MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP086625 Location: 4161214..4171972 Organism: Escherichia coli strain RIVM_C037166 Replicon: chromosome
Accession: NZ_CP086625 Location: 4161214..4171972 Organism: Escherichia coli strain RIVM_C037166 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LN360_RS20370 (4156560) | 4156560..4157342 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| LN360_RS20375 (4157658) | 4157658..4160867 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| LN360_RS20380 (4161214) | 4161214..4161684 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| LN360_RS20385 (4161681) | 4161681..4161783 | + | 103 | Protein_3997 | helix-turn-helix domain-containing protein | - |
| LN360_RS20390 (4161875) | 4161875..4162033 | + | 159 | Protein_3998 | integrase | - |
| LN360_RS20400 (4162238) | 4162238..4163491 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LN360_RS20405 (4163503) | 4163503..4164606 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LN360_RS20410 (4164894) | 4164894..4165949 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| LN360_RS20415 (4165988) | 4165988..4166389 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (4167107) | 4167107..4167187 | - | 81 | NuclAT_10 | - | - |
| - (4167107) | 4167107..4167187 | - | 81 | NuclAT_10 | - | - |
| - (4167107) | 4167107..4167187 | - | 81 | NuclAT_10 | - | - |
| - (4167107) | 4167107..4167187 | - | 81 | NuclAT_10 | - | - |
| LN360_RS20420 (4166447) | 4166447..4167691 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| LN360_RS20425 (4167783) | 4167783..4168241 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LN360_RS20430 (4168502) | 4168502..4169959 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| LN360_RS20435 (4170016) | 4170016..4170368 | - | 353 | Protein_4006 | peptide chain release factor H | - |
| LN360_RS20440 (4170364) | 4170364..4170570 | - | 207 | Protein_4007 | RtcB family protein | - |
| LN360_RS20445 (4170816) | 4170816..4171268 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| LN360_RS20450 (4171278) | 4171278..4171676 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LN360_RS20455 (4171679) | 4171679..4171972 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LN360_RS20460 (4172024) | 4172024..4173079 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| LN360_RS20465 (4173150) | 4173150..4173935 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| LN360_RS20470 (4173907) | 4173907..4175619 | + | 1713 | Protein_4013 | flagellar biosynthesis protein FlhA | - |
| LN360_RS20475 (4175724) | 4175724..4176002 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| LN360_RS20480 (4175995) | 4175995..4176351 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|