MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 119765 bp
Accession: NZ_CP086606 Location: 1..119765 Organism: Escherichia fergusonii strain EF20JDJ4045 Replicon: plasmid pEF45-2
Accession: NZ_CP086606 Location: 1..119765 Organism: Escherichia fergusonii strain EF20JDJ4045 Replicon: plasmid pEF45-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN29_RS23380 (LNN29_23335) | 740..1621 | - | 882 | WP_001702265.1 | hypothetical protein | - |
| LNN29_RS23385 (LNN29_23340) | 1636..2247 | - | 612 | WP_000523978.1 | hypothetical protein | - |
| LNN29_RS23390 (LNN29_23345) | 2258..2824 | - | 567 | WP_029401369.1 | hypothetical protein | - |
| LNN29_RS23395 (LNN29_23350) | 2905..3444 | - | 540 | WP_001033469.1 | DUF5384 family protein | - |
| LNN29_RS23400 (LNN29_23355) | 3448..3981 | - | 534 | WP_089521650.1 | hypothetical protein | - |
| LNN29_RS23405 (LNN29_23360) | 4054..5262 | + | 1209 | WP_225343624.1 | IS4 family transposase IS10R | Transposase |
| LNN29_RS23410 (LNN29_23365) | 5920..6141 | + | 222 | WP_071588786.1 | host cell division inhibitor Icd-like protein | - |
| LNN29_RS23415 (LNN29_23370) | 6138..7181 | + | 1044 | WP_000743164.1 | phage antirepressor Ant | - |
| LNN29_RS23420 (LNN29_23375) | 7345..8145 | + | 801 | WP_001187876.1 | phage antirepressor KilAC domain-containing protein | - |
| LNN29_RS23425 (LNN29_23380) | 8175..9020 | + | 846 | WP_001379176.1 | helix-turn-helix domain-containing protein | - |
| LNN29_RS23430 (LNN29_23385) | 9071..9316 | + | 246 | WP_029401368.1 | hypothetical protein | - |
| LNN29_RS23435 (LNN29_23390) | 9498..9653 | + | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| LNN29_RS23440 (LNN29_23395) | 9770..10279 | - | 510 | WP_000509939.1 | hypothetical protein | - |
| LNN29_RS23445 (LNN29_23400) | 10291..10872 | - | 582 | WP_000035301.1 | hypothetical protein | - |
| LNN29_RS23450 (LNN29_23405) | 10908..11723 | - | 816 | WP_029401366.1 | hypothetical protein | - |
| LNN29_RS23455 (LNN29_23410) | 11733..13322 | - | 1590 | WP_125400777.1 | hypothetical protein | - |
| LNN29_RS23460 (LNN29_23415) | 13383..15089 | - | 1707 | WP_009446764.1 | hypothetical protein | - |
| LNN29_RS23465 (LNN29_23420) | 15307..16308 | - | 1002 | WP_098729062.1 | ParB family protein | - |
| LNN29_RS23470 (LNN29_23425) | 16325..17521 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| LNN29_RS23475 (LNN29_23430) | 17690..18499 | - | 810 | WP_001154678.1 | GIY-YIG nuclease family protein | - |
| LNN29_RS23480 (LNN29_23435) | 18792..19676 | - | 885 | WP_001113737.1 | RepB family plasmid replication initiator protein | - |
| LNN29_RS23485 (LNN29_23440) | 20011..20403 | - | 393 | WP_001281120.1 | hypothetical protein | - |
| LNN29_RS23490 (LNN29_23445) | 20415..20555 | - | 141 | WP_000336813.1 | hypothetical protein | - |
| LNN29_RS23495 (LNN29_23450) | 20581..21003 | - | 423 | WP_000007772.1 | hypothetical protein | - |
| LNN29_RS23500 (LNN29_23455) | 21043..21831 | - | 789 | WP_000890212.1 | hypothetical protein | - |
| LNN29_RS23505 (LNN29_23460) | 22294..22578 | + | 285 | WP_001177860.1 | hypothetical protein | - |
| LNN29_RS23510 (LNN29_23465) | 22571..23476 | + | 906 | WP_061355005.1 | recombination-associated protein RdgC | - |
| LNN29_RS23515 (LNN29_23470) | 23473..26760 | + | 3288 | WP_125400778.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| LNN29_RS23525 (LNN29_23480) | 28182..29009 | + | 828 | WP_000751802.1 | SPFH domain-containing protein | - |
