MGE detailed information
MGE type: Prophage MGE length: 127017 bp
Accession: NZ_CP086659 Location: 869795..996811 Organism: Staphylococcus capitis strain XZ03 Replicon: chromosome
Accession: NZ_CP086659 Location: 869795..996811 Organism: Staphylococcus capitis strain XZ03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LN243_RS04120 | 865168..865629 | + | 462 | WP_168992761.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| LN243_RS04125 | 865610..866272 | + | 663 | WP_002436924.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| LN243_RS04130 | 866245..866706 | + | 462 | WP_002436921.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| LN243_RS04135 | 866703..867731 | + | 1029 | WP_030063841.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| LN243_RS04140 | 867837..869453 | - | 1617 | WP_023349997.1 | DNA mismatch repair protein MutS | - |
| LN243_RS04145 | 869795..871732 | - | 1938 | WP_023349998.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| LN243_RS04150 | 872089..872730 | + | 642 | WP_002436898.1 | redox-sensing transcriptional repressor Rex | - |
| LN243_RS04155 | 872819..873106 | + | 288 | WP_002436909.1 | hypothetical protein | - |
| LN243_RS04160 | 873188..873487 | + | 300 | Protein_815 | YeeE/YedE thiosulfate transporter family protein | - |
| LN243_RS04165 | 873805..874410 | + | 606 | WP_002504807.1 | LPXTG cell wall anchor domain-containing protein | - |
| LN243_RS04170 | 874553..876199 | + | 1647 | WP_002504808.1 | hypothetical protein | - |
| LN243_RS04175 | 876338..876514 | + | 177 | WP_002504809.1 | hypothetical protein | - |
| LN243_RS04180 | 876894..877094 | + | 201 | WP_002504810.1 | hypothetical protein | - |
| LN243_RS04185 | 877170..878672 | - | 1503 | WP_002504811.1 | N-acetylmuramoyl-L-alanine amidase | - |
| LN243_RS04190 | 878749..881142 | - | 2394 | WP_002504812.1 | SGNH/GDSL hydrolase family protein | - |
| LN243_RS04195 | 881194..881523 | - | 330 | WP_002504813.1 | phage holin | - |
| LN243_RS04200 | 881545..882057 | - | 513 | WP_002504814.1 | hypothetical protein | - |
| LN243_RS04205 | 882039..882503 | - | 465 | WP_223875928.1 | hypothetical protein | - |
| LN243_RS04210 | 882547..885216 | - | 2670 | WP_002504816.1 | tail fiber domain-containing protein | - |
| LN243_RS04215 | 885258..885425 | - | 168 | WP_002504817.1 | hypothetical protein | - |
| LN243_RS04220 | 885418..885792 | - | 375 | WP_002504818.1 | hypothetical protein | - |
| LN243_RS04225 | 885795..893840 | - | 8046 | WP_002504819.1 | hypothetical protein | - |
| LN243_RS04230 | 893901..895982 | - | 2082 | WP_002504820.1 | hypothetical protein | - |
| LN243_RS04235 | 896004..904277 | - | 8274 | WP_010959246.1 | phage tail tape measure protein | - |
| LN243_RS04240 | 904374..905390 | - | 1017 | WP_010959245.1 | site-specific integrase | - |
| LN243_RS04245 | 905406..905879 | - | 474 | WP_002504823.1 | hypothetical protein | - |
| LN243_RS04250 | 905879..906436 | - | 558 | WP_000700062.1 | hypothetical protein | - |
| LN243_RS04255 | 906520..907311 | - | 792 | WP_002504825.1 | hypothetical protein | - |
| LN243_RS04260 | 907350..908222 | - | 873 | WP_000391855.1 | hypothetical protein | - |
| LN243_RS04265 | 908228..908749 | - | 522 | WP_001177112.1 | hypothetical protein | - |
| LN243_RS04270 | 908739..909404 | - | 666 | WP_000384369.1 | hypothetical protein | - |
| LN243_RS04275 | 909408..909689 | - | 282 | WP_227489983.1 | hypothetical protein | - |
| LN243_RS04280 | 909715..910149 | - | 435 | WP_000134539.1 | hypothetical protein | - |
| LN243_RS04285 | 910167..910718 | - | 552 | WP_000985467.1 | hypothetical protein | - |
| LN243_RS04290 | 910793..911794 | - | 1002 | WP_002504827.1 | hypothetical protein | - |
| LN243_RS04295 | 911833..912273 | - | 441 | WP_002504828.1 | hypothetical protein | - |
