 124684..126666 + 1983 WP_090525078.1 ParB/RepB/Spo0J family partition protein -
LOE41_RS19845 (LOE41_19840) 126740..127300 + 561 WP_224557983.1 regulator -
LOE41_RS19850 (LOE41_19845) 127300..127953 + 654 WP_224557984.1 hypothetical protein -
LOE41_RS19855 (LOE41_19850) 128077..128403 + 327 WP_224557985.1 type II toxin-antitoxin system PrlF family antitoxin -
LOE41_RS19860 (LOE41_19855) 128400..128918 + 519 Protein_127 type II toxin-antitoxin system YhaV family toxin -
LOE41_RS19865 (LOE41_19860) 129841..130065 + 225 WP_108693368.1 transcriptional regulator/antitoxin MazE -
LOE41_RS19870 (LOE41_19865) 130062..130457 + 396 WP_224557987.1 type II toxin-antitoxin system death-on-curing family toxin -
LOE41_RS19875 (LOE41_19870) 130594..130917 + 324 Protein_130 methylase -
LOE41_RS19880 (LOE41_19875) 131019..132128 + 1110 WP_224558030.1 IS110 family transposase ISEc45 Transposase
LOE41_RS19885 (LOE41_19880) 132420..133322 + 903 Protein_132 methyltransferase -
LOE41_RS19890 (LOE41_19885) 133581..133949 - 369 WP_008327368.1 hypothetical protein -
LOE41_RS19895 (LOE41_19890) 134161..134412 + 252 WP_224557941.1 hypothetical protein -
LOE41_RS19900 (LOE41_19895) 134486..135490 - 1005 WP_224557933.1 alpha/beta hydrolase family protein -
LOE41_RS19905 (LOE41_19900) 135503..137194 - 1692 WP_224557934.1 hypothetical protein -
LOE41_RS19910 (LOE41_19905) 137334..137615 + 282 WP_224557935.1 hypothetical protein -
LOE41_RS19915 (LOE41_19910) 137713..138447 + 735 WP_224557936.1 hypothetical protein -
LOE41_RS19920 (LOE41_19915) 138730..139758 + 1029 WP_224557937.1 IS30 family transposase ISRssp4 Transposase
LOE41_RS19925 (LOE41_19920) 139780..140256 - 477 WP_224557938.1 MarR family transcriptional regulator -
LOE41_RS19930 (LOE41_19925) 140708..141514 - 807 WP_051539349.1 Beta-barrel assembly-enhancing protease VF
LOE41_RS19935 (LOE41_19930) 141561..143336 - 1776 WP_224557939.1 pilus assembly protein TadG-related protein -
LOE41_RS19940 (LOE41_19935) 143326..143748 - 423 WP_224557940.1 pilus assembly protein -
LOE41_RS19945 (LOE41_19940) 143745..144695 - 951 WP_229939089.1 type II secretion system F family protein -
LOE41_RS19950 (LOE41_19945) 144697..145665 - 969 WP_229944110.1 hypothetical protein VF
LOE41_RS19955 (LOE41_19950) 145662..146942 - 1281 WP_229940641.1 Putative conjugal transfer protein VF
LOE41_RS19960 (LOE41_19955) 147197..148438 - 1242 WP_224557981.1 hypothetical protein -
LOE41_RS19965 (LOE41_19960) 148460..148999 - 540 WP_224557980.1 CpaD family pilus assembly protein -
LOE41_RS19970 (LOE41_19965) 149002..149520 - 519 WP_229943249.1 Type II secretion system protein D VF
LOE41_RS19975 (LOE41_19970) 149442..150356 - 915 WP_229943251.1 pilus assembly protein N-terminal domain-containing protein -
LOE41_RS19980 (LOE41_19975) 150378..151298 - 921 WP_229940643.1 Flp pilus assembly protein CpaB -
LOE41_RS19985 (LOE41_19980) 151344..151532 - 189 WP_224558006.1 Flp family type IVb pilin -
LOE41_RS19990 (LOE41_19985) 152088..152642 - 555 WP_224558005.1 hypothetical protein -
LOE41_RS19995 (LOE41_19990) 154280..154387 - 108 Protein_154 transposase -
LOE41_RS20000 (LOE41_19995) 154602..156128 - 1527 WP_224558022.1 IS66 family transposase ISAzs18 Transposase
LOE41_RS20005 (LOE41_20000) 156207..156554 - 348 WP_224558021.1 IS66 family transposase ISAzs18 Transposase
LOE41_RS20010 (LOE41_20005) 156551..156829 - 279 WP_229939064.1 IS66 family transposase ISSme3 Transposase
LOE41_RS20015 (LOE41_20015) 158124..158345 - 222 WP_224557965.1 hypothetical protein -
LOE41_RS20020 (LOE41_20020) 158348..159979 - 1632 WP_224557964.1 IS66 family transposase ISRel24 Transposase
LOE41_RS20025 (LOE41_20025) 160040..160390 - 351 WP_224557963.1 IS66 family transposase ISRel24 Transposase
LOE41_RS20030 (LOE41_20030) 160390..160791 - 402 WP_224557962.1 IS66 family transposase ISRel24 Transposase
LOE41_RS20035 (LOE41_20035) 161511..164729 - 3219 WP_229940777.1 type II CRISPR RNA-guided endonuclease Cas9 -
LOE41_RS20040 (LOE41_20040) 165294..165455 + 162 WP_224557958.1 IS256 family transposase ISPa1328 Transposase
LOE41_RS20045 (LOE41_20045) 165543..166307 - 765 WP_224558013.1 IS21 family transposase ISFK1 Transposase
LOE41_RS20050 (LOE41_20050) 166322..167862 - 1541 Protein_165 IS21 family transposase ISFK1 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance