MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 34058 bp
Accession: NZ_CP086529 Location: 1..34058 Organism: Escherichia coli strain Ec-042-T20-MAC Replicon: plasmid pEc-042-T20-MAC_3
Accession: NZ_CP086529 Location: 1..34058 Organism: Escherichia coli strain Ec-042-T20-MAC Replicon: plasmid pEc-042-T20-MAC_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN58_RS23245 (LNN58_23240) | 118..423 | - | 306 | WP_000147045.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LNN58_RS23250 (LNN58_23245) | 407..829 | - | 423 | WP_001328552.1 | cag pathogenicity island Cag12 family protein | - |
| LNN58_RS23255 (LNN58_23250) | 838..2700 | - | 1863 | WP_000847103.1 | relaxosome-coupling protein TaxB | - |
| LNN58_RS23260 (LNN58_23255) | 2687..3715 | - | 1029 | WP_000017224.1 | P-type DNA transfer ATPase VirB11 | - |
| LNN58_RS23265 (LNN58_23260) | 3717..4835 | - | 1119 | WP_000131271.1 | VirB10/TraB/TrbI family type IV secretion system protein | - |
| LNN58_RS23270 (LNN58_23265) | 4828..5736 | - | 909 | WP_001299943.1 | P-type conjugative transfer protein VirB9 | - |
| LNN58_RS23275 (LNN58_23270) | 5733..6419 | - | 687 | WP_001290765.1 | type IV secretion system protein | - |
| LNN58_RS23280 (LNN58_23275) | 6934..8028 | - | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| LNN58_RS23285 (LNN58_23280) | 8040..8756 | - | 717 | WP_000832280.1 | type IV secretion system protein | - |
| LNN58_RS23290 (LNN58_23285) | 8768..11515 | - | 2748 | WP_000105985.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| LNN58_RS23295 (LNN58_23290) | 11534..11860 | - | 327 | WP_000008647.1 | TrbC/VirB2 family protein | - |
| LNN58_RS23300 (LNN58_23295) | 11874..12494 | - | 621 | WP_001299949.1 | lytic transglycosylase domain-containing protein | - |
| LNN58_RS23305 (LNN58_23300) | 12497..12673 | - | 177 | WP_000660496.1 | hypothetical protein | - |
| LNN58_RS23310 (LNN58_23305) | 12850..13065 | - | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| LNN58_RS23315 (LNN58_23310) | 13062..13355 | - | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| LNN58_RS23320 (LNN58_23315) | 13432..14661 | - | 1230 | WP_058815700.1 | DNA relaxase/nickase TaxC | - |
| LNN58_RS23325 (LNN58_23320) | 14665..15168 | - | 504 | WP_000781818.1 | DNA distortion polypeptide 1 | - |
| LNN58_RS23330 (LNN58_23325) | 15531..15704 | - | 174 | WP_071821486.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LNN58_RS23335 (LNN58_23330) | 15979..16344 | - | 366 | WP_000854262.1 | hypothetical protein | - |
| LNN58_RS23340 (LNN58_23335) | 16436..16735 | - | 300 | WP_000650313.1 | hypothetical protein | - |
| LNN58_RS23345 (LNN58_23340) | 17127..17354 | - | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| LNN58_RS23350 (LNN58_23345) | 17341..17592 | - | 252 | WP_001230708.1 | hypothetical protein | Toxin Detail |
| LNN58_RS23355 (LNN58_23350) | 17589..18131 | - | 543 | WP_001083908.1 | hypothetical protein | - |
| LNN58_RS23360 (LNN58_23355) | 18236..18751 | - | 516 | WP_001025396.1 | J domain-containing protein | - |
| LNN58_RS23365 (LNN58_23360) | 19390..19740 | - | 351 | WP_000127483.1 | hypothetical protein | - |
| LNN58_RS23370 (LNN58_23365) | 19737..20072 | - | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LNN58_RS23375 (LNN58_23370) | 21616..22623 | + | 1008 | WP_000243324.1 | replication initiation protein | - |
| LNN58_RS23380 (LNN58_23375) | 22689..23093 | + | 405 | WP_000654313.1 | hypothetical protein | - |
| LNN58_RS23385 (LNN58_23380) | 23229..23756 | + | 528 | WP_000577047.1 | DUF2726 domain-containing protein | - |
| LNN58_RS23390 (LNN58_23385) | 24328..24579 | - | 252 | WP_000905709.1 | hypothetical protein | - |
| LNN58_RS23395 (LNN58_23390) | 24616..24918 | - | 303 | WP_001062964.1 | hypothetical protein | - |
| LNN58_RS23400 (LNN58_23395) | 25084..25743 | - | 660 | WP_000516230.1 | division plane positioning ATPase MipZ | - |
| LNN58_RS23405 (LNN58_23400) | 25848..26672 | - | 825 | WP_016238959.1 | tyrosine-type recombinase/integrase | - |
| LNN58_RS23410 (LNN58_23405) | 26757..27146 | - | 390 | WP_223196981.1 | hypothetical protein | - |
| LNN58_RS23415 (LNN58_23410) | 27229..27885 | - | 657 | WP_000972911.1 | hypothetical protein | - |
| LNN58_RS23420 (LNN58_23415) | 27989..28453 | - | 465 | WP_001293133.1 | H-NS family nucleoid-associated regulatory protein | - |
| LNN58_RS23425 (LNN58_23420) | 28469..28675 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| LNN58_RS23430 (LNN58_23425) | 28672..30825 | - | 2154 | WP_001235747.1 | type IA DNA topoisomerase | - |
| LNN58_RS23435 (LNN58_23430) | 30830..31402 | - | 573 | WP_001199073.1 | hypothetical protein | - |
| LNN58_RS23440 (LNN58_23435) | 31406..32668 | - | 1263 | WP_000517489.1 | AAA family ATPase | - |
| LNN58_RS23445 (LNN58_23440) | 32750..33244 | - | 495 | WP_001215681.1 | thermonuclease family protein | - |
| LNN58_RS23450 (LNN58_23445) | 33241..33549 | - | 309 | WP_000647577.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|