MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 34058 bp
Accession: NZ_CP086523 Location: 1..34058 Organism: Escherichia coli strain Ec-042-T20-ESBL Replicon: plasmid pEc-042-T20-ESBL_3
Accession: NZ_CP086523 Location: 1..34058 Organism: Escherichia coli strain Ec-042-T20-ESBL Replicon: plasmid pEc-042-T20-ESBL_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN45_RS23220 (LNN45_23215) | 374..1090 | - | 717 | WP_000832280.1 | type IV secretion system protein | - |
| LNN45_RS23225 (LNN45_23220) | 1102..3849 | - | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| LNN45_RS23230 (LNN45_23225) | 3868..4194 | - | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| LNN45_RS23235 (LNN45_23230) | 4208..4828 | - | 621 | WP_001299949.1 | Type IV secretion system protein virB1 | VF |
| LNN45_RS23240 (LNN45_23235) | 4831..5007 | - | 177 | WP_000660496.1 | hypothetical protein | - |
| LNN45_RS23245 (LNN45_23240) | 5184..5399 | - | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| LNN45_RS23250 (LNN45_23245) | 5396..5689 | - | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| LNN45_RS23255 (LNN45_23250) | 5766..6995 | - | 1230 | WP_058815700.1 | hypothetical protein | Relaxase |
| LNN45_RS23260 (LNN45_23255) | 6999..7502 | - | 504 | WP_000781818.1 | DNA distortion polypeptide 1 | - |
| LNN45_RS23265 (LNN45_23260) | 7865..8038 | - | 174 | WP_071821486.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LNN45_RS23270 (LNN45_23265) | 8313..8678 | - | 366 | WP_000854262.1 | hypothetical protein | - |
| LNN45_RS23275 (LNN45_23270) | 8770..9069 | - | 300 | WP_000650313.1 | hypothetical protein | - |
| LNN45_RS23280 (LNN45_23275) | 9461..9688 | - | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| LNN45_RS23285 (LNN45_23280) | 9675..9926 | - | 252 | WP_001230708.1 | hypothetical protein | Toxin Detail |
| LNN45_RS23290 (LNN45_23285) | 9923..10465 | - | 543 | WP_001083908.1 | hypothetical protein | - |
| LNN45_RS23295 (LNN45_23290) | 10570..11085 | - | 516 | WP_001025396.1 | J domain-containing protein | - |
| LNN45_RS23300 (LNN45_23295) | 11724..12074 | - | 351 | WP_000127483.1 | hypothetical protein | - |
| LNN45_RS23305 (LNN45_23300) | 12071..12406 | - | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LNN45_RS23310 (LNN45_23305) | 13950..14957 | + | 1008 | WP_000243324.1 | replication initiation protein | - |
| LNN45_RS23315 (LNN45_23310) | 15023..15427 | + | 405 | WP_000654313.1 | hypothetical protein | - |
| LNN45_RS23320 (LNN45_23315) | 15563..16090 | + | 528 | WP_000577047.1 | DUF2726 domain-containing protein | - |
| LNN45_RS23325 (LNN45_23320) | 16662..16913 | - | 252 | WP_000905709.1 | hypothetical protein | - |
| LNN45_RS23330 (LNN45_23325) | 16950..17252 | - | 303 | WP_001062964.1 | hypothetical protein | - |
| LNN45_RS23335 (LNN45_23330) | 17418..18077 | - | 660 | WP_000516230.1 | hypothetical protein | VF |
| LNN45_RS23340 (LNN45_23335) | 18182..19006 | - | 825 | WP_016238959.1 | Tyrosine recombinase XerD | VF |
| LNN45_RS23345 (LNN45_23340) | 19091..19480 | - | 390 | WP_223196981.1 | hypothetical protein | - |
| LNN45_RS23350 (LNN45_23345) | 19563..20219 | - | 657 | WP_000972911.1 | hypothetical protein | - |
| LNN45_RS23355 (LNN45_23350) | 20323..20787 | - | 465 | WP_001293133.1 | H-NS family nucleoid-associated regulatory protein | - |
| LNN45_RS23360 (LNN45_23355) | 20803..21009 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| LNN45_RS23365 (LNN45_23360) | 21006..23159 | - | 2154 | WP_001235747.1 | type IA DNA topoisomerase | - |
| LNN45_RS23370 (LNN45_23365) | 23164..23736 | - | 573 | WP_001199073.1 | hypothetical protein | - |
| LNN45_RS23375 (LNN45_23370) | 23740..25002 | - | 1263 | WP_000517489.1 | AAA family ATPase | - |
| LNN45_RS23380 (LNN45_23375) | 25084..25578 | - | 495 | WP_001215681.1 | thermonuclease family protein | - |
| LNN45_RS23385 (LNN45_23380) | 25575..25883 | - | 309 | WP_000647577.1 | hypothetical protein | - |
| LNN45_RS23390 (LNN45_23385) | 25975..26409 | - | 435 | WP_242881453.1 | hypothetical protein | - |
| LNN45_RS23395 (LNN45_23390) | 26510..26815 | - | 306 | WP_000147045.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LNN45_RS23400 (LNN45_23395) | 26799..27221 | - | 423 | WP_001328552.1 | cag pathogenicity island Cag12 family protein | - |
| LNN45_RS23405 (LNN45_23400) | 27230..29092 | - | 1863 | WP_000847103.1 | relaxosome-coupling protein TaxB | - |
| LNN45_RS23410 (LNN45_23405) | 29079..30107 | - | 1029 | WP_000017224.1 | Type IV secretion system protein VirB11 | VF |
| LNN45_RS23415 (LNN45_23410) | 30109..31227 | - | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| LNN45_RS23420 (LNN45_23415) | 31220..32128 | - | 909 | WP_001299943.1 | Type IV secretion system protein virB9 | VF |
| LNN45_RS23425 (LNN45_23420) | 32125..32811 | - | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|