MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP086624 Location: 4142952..4153710 Organism: Escherichia coli strain RIVM_C037791 Replicon: chromosome
Accession: NZ_CP086624 Location: 4142952..4153710 Organism: Escherichia coli strain RIVM_C037791 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LN354_RS20220 (4138298) | 4138298..4139080 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| LN354_RS20225 (4139396) | 4139396..4142605 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| LN354_RS20230 (4142952) | 4142952..4143422 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| LN354_RS20235 (4143419) | 4143419..4143521 | + | 103 | Protein_3969 | helix-turn-helix domain-containing protein | - |
| LN354_RS20240 (4143613) | 4143613..4143771 | + | 159 | Protein_3970 | integrase | - |
| LN354_RS20250 (4143976) | 4143976..4145229 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LN354_RS20255 (4145241) | 4145241..4146344 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LN354_RS20260 (4146632) | 4146632..4147687 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| LN354_RS20265 (4147726) | 4147726..4148127 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (4148845) | 4148845..4148925 | - | 81 | NuclAT_10 | - | - |
| - (4148845) | 4148845..4148925 | - | 81 | NuclAT_10 | - | - |
| - (4148845) | 4148845..4148925 | - | 81 | NuclAT_10 | - | - |
| - (4148845) | 4148845..4148925 | - | 81 | NuclAT_10 | - | - |
| LN354_RS20270 (4148185) | 4148185..4149429 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| LN354_RS20275 (4149521) | 4149521..4149979 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LN354_RS20280 (4150240) | 4150240..4151697 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| LN354_RS20285 (4151754) | 4151754..4152106 | - | 353 | Protein_3978 | peptide chain release factor H | - |
| LN354_RS20290 (4152102) | 4152102..4152308 | - | 207 | Protein_3979 | RtcB family protein | - |
| LN354_RS20295 (4152554) | 4152554..4153006 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| LN354_RS20300 (4153016) | 4153016..4153414 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LN354_RS20305 (4153417) | 4153417..4153710 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LN354_RS20310 (4153762) | 4153762..4154817 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| LN354_RS20315 (4154888) | 4154888..4155673 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| LN354_RS20320 (4155645) | 4155645..4157357 | + | 1713 | Protein_3985 | flagellar biosynthesis protein FlhA | - |
| LN354_RS20325 (4157462) | 4157462..4157740 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| LN354_RS20330 (4157733) | 4157733..4158089 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|