MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP086626 Location: 4132768..4143526 Organism: Escherichia coli strain RIVM_C037134 Replicon: chromosome
Accession: NZ_CP086626 Location: 4132768..4143526 Organism: Escherichia coli strain RIVM_C037134 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LN362_RS20155 (4128114) | 4128114..4128896 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| LN362_RS20160 (4129212) | 4129212..4132421 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| LN362_RS20165 (4132768) | 4132768..4133238 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| LN362_RS20170 (4133235) | 4133235..4133337 | + | 103 | Protein_3957 | helix-turn-helix domain-containing protein | - |
| LN362_RS20175 (4133429) | 4133429..4133587 | + | 159 | Protein_3958 | integrase | - |
| LN362_RS20185 (4133792) | 4133792..4135045 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LN362_RS20190 (4135057) | 4135057..4136160 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LN362_RS20195 (4136448) | 4136448..4137503 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| LN362_RS20200 (4137542) | 4137542..4137943 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (4138661) | 4138661..4138741 | - | 81 | NuclAT_10 | - | - |
| - (4138661) | 4138661..4138741 | - | 81 | NuclAT_10 | - | - |
| - (4138661) | 4138661..4138741 | - | 81 | NuclAT_10 | - | - |
| - (4138661) | 4138661..4138741 | - | 81 | NuclAT_10 | - | - |
| LN362_RS20205 (4138001) | 4138001..4139245 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| LN362_RS20210 (4139337) | 4139337..4139795 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LN362_RS20215 (4140056) | 4140056..4141513 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| LN362_RS20220 (4141570) | 4141570..4141922 | - | 353 | Protein_3966 | peptide chain release factor H | - |
| LN362_RS20225 (4141918) | 4141918..4142124 | - | 207 | Protein_3967 | RtcB family protein | - |
| LN362_RS20230 (4142370) | 4142370..4142822 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| LN362_RS20235 (4142832) | 4142832..4143230 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LN362_RS20240 (4143233) | 4143233..4143526 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LN362_RS20245 (4143578) | 4143578..4144633 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| LN362_RS20250 (4144704) | 4144704..4145489 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| LN362_RS20255 (4145461) | 4145461..4147173 | + | 1713 | Protein_3973 | flagellar biosynthesis protein FlhA | - |
| LN362_RS20260 (4147278) | 4147278..4147556 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| LN362_RS20265 (4147549) | 4147549..4147905 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|