MGE detailed information
MGE type: Genomic_island MGE length: 8873 bp
Accession: NZ_CP086678 Location: 1557535..1566407 Organism: Escherichia coli strain EFF60 Replicon: chromosome
Accession: NZ_CP086678 Location: 1557535..1566407 Organism: Escherichia coli strain EFF60 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMF34_RS07460 (1554205) | 1554205..1555662 | + | 1458 | WP_000856827.1 | dipeptide/tripeptide permease DtpC | - |
| LMF34_RS07465 (1555899) | 1555899..1557416 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| LMF34_RS07470 (1557535) | 1557535..1557708 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| LMF34_RS07475 (1557736) | 1557736..1558032 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| LMF34_RS07480 (1558261) | 1558261..1558533 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| LMF34_RS07485 (1558545) | 1558545..1558775 | - | 231 | WP_000373291.1 | 4Fe-4S mono-cluster protein YjdI | - |
| LMF34_RS07490 (1558956) | 1558956..1560587 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| LMF34_RS07495 (1560584) | 1560584..1561303 | + | 720 | WP_000611288.1 | Transcriptional regulatory protein DcuR | VF |
| LMF34_RS07500 (1561874) | 1561874..1563214 | + | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
| LMF34_RS07505 (1563292) | 1563292..1564938 | + | 1647 | WP_001522262.1 | class I fumarate hydratase | - |
| LMF34_RS07510 (1565061) | 1565061..1565690 | + | 630 | WP_001522260.1 | DUF2238 domain-containing protein | - |
| LMF34_RS07515 (1565829) | 1565829..1566071 | - | 243 | Protein_1468 | melibiose:sodium transporter MelB | - |
| LMF34_RS07520 (1566144) | 1566144..1567264 | + | 1121 | WP_136681669.1 | IS3-like element ISSen4 family transposase | - |
| LMF34_RS07525 (1567294) | 1567294..1568475 | - | 1182 | Protein_1470 | melibiose:sodium transporter MelB | - |
| LMF34_RS07530 (1568578) | 1568578..1569933 | - | 1356 | WP_000986622.1 | alpha-galactosidase | - |
| LMF34_RS07535 (1570216) | 1570216..1571124 | + | 909 | WP_001030801.1 | transcriptional regulator MelR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|