| LN243_RS04300 | 912301..913680 | - | 1380 | WP_002504829.1 | hypothetical protein | - |
| LN243_RS04305 | 913673..915235 | - | 1563 | WP_000389594.1 | hypothetical protein | - |
| LN243_RS04310 | 915253..917052 | - | 1800 | WP_002504830.1 | terminase family protein | - |
| LN243_RS04315 | 917045..917929 | - | 885 | WP_001007716.1 | hypothetical protein | - |
| LN243_RS04320 | 919624..920808 | - | 1185 | WP_002504831.1 | hypothetical protein | - |
| LN243_RS04325 | 920817..921002 | - | 186 | WP_000057341.1 | YonK family protein | - |
| LN243_RS04330 | 921028..921357 | - | 330 | WP_002504832.1 | HU family DNA-binding protein | - |
| LN243_RS04335 | 921617..923113 | - | 1497 | WP_002504833.1 | hypothetical protein | - |
| LN243_RS04340 | 923249..925534 | + | 2286 | WP_000409961.1 | AAA family ATPase | - |
| LN243_RS04345 | 925570..926445 | + | 876 | WP_002504834.1 | hypothetical protein | - |
| LN243_RS04350 | 930340..930624 | + | 285 | WP_002504554.1 | hypothetical protein | - |
| LN243_RS04355 | 930804..931019 | + | 216 | WP_002504552.1 | hypothetical protein | - |
| LN243_RS04360 | 931094..931354 | + | 261 | WP_010959242.1 | hypothetical protein | - |
| LN243_RS04365 | 931491..931880 | + | 390 | WP_010959241.1 | hypothetical protein | - |
| LN243_RS04370 | 932033..932692 | + | 660 | WP_002504625.1 | antirestriction protein ArdA | - |
| LN243_RS04375 | 932736..933059 | + | 324 | WP_002504624.1 | hypothetical protein | - |
| LN243_RS04380 | 933152..933415 | + | 264 | WP_002504623.1 | hypothetical protein | - |
| LN243_RS04385 | 933444..934124 | + | 681 | WP_010959240.1 | hypothetical protein | - |
| LN243_RS04390 | 934240..934692 | + | 453 | WP_010959239.1 | hypothetical protein | - |
| LN243_RS04395 | 934692..935213 | + | 522 | WP_012099556.1 | hypothetical protein | - |
| LN243_RS04400 | 935291..935719 | + | 429 | WP_002504685.1 | hypothetical protein | - |
| LN243_RS04405 | 936403..937446 | + | 1044 | WP_002504683.1 | site-specific integrase | - |
| LN243_RS04410 | 937757..939037 | + | 1281 | WP_002504682.1 | DNA sulfur modification protein DndB | - |
| LN243_RS04415 | 939049..940053 | + | 1005 | WP_002504681.1 | hypothetical protein | - |
| LN243_RS04420 | 940213..940461 | + | 249 | WP_002504680.1 | hypothetical protein | - |
| LN243_RS04425 | 940477..940965 | + | 489 | WP_002504679.1 | hypothetical protein | - |
| LN243_RS04430 | 940983..941663 | + | 681 | WP_000668931.1 | hypothetical protein | - |
| LN243_RS04435 | 941707..942666 | + | 960 | WP_000852323.1 | hypothetical protein | - |
| LN243_RS04440 | 942790..943758 | + | 969 | WP_002504678.1 | ATP-binding protein | - |
| LN243_RS04445 | 943835..944353 | + | 519 | WP_002504677.1 | hypothetical protein | - |
| LN243_RS04450 | 944375..945907 | + | 1533 | WP_002504676.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| LN243_RS04455 | 945924..946100 | + | 177 | WP_168992768.1 | hypothetical protein | - |
| LN243_RS04460 | 946128..946802 | - | 675 | WP_001106019.1 | IS6-like element IS257 family transposase | - |
| LN243_RS04465 | 946827..947024 | - | 198 | WP_229346796.1 | hypothetical protein | - |
| LN243_RS04470 | 947217..948983 | - | 1767 | WP_010959235.1 | single-stranded DNA-binding protein | - |
| LN243_RS04475 | 948986..949924 | - | 939 | WP_229346805.1 | hypothetical protein | - |
| LN243_RS04480 | 950007..950681 | + | 675 | WP_001106019.1 | IS6-like element IS257 family transposase | - |
| LN243_RS04485 | 950979..951347 | - | 369 | WP_229346797.1 | hypothetical protein | - |
| LN243_RS04490 | 951393..952067 | - | 675 | WP_001106019.1 | IS6-like element IS257 family transposase | - |
| LN243_RS04495 | 952181..953137 | + | 957 | WP_000282655.1 | thymidylate synthase | - |
| LN243_RS04500 | 953179..953664 | + | 486 | WP_000175735.1 | trimethoprim-resistant dihydrofolate reductase DfrS1 | - |
