MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 34058 bp
Accession: NZ_CP086541 Location: 1..34058 Organism: Escherichia coli strain Ec-042-T5-MAC Replicon: plasmid pEc-042-T5-MAC_3
Accession: NZ_CP086541 Location: 1..34058 Organism: Escherichia coli strain Ec-042-T5-MAC Replicon: plasmid pEc-042-T5-MAC_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN52_RS23245 (LNN52_23240) | 480..995 | + | 516 | WP_001025396.1 | J domain-containing protein | - |
| LNN52_RS23250 (LNN52_23245) | 1100..1642 | + | 543 | WP_001083908.1 | hypothetical protein | - |
| LNN52_RS23255 (LNN52_23250) | 1639..1890 | + | 252 | WP_001230708.1 | hypothetical protein | Toxin Detail |
| LNN52_RS23260 (LNN52_23255) | 1877..2104 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| LNN52_RS23265 (LNN52_23260) | 2496..2795 | + | 300 | WP_000650313.1 | hypothetical protein | - |
| LNN52_RS23270 (LNN52_23265) | 2887..3252 | + | 366 | WP_000854262.1 | hypothetical protein | - |
| LNN52_RS23275 (LNN52_23270) | 3527..3700 | + | 174 | WP_071821486.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LNN52_RS23280 (LNN52_23275) | 4063..4566 | + | 504 | WP_000781818.1 | DNA distortion polypeptide 1 | - |
| LNN52_RS23285 (LNN52_23280) | 4570..5799 | + | 1230 | WP_058815700.1 | hypothetical protein | Relaxase |
| LNN52_RS23290 (LNN52_23285) | 5876..6169 | + | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| LNN52_RS23295 (LNN52_23290) | 6166..6381 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| LNN52_RS23300 (LNN52_23295) | 6558..6734 | + | 177 | WP_000660496.1 | hypothetical protein | - |
| LNN52_RS23305 (LNN52_23300) | 6737..7357 | + | 621 | WP_001299949.1 | Type IV secretion system protein virB1 | VF |
| LNN52_RS23310 (LNN52_23305) | 7371..7697 | + | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| LNN52_RS23315 (LNN52_23310) | 7716..10463 | + | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| LNN52_RS23320 (LNN52_23315) | 10475..11191 | + | 717 | WP_000832280.1 | type IV secretion system protein | - |
| LNN52_RS23325 (LNN52_23320) | 11203..12297 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| LNN52_RS23330 (LNN52_23325) | 12812..13498 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| LNN52_RS23335 (LNN52_23330) | 13495..14403 | + | 909 | WP_001299943.1 | Type IV secretion system protein virB9 | VF |
| LNN52_RS23340 (LNN52_23335) | 14396..15514 | + | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| LNN52_RS23345 (LNN52_23340) | 15516..16544 | + | 1029 | WP_000017224.1 | Type IV secretion system protein VirB11 | VF |
| LNN52_RS23350 (LNN52_23345) | 16531..18393 | + | 1863 | WP_000847103.1 | relaxosome-coupling protein TaxB | - |
| LNN52_RS23355 (LNN52_23350) | 18402..18824 | + | 423 | WP_001328552.1 | cag pathogenicity island Cag12 family protein | - |
| LNN52_RS23360 (LNN52_23355) | 18808..19113 | + | 306 | WP_000147045.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LNN52_RS23365 (LNN52_23360) | 19214..19648 | + | 435 | WP_242881453.1 | hypothetical protein | - |
| LNN52_RS23370 (LNN52_23365) | 19740..20048 | + | 309 | WP_000647577.1 | hypothetical protein | - |
| LNN52_RS23375 (LNN52_23370) | 20045..20539 | + | 495 | WP_001215681.1 | thermonuclease family protein | - |
| LNN52_RS23380 (LNN52_23375) | 20621..21883 | + | 1263 | WP_000517489.1 | AAA family ATPase | - |
| LNN52_RS23385 (LNN52_23380) | 21887..22459 | + | 573 | WP_001199073.1 | hypothetical protein | - |
| LNN52_RS23390 (LNN52_23385) | 22464..24617 | + | 2154 | WP_001235747.1 | type IA DNA topoisomerase | - |
| LNN52_RS23395 (LNN52_23390) | 24614..24820 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| LNN52_RS23400 (LNN52_23395) | 24836..25300 | + | 465 | WP_001293133.1 | H-NS family nucleoid-associated regulatory protein | - |
| LNN52_RS23405 (LNN52_23400) | 25404..26060 | + | 657 | WP_000972911.1 | hypothetical protein | - |
| LNN52_RS23410 (LNN52_23405) | 26143..26532 | + | 390 | WP_223196981.1 | hypothetical protein | - |
| LNN52_RS23415 (LNN52_23410) | 26617..27441 | + | 825 | WP_016238959.1 | Tyrosine recombinase XerD | VF |
| LNN52_RS23420 (LNN52_23415) | 27546..28205 | + | 660 | WP_000516230.1 | hypothetical protein | VF |
| LNN52_RS23425 (LNN52_23420) | 28371..28673 | + | 303 | WP_001062964.1 | hypothetical protein | - |
| LNN52_RS23430 (LNN52_23425) | 28710..28961 | + | 252 | WP_000905709.1 | hypothetical protein | - |
| LNN52_RS23435 (LNN52_23430) | 29533..30060 | - | 528 | WP_000577047.1 | DUF2726 domain-containing protein | - |
| LNN52_RS23440 (LNN52_23435) | 30196..30600 | - | 405 | WP_000654313.1 | hypothetical protein | - |
| LNN52_RS23445 (LNN52_23440) | 30666..31673 | - | 1008 | WP_000243324.1 | replication initiation protein | - |
| LNN52_RS23450 (LNN52_23445) | 33217..33552 | + | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LNN52_RS23455 (LNN52_23450) | 33549..33899 | + | 351 | WP_000127483.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|