MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP086627 Location: 4103097..4113855 Organism: Escherichia coli strain RIVM_C036569 Replicon: chromosome
Accession: NZ_CP086627 Location: 4103097..4113855 Organism: Escherichia coli strain RIVM_C036569 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LN356_RS19905 (4098443) | 4098443..4099225 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| LN356_RS19910 (4099541) | 4099541..4102750 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| LN356_RS19915 (4103097) | 4103097..4103567 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| LN356_RS19920 (4103564) | 4103564..4103666 | + | 103 | Protein_3909 | helix-turn-helix domain-containing protein | - |
| LN356_RS19925 (4103758) | 4103758..4103916 | + | 159 | Protein_3910 | integrase | - |
| LN356_RS19935 (4104121) | 4104121..4105374 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LN356_RS19940 (4105386) | 4105386..4106489 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LN356_RS19945 (4106777) | 4106777..4107832 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| LN356_RS19950 (4107871) | 4107871..4108272 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (4108990) | 4108990..4109070 | - | 81 | NuclAT_10 | - | - |
| - (4108990) | 4108990..4109070 | - | 81 | NuclAT_10 | - | - |
| - (4108990) | 4108990..4109070 | - | 81 | NuclAT_10 | - | - |
| - (4108990) | 4108990..4109070 | - | 81 | NuclAT_10 | - | - |
| LN356_RS19955 (4108330) | 4108330..4109574 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| LN356_RS19960 (4109666) | 4109666..4110124 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LN356_RS19965 (4110385) | 4110385..4111842 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| LN356_RS19970 (4111899) | 4111899..4112251 | - | 353 | Protein_3918 | peptide chain release factor H | - |
| LN356_RS19975 (4112247) | 4112247..4112453 | - | 207 | Protein_3919 | RtcB family protein | - |
| LN356_RS19980 (4112699) | 4112699..4113151 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| LN356_RS19985 (4113161) | 4113161..4113559 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LN356_RS19990 (4113562) | 4113562..4113855 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LN356_RS19995 (4113907) | 4113907..4114962 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| LN356_RS20000 (4115033) | 4115033..4115818 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| LN356_RS20005 (4115790) | 4115790..4117502 | + | 1713 | Protein_3925 | flagellar biosynthesis protein FlhA | - |
| LN356_RS20010 (4117607) | 4117607..4117885 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| LN356_RS20015 (4117878) | 4117878..4118234 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|