| LNN29_RS23535 (LNN29_23490) | 29394..30758 | + | 1365 | WP_125400779.1 | replicative DNA helicase | - |
| LNN29_RS23540 (LNN29_23495) | 30758..31756 | + | 999 | WP_001198664.1 | glycosyltransferase family 1 protein | - |
| LNN29_RS23545 (LNN29_23500) | 31804..32436 | - | 633 | WP_000535206.1 | hypothetical protein | - |
| LNN29_RS23550 (LNN29_23505) | 32429..33445 | - | 1017 | WP_125400780.1 | phage tail tape measure protein | - |
| LNN29_RS23555 (LNN29_23510) | 33447..34232 | - | 786 | WP_015974270.1 | hypothetical protein | - |
| LNN29_RS23560 (LNN29_23515) | 34219..34947 | - | 729 | WP_000896801.1 | hypothetical protein | - |
| LNN29_RS23565 (LNN29_23520) | 34951..36168 | - | 1218 | WP_125400781.1 | phage tail protein | - |
| LNN29_RS23570 (LNN29_23525) | 36178..36555 | - | 378 | WP_000235786.1 | hypothetical protein | - |
| LNN29_RS23575 (LNN29_23530) | 36702..36947 | + | 246 | WP_000840930.1 | hypothetical protein | - |
| LNN29_RS23580 (LNN29_23535) | 36950..37528 | + | 579 | WP_000943609.1 | VRR-NUC domain-containing protein | - |
| LNN29_RS23585 (LNN29_23540) | 37595..37750 | + | 156 | WP_000095380.1 | hypothetical protein | - |
| LNN29_RS23590 (LNN29_23545) | 38252..38878 | + | 627 | WP_054626030.1 | hypothetical protein | - |
| LNN29_RS23595 (LNN29_23550) | 38875..39552 | + | 678 | WP_077902197.1 | metallophosphoesterase | - |
| LNN29_RS23600 (LNN29_23555) | 39549..40250 | + | 702 | WP_000684845.1 | hypothetical protein | - |
| LNN29_RS23605 (LNN29_23560) | 40552..41814 | + | 1263 | WP_104920464.1 | hypothetical protein | - |
| LNN29_RS23610 (LNN29_23565) | 41888..42187 | + | 300 | Protein_45 | hypothetical protein | - |
| LNN29_RS23615 (LNN29_23570) | 42188..42885 | - | 698 | Protein_46 | IS1-like element IS1A family transposase | - |
| LNN29_RS23620 (LNN29_23575) | 42941..43078 | + | 138 | Protein_47 | N-hydroxyarylamine O-acetyltransferase | - |
| LNN29_RS23625 (LNN29_23580) | 43174..44067 | - | 894 | WP_000804358.1 | putative isomerase YddE | VF |
| LNN29_RS23630 (LNN29_23585) | 44147..44827 | - | 681 | WP_000617115.1 | respiratory nitrate reductase subunit gamma | - |
| LNN29_RS23635 (LNN29_23590) | 44824..45519 | - | 696 | WP_001166374.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| LNN29_RS23640 (LNN29_23595) | 45519..47063 | - | 1545 | WP_000702558.1 | nitrate reductase subunit beta | - |
| LNN29_RS23645 (LNN29_23600) | 47060..50800 | - | 3741 | WP_002431872.1 | nitrate reductase Z subunit alpha | - |
| LNN29_RS23650 (LNN29_23605) | 50895..52283 | - | 1389 | WP_001207923.1 | nitrate/nitrite transporter NarU | - |
| LNN29_RS23655 (LNN29_23610) | 52546..53526 | + | 981 | WP_000019434.1 | IS5 family transposase ISKpn26 | Transposase |
| LNN29_RS23660 (LNN29_23615) | 53912..54133 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LNN29_RS23665 (LNN29_23620) | 54133..54513 | + | 381 | WP_001216044.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LNN29_RS23670 (LNN29_23625) | 54518..54697 | + | 180 | WP_039022005.1 | hypothetical protein | - |
| LNN29_RS23675 (LNN29_23630) | 54725..55768 | + | 1044 | WP_125400979.1 | DUF968 domain-containing protein | - |
| LNN29_RS23680 (LNN29_23635) | 55857..56309 | + | 453 | WP_001326849.1 | late promoter-activating protein | - |
| LNN29_RS23685 (LNN29_23640) | 56396..57589 | + | 1194 | WP_000219618.1 | hypothetical protein | - |
