MGE detailed information
MGE type: Prophage MGE length: 25285 bp
Accession: NZ_CP086616 Location: 2310183..2335467 Organism: Escherichia coli strain RIVM_C039629 Replicon: chromosome
Accession: NZ_CP086616 Location: 2310183..2335467 Organism: Escherichia coli strain RIVM_C039629 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LN353_RS11115 () | 2306327..2308138 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| LN353_RS11120 () | 2308175..2308816 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LN353_RS11125 () | 2308871..2310049 | - | 1179 | WP_001551236.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LN353_RS11130 () | 2310183..2310473 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| LN353_RS11135 () | 2310540..2310896 | + | 357 | WP_001295500.1 | protein YebF | - |
| LN353_RS11140 () | 2311223..2311882 | + | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| LN353_RS11145 () | 2312046..2313215 | - | 1170 | WP_001551234.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| LN353_RS11150 () | 2313272..2313697 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| LN353_RS11155 () | 2313854..2315914 | + | 2061 | WP_001551233.1 | oligopeptidase B | - |
| LN353_RS11160 () | 2315911..2316573 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| LN353_RS11165 () | 2316597..2317253 | - | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein YobB | - |
| LN353_RS11170 () | 2317355..2317585 | - | 231 | WP_000916760.1 | DNA polymerase III subunit theta | - |
| LN353_RS11175 () | 2317724..2318098 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| LN353_RS11180 () | 2318102..2318974 | + | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| LN353_RS11185 () | 2318987..2319328 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 2319356..2319627 | - | 272 | - | - | Antitoxin Detail |
| - | 2319486..2319589 | + | 104 | - | - | Toxin Detail |
| LN353_RS11190 () | 2319724..2320380 | + | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| LN353_RS11195 () | 2320381..2320572 | - | 192 | WP_001296140.1 | YebW family protein | - |
| LN353_RS11200 () | 2320677..2320913 | - | 237 | WP_001295499.1 | YebV family protein | - |
| LN353_RS11205 () | 2321031..2322470 | - | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LN353_RS11210 () | 2322550..2325183 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| LN353_RS11215 () | 2325152..2326435 | - | 1284 | WP_001316436.1 | membrane integrity lipid transport subunit YebS | - |
| LN353_RS11220 () | 2326565..2327062 | + | 498 | WP_001043876.1 | L-methionine (R)-S-oxide reductase | - |
| LN353_RS11225 () | 2327159..2327857 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| LN353_RS11230 () | 2327877..2329925 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| LN353_RS11235 () | 2330117..2330998 | + | 882 | WP_000984517.1 | protease HtpX | - |
| LN353_RS11240 () | 2331044..2332417 | - | 1374 | WP_001551227.1 | MFS transporter | - |
| LN353_RS11245 () | 2332594..2333385 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| LN353_RS11250 () | 2333529..2333768 | - | 240 | WP_001211011.1 | YobH family protein | - |
| LN353_RS11255 () | 2333927..2334070 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| LN353_RS11260 () | 2334145..2334432 | + | 288 | WP_001006855.1 | YebO family protein | - |
| LN353_RS11265 () | 2335102..2335245 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| LN353_RS11270 () | 2335258..2335467 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LN353_RS11275 () | 2335633..2336442 | + | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LN353_RS11280 () | 2336439..2337005 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| LN353_RS11285 () | 2337434..2337892 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| LN353_RS11290 () | 2337947..2338798 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| LN353_RS11295 () | 2338811..2339611 | - | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|