MGE detailed information
MGE type: IScluster/Tn MGE length: 10205 bp
Accession: NZ_CP086609 Location: 15770..25974 Organism: Escherichia fergusonii strain EF20JDJ4045 Replicon: plasmid pEF45-5
Accession: NZ_CP086609 Location: 15770..25974 Organism: Escherichia fergusonii strain EF20JDJ4045 Replicon: plasmid pEF45-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN29_RS25020 (LNN29_24970) | 10997..11134 | - | 138 | Protein_13 | IS3 family transposase | - |
| LNN29_RS25025 (LNN29_24975) | 11335..14925 | - | 3591 | WP_104920592.1 | Ig-like domain-containing protein | - |
| LNN29_RS25030 (LNN29_24980) | 15770..16204 | + | 435 | WP_000525034.1 | IS200-IS605 family transposase ISSod23 | Transposase |
| LNN29_RS25035 (LNN29_24985) | 16416..17789 | + | 1374 | WP_000244368.1 | IS4 family transposase ISEc13 | Transposase |
| LNN29_RS25040 (LNN29_24990) | 17889..18938 | - | 1050 | Protein_17 | IS4 family transposase ISCro3 | Transposase |
| LNN29_RS25045 (LNN29_24995) | 18938..19075 | - | 138 | Protein_18 | Lrp/AsnC family transcriptional regulator | - |
| LNN29_RS25050 (LNN29_25000) | 19192..20103 | + | 912 | WP_000549737.1 | DMT family transporter | - |
| LNN29_RS25055 (LNN29_25005) | 20088..20288 | - | 201 | Protein_20 | phage integrase family protein | - |
| LNN29_RS25060 (LNN29_25010) | 20289..20594 | - | 306 | WP_001159869.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LNN29_RS25065 (LNN29_25015) | 20596..20814 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LNN29_RS25070 (LNN29_25020) | 21873..22301 | + | 429 | Protein_23 | hypothetical protein | - |
| LNN29_RS25075 (LNN29_25025) | 22391..22987 | + | 597 | Protein_24 | IS66 family transposase ISCro1 | Transposase |
| LNN29_RS25080 (LNN29_25030) | 23265..23915 | - | 651 | Protein_25 | IS3 family transposase ISKpn38 | Transposase |
| LNN29_RS25085 (LNN29_25035) | 24793..25023 | + | 231 | WP_252990174.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| LNN29_RS25275 | 24976..25126 | + | 151 | Protein_27 | hypothetical protein | - |
| LNN29_RS25090 (LNN29_25040) | 25123..25971 | + | 849 | Protein_28 | IS66 family transposase ISShdy2 | Transposase |
| LNN29_RS25095 (LNN29_25045) | 26031..26153 | - | 123 | Protein_29 | MbeD family mobilization/exclusion protein | - |
| LNN29_RS25100 (LNN29_25050) | 26287..26559 | + | 273 | Protein_30 | IS3 family transposase | - |
| LNN29_RS25105 (LNN29_25055) | 26548..27039 | + | 492 | Protein_31 | IS6 family transposase | - |
| LNN29_RS25110 (LNN29_25060) | 27079..29787 | - | 2709 | WP_125401188.1 | IncI1-type relaxase NikB | - |
| LNN29_RS25115 (LNN29_25065) | 29798..30130 | - | 333 | WP_001284001.1 | IncI1-type relaxosome accessory protein NikA | - |
| LNN29_RS25120 (LNN29_25070) | 30365..30700 | + | 336 | WP_024133211.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|