| LN243_RS04505 | 953802..954224 | + | 423 | Protein_884 | DegV family protein | - |
| LN243_RS04510 | 954280..954954 | - | 675 | WP_001106022.1 | IS6-like element IS257 family transposase | - |
| LN243_RS04515 | 954998..956044 | + | 1047 | WP_002504581.1 | hypothetical protein | - |
| LN243_RS04520 | 956055..956252 | + | 198 | WP_002504580.1 | hypothetical protein | - |
| LN243_RS04525 | 956265..956540 | + | 276 | WP_002504579.1 | hypothetical protein | - |
| LN243_RS04530 | 956832..957140 | + | 309 | WP_002504577.1 | hypothetical protein | - |
| LN243_RS04535 | 957143..957406 | + | 264 | WP_000312937.1 | hypothetical protein | - |
| LN243_RS04540 | 957446..957856 | + | 411 | WP_002504576.1 | YopX family protein | - |
| LN243_RS04545 | 957853..958200 | + | 348 | WP_000862563.1 | thermonuclease family protein | - |
| LN243_RS04550 | 958206..958430 | + | 225 | WP_000359469.1 | hypothetical protein | - |
| LN243_RS04555 | 958452..958691 | + | 240 | WP_002504575.1 | hypothetical protein | - |
| LN243_RS04560 | 958714..958989 | + | 276 | WP_002504574.1 | hypothetical protein | - |
| LN243_RS04565 | 959011..959277 | + | 267 | WP_002504573.1 | hypothetical protein | - |
| LN243_RS04570 | 959282..959485 | + | 204 | WP_002504572.1 | hypothetical protein | - |
| LN243_RS04575 | 959492..959680 | + | 189 | WP_002504571.1 | Lar family restriction alleviation protein | - |
| LN243_RS04580 | 959682..960164 | + | 483 | WP_030063552.1 | hypothetical protein | - |
| LN243_RS04585 | 960180..960359 | + | 180 | WP_002504569.1 | hypothetical protein | - |
| LN243_RS04590 | 960344..960529 | + | 186 | WP_001187008.1 | hypothetical protein | - |
| LN243_RS04595 | 960545..960829 | + | 285 | WP_002504568.1 | hypothetical protein | - |
| LN243_RS04600 | 960826..960981 | + | 156 | WP_002504567.1 | transcriptional activator RinB | - |
| LN243_RS04605 | 961007..961279 | + | 273 | WP_002504566.1 | hypothetical protein | - |
| LN243_RS04610 | 961295..961837 | + | 543 | WP_002504565.1 | hypothetical protein | - |
| LN243_RS04615 | 961830..962006 | + | 177 | WP_002504564.1 | hypothetical protein | - |
| LN243_RS04620 | 962026..962247 | + | 222 | WP_002504563.1 | hypothetical protein | - |
| LN243_RS04625 | 962247..962972 | + | 726 | WP_010959229.1 | metallophosphoesterase | - |
| LN243_RS04630 | 962965..963282 | + | 318 | WP_002504561.1 | hypothetical protein | - |
| LN243_RS04635 | 963282..963932 | + | 651 | WP_002504560.1 | hypothetical protein | - |
| LN243_RS04640 | 963932..964450 | + | 519 | WP_002504559.1 | metallophosphoesterase | - |
| LN243_RS04645 | 964613..964843 | + | 231 | WP_002504558.1 | addiction module antitoxin | Antitoxin Detail |
| LN243_RS04650 | 964843..965238 | + | 396 | WP_002504557.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LN243_RS04655 | 965541..965732 | + | 192 | WP_002504556.1 | hypothetical protein | - |
| LN243_RS04660 | 965716..965985 | + | 270 | WP_000755772.1 | hypothetical protein | - |
| LN243_RS04665 | 966042..966536 | + | 495 | WP_010959224.1 | hypothetical protein | - |
| LN243_RS04670 | 966540..967340 | + | 801 | WP_000686449.1 | metallophosphoesterase | - |
| LN243_RS04675 | 967449..968171 | + | 723 | WP_002504538.1 | hypothetical protein | - |
| LN243_RS04680 | 968277..968918 | + | 642 | WP_002504537.1 | hypothetical protein | - |
| LN243_RS12620 | 968949..969083 | - | 135 | WP_002504536.1 | hypothetical protein | - |
| LN243_RS04685 | 969166..969570 | - | 405 | WP_002504535.1 | YolD-like family protein | - |
| LN243_RS04690 | 969923..970483 | - | 561 | WP_002504534.1 | hypothetical protein | - |
| LN243_RS04695 | 970650..971024 | + | 375 | WP_002504533.1 | hypothetical protein | - |
| LN243_RS04700 | 971037..972485 | + | 1449 | WP_030063636.1 | PHP domain-containing protein | - |
| LN243_RS04705 | 972948..975434 | + | 2487 | WP_002504531.1 | hypothetical protein | - |