| LNN29_RS23690 (LNN29_23645) | 57589..59073 | + | 1485 | WP_125400980.1 | terminase | - |
| LNN29_RS23695 (LNN29_23650) | 59297..59416 | + | 120 | WP_071527722.1 | ash family protein | - |
| LNN29_RS23700 (LNN29_23655) | 59435..59656 | + | 222 | WP_001361625.1 | host cell division inhibitor Icd-like protein | - |
| LNN29_RS23705 (LNN29_23660) | 59653..60765 | + | 1113 | WP_001260616.1 | phage antirepressor Ant | - |
| LNN29_RS23710 (LNN29_23665) | 60798..61649 | - | 852 | WP_000611656.1 | phage repressor protein C1 | - |
| LNN29_RS23715 (LNN29_23670) | 61760..61969 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| LNN29_RS23720 (LNN29_23675) | 62574..62795 | + | 222 | WP_063080290.1 | hypothetical protein | - |
| LNN29_RS23725 (LNN29_23680) | 62803..63834 | + | 1032 | WP_000067536.1 | site-specific integrase | - |
| LNN29_RS23730 (LNN29_23685) | 63885..64196 | + | 312 | WP_063080289.1 | hypothetical protein | - |
| LNN29_RS23735 (LNN29_23690) | 64444..64869 | + | 426 | Protein_70 | Ref family recombination enhancement nuclease | - |
| LNN29_RS23740 (LNN29_23695) | 65017..65876 | - | 860 | Protein_71 | Beta-lactamase TEM | ARG |
| LNN29_RS23745 (LNN29_23700) | 66059..66493 | - | 435 | Protein_72 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LNN29_RS23750 (LNN29_23705) | 66548..67252 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LNN29_RS23755 (LNN29_23710) | 67316..67444 | - | 129 | Protein_74 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LNN29_RS23760 (LNN29_23715) | 67608..68879 | + | 1272 | Protein_75 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LNN29_RS23765 (LNN29_23720) | 68932..69636 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LNN29_RS23770 (LNN29_23725) | 69700..69858 | - | 159 | Protein_77 | siderophore-interacting protein | - |
| LNN29_RS23775 (LNN29_23730) | 70090..70737 | + | 648 | WP_000983434.1 | PadR family transcriptional regulator | - |
| LNN29_RS23780 (LNN29_23735) | 70734..72302 | - | 1569 | WP_125401262.1 | Methyl-accepting chemotaxis protein III | VF |
| LNN29_RS23785 (LNN29_23740) | 72468..73172 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| LNN29_RS23790 (LNN29_23745) | 73209..73544 | - | 336 | WP_229321787.1 | hypothetical protein | - |
| LNN29_RS23795 (LNN29_23750) | 73571..74107 | - | 537 | WP_229321788.1 | hypothetical protein | - |
| LNN29_RS23800 (LNN29_23755) | 74586..75290 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LNN29_RS23805 (LNN29_23760) | 75343..76098 | + | 756 | Protein_84 | IS110 family transposase IS5075 | Transposase |
| LNN29_RS23810 (LNN29_23765) | 76370..76456 | - | 87 | Protein_85 | Arm DNA-binding domain-containing protein | - |
| LNN29_RS23815 (LNN29_23770) | 76786..77601 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| LNN29_RS23820 (LNN29_23775) | 77688..77930 | + | 243 | Protein_87 | phosphoglucosamine mutase | - |
| LNN29_RS23825 (LNN29_23780) | 78166..79659 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| LNN29_RS23830 (LNN29_23785) | 79870..80094 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| LNN29_RS23835 (LNN29_23790) | 80091..80828 | - | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LNN29_RS23840 (LNN29_23795) | 81314..81454 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| LNN29_RS23845 (LNN29_23800) | 81460..82164 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LNN29_RS23850 (LNN29_23805) | 82549..83475 | + | 927 | Protein_93 | phage tail protein | - |
