MGE detailed information
MGE type: Mobilizable plasmid MGE length: 46074 bp
Accession: NZ_CP086609 Location: 1..46074 Organism: Escherichia fergusonii strain EF20JDJ4045 Replicon: plasmid pEF45-5
Accession: NZ_CP086609 Location: 1..46074 Organism: Escherichia fergusonii strain EF20JDJ4045 Replicon: plasmid pEF45-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN29_RS24960 (LNN29_24910) | 1511..1945 | - | 435 | WP_000900356.1 | hypothetical protein | - |
| LNN29_RS24965 (LNN29_24915) | 1952..3187 | - | 1236 | WP_158522432.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| LNN29_RS24970 (LNN29_24920) | 3211..4440 | - | 1230 | WP_000838352.1 | hypothetical protein | - |
| LNN29_RS24975 (LNN29_24925) | 4437..5234 | - | 798 | WP_002433409.1 | hypothetical protein | - |
| LNN29_RS24980 (LNN29_24930) | 5234..5692 | - | 459 | WP_012512780.1 | hypothetical protein | - |
| LNN29_RS24985 (LNN29_24935) | 6096..6527 | - | 432 | Protein_6 | IS3 family transposase ISEc48 | Transposase |
| LNN29_RS24990 (LNN29_24940) | 7445..7729 | - | 285 | WP_000974937.1 | helix-turn-helix transcriptional regulator | - |
| LNN29_RS24995 (LNN29_24945) | 7719..8039 | - | 321 | WP_000273115.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LNN29_RS25000 (LNN29_24950) | 8167..8569 | - | 403 | Protein_9 | IS110 family transposase ISSm3 | Transposase |
| LNN29_RS25005 (LNN29_24955) | 8678..9268 | + | 591 | Protein_10 | IS6 family transposase | - |
| LNN29_RS25010 (LNN29_24960) | 9298..9505 | - | 208 | Protein_11 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| LNN29_RS25015 (LNN29_24965) | 9982..10827 | + | 846 | WP_158522433.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| LNN29_RS25020 (LNN29_24970) | 10997..11134 | - | 138 | Protein_13 | IS3 family transposase | - |
| LNN29_RS25025 (LNN29_24975) | 11335..14925 | - | 3591 | WP_104920592.1 | Ig-like domain-containing protein | - |
| LNN29_RS25030 (LNN29_24980) | 15770..16204 | + | 435 | WP_000525034.1 | IS200-IS605 family transposase ISSod23 | Transposase |
| LNN29_RS25035 (LNN29_24985) | 16416..17789 | + | 1374 | WP_000244368.1 | IS4 family transposase ISEc13 | Transposase |
| LNN29_RS25040 (LNN29_24990) | 17889..18938 | - | 1050 | Protein_17 | IS4 family transposase ISCro3 | Transposase |
| LNN29_RS25045 (LNN29_24995) | 18938..19075 | - | 138 | Protein_18 | Lrp/AsnC family transcriptional regulator | - |
| LNN29_RS25050 (LNN29_25000) | 19192..20103 | + | 912 | WP_000549737.1 | DMT family transporter | - |
| LNN29_RS25055 (LNN29_25005) | 20088..20288 | - | 201 | Protein_20 | phage integrase family protein | - |
| LNN29_RS25060 (LNN29_25010) | 20289..20594 | - | 306 | WP_001159869.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LNN29_RS25065 (LNN29_25015) | 20596..20814 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LNN29_RS25070 (LNN29_25020) | 21873..22301 | + | 429 | Protein_23 | hypothetical protein | - |
| LNN29_RS25075 (LNN29_25025) | 22391..22987 | + | 597 | Protein_24 | IS66 family transposase ISCro1 | Transposase |
| LNN29_RS25080 (LNN29_25030) | 23265..23915 | - | 651 | Protein_25 | IS3 family transposase ISKpn38 | Transposase |
| LNN29_RS25085 (LNN29_25035) | 24793..25023 | + | 231 | WP_252990174.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| LNN29_RS25275 | 24976..25126 | + | 151 | Protein_27 | hypothetical protein | - |
| LNN29_RS25090 (LNN29_25040) | 25123..25971 | + | 849 | Protein_28 | IS66 family transposase ISShdy2 | Transposase |
| LNN29_RS25095 (LNN29_25045) | 26031..26153 | - | 123 | Protein_29 | MbeD family mobilization/exclusion protein | - |
| LNN29_RS25100 (LNN29_25050) | 26287..26559 | + | 273 | Protein_30 | IS3 family transposase | - |
| LNN29_RS25105 (LNN29_25055) | 26548..27039 | + | 492 | Protein_31 | IS6 family transposase | - |
| LNN29_RS25110 (LNN29_25060) | 27079..29787 | - | 2709 | WP_125401188.1 | Protein TraI | Relaxase |
| LNN29_RS25115 (LNN29_25065) | 29798..30130 | - | 333 | WP_001284001.1 | IncI1-type relaxosome accessory protein NikA | - |
| LNN29_RS25120 (LNN29_25070) | 30365..30700 | + | 336 | WP_024133211.1 | hypothetical protein | - |
| LNN29_RS25125 (LNN29_25075) | 32086..32922 | + | 837 | WP_002433426.1 | replication initiation protein | - |
| LNN29_RS25130 (LNN29_25080) | 32962..33278 | + | 317 | Protein_36 | hypothetical protein | - |
| LNN29_RS25135 (LNN29_25085) | 33469..33699 | - | 231 | WP_000051067.1 | plasmid partition protein ParG | - |
| LNN29_RS25140 (LNN29_25090) | 33750..34370 | - | 621 | WP_000864790.1 | ParA family protein | - |
| LNN29_RS25145 (LNN29_25095) | 34615..34945 | + | 331 | Protein_39 | recombinase family protein | - |
| LNN29_RS25150 (LNN29_25100) | 35178..36758 | + | 1581 | WP_000381478.1 | IS66 family transposase ISCro1 | Transposase |
| LNN29_RS25160 (LNN29_25110) | 37982..38254 | + | 273 | WP_022630248.1 | hypothetical protein | VF |
| LNN29_RS25165 (LNN29_25115) | 38705..39239 | + | 535 | Protein_42 | IS630 family transposase | - |
| LNN29_RS25170 (LNN29_25120) | 40373..42001 | - | 1629 | WP_158522431.1 | Methyl-accepting chemotaxis protein I | VF |
| LNN29_RS25175 (LNN29_25125) | 43095..43952 | - | 858 | WP_000137912.1 | incFII family plasmid replication initiator RepA | - |
| LNN29_RS25180 (LNN29_25130) | 43945..44019 | - | 75 | WP_071779410.1 | RepA leader peptide Tap | - |
| LNN29_RS25185 (LNN29_25135) | 44227..44484 | - | 258 | WP_024133204.1 | replication regulatory protein RepA | - |
| LNN29_RS25190 (LNN29_25140) | 44630..44981 | - | 352 | Protein_47 | IS4 family transposase | - |
| LNN29_RS25195 (LNN29_25145) | 45614..45958 | - | 345 | WP_229321797.1 | Inner membrane ABC transporter ATP-binding protein YddA | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|