| LN243_RS04710 | 975564..975926 | + | 363 | WP_016187713.1 | hypothetical protein | - |
| LN243_RS04715 | 976064..976378 | + | 315 | WP_002504529.1 | hypothetical protein | - |
| LN243_RS04720 | 976388..977686 | + | 1299 | WP_010959221.1 | ATP-dependent DNA ligase | - |
| LN243_RS04725 | 977774..978163 | + | 390 | WP_002504527.1 | hypothetical protein | - |
| LN243_RS04730 | 978277..978450 | + | 174 | WP_000119719.1 | hypothetical protein | - |
| LN243_RS04735 | 978462..978728 | + | 267 | WP_002504526.1 | hypothetical protein | - |
| LN243_RS04740 | 978721..979008 | + | 288 | WP_002504525.1 | hypothetical protein | - |
| LN243_RS04745 | 978989..979312 | + | 324 | WP_002504524.1 | hypothetical protein | - |
| LN243_RS04750 | 979318..979569 | + | 252 | WP_000865652.1 | hypothetical protein | - |
| LN243_RS04755 | 979569..979751 | + | 183 | WP_002504522.1 | hypothetical protein | - |
| LN243_RS04760 | 979766..980377 | + | 612 | WP_002504521.1 | nucleoside 2-deoxyribosyltransferase | - |
| LN243_RS04765 | 980370..980561 | + | 192 | WP_002504520.1 | hypothetical protein | - |
| LN243_RS04770 | 980551..981237 | + | 687 | WP_002504519.1 | methyltransferase domain-containing protein | - |
| LN243_RS04775 | 981243..982250 | + | 1008 | WP_010959219.1 | DNA (cytosine-5-)-methyltransferase | - |
| LN243_RS04780 | 982283..982636 | + | 354 | WP_000792728.1 | hypothetical protein | - |
| LN243_RS04785 | 982639..982821 | + | 183 | WP_000356944.1 | hypothetical protein | - |
| LN243_RS04790 | 982835..983065 | + | 231 | WP_000824898.1 | hypothetical protein | - |
| LN243_RS04795 | 983065..983661 | + | 597 | WP_002504517.1 | hypothetical protein | - |
| LN243_RS04800 | 983787..984296 | + | 510 | WP_002504516.1 | siphovirus Gp157 family protein | - |
| LN243_RS04805 | 984308..985009 | + | 702 | WP_010959216.1 | hypothetical protein | - |
| LN243_RS04810 | 985028..985180 | + | 153 | WP_002504514.1 | hypothetical protein | - |
| LN243_RS04815 | 985210..985623 | + | 414 | WP_002504513.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| LN243_RS04820 | 985623..986069 | + | 447 | WP_002504512.1 | hypothetical protein | - |
| LN243_RS04825 | 986091..988997 | + | 2907 | Protein_949 | intein-containing class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| LN243_RS04830 | 989154..989978 | + | 825 | WP_030063622.1 | HNH endonuclease | - |
| LN243_RS04835 | 990157..990525 | + | 369 | Protein_951 | intein-containing ribonucleoside-diphosphate reductase subunit alpha | - |
| LN243_RS04840 | 990571..991593 | + | 1023 | WP_030063619.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| LN243_RS04845 | 991621..992223 | + | 603 | WP_002504508.1 | AAA family ATPase | - |
| LN243_RS04850 | 992264..992512 | + | 249 | WP_002504507.1 | thioredoxin family protein | - |
| LN243_RS04855 | 992528..992767 | + | 240 | WP_002504506.1 | hypothetical protein | - |
| LN243_RS04860 | 992780..993526 | + | 747 | WP_002504505.1 | NTP pyrophosphohydrolase | - |
| LN243_RS04865 | 993528..993923 | + | 396 | WP_002504504.1 | hypothetical protein | - |
| LN243_RS04870 | 993907..994500 | + | 594 | WP_001130902.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LN243_RS04875 | 994702..995283 | + | 582 | WP_002504503.1 | SANT/Myb-like DNA-binding domain-containing protein | - |
| LN243_RS04880 | 995273..996811 | + | 1539 | WP_001260014.1 | recombinase family protein | - |
| LN243_RS04885 | 996886..997683 | + | 798 | Protein_961 | YeeE/YedE family protein | - |
| LN243_RS04890 | 997702..997926 | + | 225 | WP_023350000.1 | sulfurtransferase TusA family protein | - |
| LN243_RS04895 | 998104..999354 | + | 1251 | WP_023350001.1 | ammonium transporter | - |
| LN243_RS04900 | 999499..1000449 | + | 951 | WP_023350002.1 | LacI family DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|