| LNN29_RS23855 (LNN29_23810) | 83478..84011 | + | 534 | WP_029402731.1 | tail fiber assembly protein | - |
| LNN29_RS23860 (LNN29_23815) | 84040..84567 | - | 528 | WP_029402732.1 | tail fiber assembly protein | - |
| LNN29_RS23865 (LNN29_23820) | 84571..85566 | - | 996 | Protein_96 | phage tail protein | - |
| LNN29_RS23870 (LNN29_23825) | 85983..86687 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LNN29_RS23875 (LNN29_23830) | 86755..88053 | + | 1299 | Protein_98 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LNN29_RS23880 (LNN29_23835) | 88086..88226 | + | 141 | Protein_99 | Ref family recombination enhancement nuclease | - |
| LNN29_RS23885 (LNN29_23840) | 88416..89057 | + | 642 | WP_023351534.1 | hypothetical protein | - |
| LNN29_RS23890 (LNN29_23845) | 89160..90287 | + | 1128 | WP_000526244.1 | RelA/SpoT domain-containing protein | - |
| LNN29_RS23895 (LNN29_23850) | 90324..90572 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| LNN29_RS23900 (LNN29_23855) | 90569..91009 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| LNN29_RS23905 (LNN29_23860) | 91043..97810 | - | 6768 | WP_047629450.1 | N-6 DNA methylase | - |
| LNN29_RS23910 (LNN29_23865) | 97886..99595 | + | 1710 | WP_024200402.1 | hypothetical protein | - |
| LNN29_RS23915 (LNN29_23870) | 99588..100607 | + | 1020 | WP_000132937.1 | head processing protein | - |
| LNN29_RS23920 (LNN29_23875) | 100899..101456 | - | 558 | WP_001345478.1 | lysozyme | - |
| LNN29_RS23925 (LNN29_23880) | 101626..102114 | + | 489 | WP_000068862.1 | single-stranded DNA-binding protein | - |
| LNN29_RS23930 (LNN29_23885) | 102348..103460 | - | 1113 | WP_000724558.1 | porin OmpC | - |
| LNN29_RS23935 (LNN29_23890) | 104201..104512 | - | 312 | WP_001165932.1 | hypothetical protein | - |
| LNN29_RS23940 (LNN29_23895) | 104502..107489 | - | 2988 | WP_029401679.1 | hypothetical protein | - |
| LNN29_RS23945 (LNN29_23900) | 107502..107867 | - | 366 | WP_029401678.1 | hypothetical protein | - |
| LNN29_RS23950 (LNN29_23905) | 107864..109783 | - | 1920 | WP_029401677.1 | hypothetical protein | - |
| LNN29_RS23955 (LNN29_23910) | 109785..110387 | - | 603 | WP_029401676.1 | hypothetical protein | - |
| LNN29_RS23960 (LNN29_23915) | 110374..110817 | - | 444 | WP_000580770.1 | hypothetical protein | - |
| LNN29_RS23965 (LNN29_23920) | 110814..111143 | - | 330 | WP_000887652.1 | phage holin family protein | - |
| LNN29_RS23970 (LNN29_23925) | 111211..111492 | - | 282 | WP_000332810.1 | phage holin family protein | - |
| LNN29_RS23975 (LNN29_23930) | 111620..112180 | + | 561 | WP_029401675.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| LNN29_RS23980 (LNN29_23935) | 112183..112455 | + | 273 | Protein_119 | phage tail protein | - |
| LNN29_RS23985 (LNN29_23940) | 112502..113206 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LNN29_RS23990 (LNN29_23945) | 113261..113884 | - | 624 | Protein_121 | phage tail protein | - |
| LNN29_RS23995 (LNN29_23950) | 113896..114330 | - | 435 | WP_029402546.1 | hypothetical protein | - |
| LNN29_RS24000 (LNN29_23955) | 114409..115245 | - | 837 | WP_029402547.1 | hypothetical protein | - |
| LNN29_RS24005 (LNN29_23960) | 115245..116678 | - | 1434 | WP_125400776.1 | bleomycin hydrolase | - |
| LNN29_RS24010 (LNN29_23965) | 116675..117031 | - | 357 | WP_000002800.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|