MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP086618 Location: 4112331..4123089 Organism: Escherichia coli strain RIVM_C039227 Replicon: chromosome
Accession: NZ_CP086618 Location: 4112331..4123089 Organism: Escherichia coli strain RIVM_C039227 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LN355_RS19990 (4107677) | 4107677..4108459 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| LN355_RS19995 (4108775) | 4108775..4111984 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| LN355_RS20000 (4112331) | 4112331..4112801 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| LN355_RS20005 (4112798) | 4112798..4112900 | + | 103 | Protein_3923 | helix-turn-helix domain-containing protein | - |
| LN355_RS20010 (4112992) | 4112992..4113150 | + | 159 | Protein_3924 | integrase | - |
| LN355_RS20020 (4113355) | 4113355..4114608 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LN355_RS20025 (4114620) | 4114620..4115723 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LN355_RS20030 (4116011) | 4116011..4117066 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| LN355_RS20035 (4117105) | 4117105..4117506 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (4118224) | 4118224..4118304 | - | 81 | NuclAT_10 | - | - |
| - (4118224) | 4118224..4118304 | - | 81 | NuclAT_10 | - | - |
| - (4118224) | 4118224..4118304 | - | 81 | NuclAT_10 | - | - |
| - (4118224) | 4118224..4118304 | - | 81 | NuclAT_10 | - | - |
| LN355_RS20040 (4117564) | 4117564..4118808 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| LN355_RS20045 (4118900) | 4118900..4119358 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LN355_RS20050 (4119619) | 4119619..4121076 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| LN355_RS20055 (4121133) | 4121133..4121485 | - | 353 | Protein_3932 | peptide chain release factor H | - |
| LN355_RS20060 (4121481) | 4121481..4121687 | - | 207 | Protein_3933 | RtcB family protein | - |
| LN355_RS20065 (4121933) | 4121933..4122385 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| LN355_RS20070 (4122395) | 4122395..4122793 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LN355_RS20075 (4122796) | 4122796..4123089 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LN355_RS20080 (4123141) | 4123141..4124196 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| LN355_RS20085 (4124267) | 4124267..4125052 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| LN355_RS20090 (4125024) | 4125024..4126736 | + | 1713 | Protein_3939 | flagellar biosynthesis protein FlhA | - |
| LN355_RS20095 (4126841) | 4126841..4127119 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| LN355_RS20100 (4127112) | 4127112..4127468 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|