MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33826 bp
Accession: NZ_CP086516 Location: 1..33826 Organism: Escherichia coli strain Ec-050-T0 Replicon: plasmid pEc-050-T0_6
Accession: NZ_CP086516 Location: 1..33826 Organism: Escherichia coli strain Ec-050-T0 Replicon: plasmid pEc-050-T0_6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN50_RS25905 (LNN50_25910) | 1221..1793 | + | 573 | WP_001199073.1 | hypothetical protein | - |
| LNN50_RS25910 (LNN50_25915) | 1798..3951 | + | 2154 | WP_001235747.1 | type IA DNA topoisomerase | - |
| LNN50_RS25915 (LNN50_25920) | 3948..4154 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| LNN50_RS25920 (LNN50_25925) | 4170..4634 | + | 465 | WP_001293133.1 | H-NS family nucleoid-associated regulatory protein | - |
| LNN50_RS25925 (LNN50_25930) | 4738..5394 | + | 657 | WP_000972911.1 | hypothetical protein | - |
| LNN50_RS25930 (LNN50_25935) | 5477..5866 | + | 390 | WP_236115859.1 | hypothetical protein | - |
| LNN50_RS25935 (LNN50_25940) | 5951..6775 | + | 825 | WP_016238959.1 | Tyrosine recombinase XerD | VF |
| LNN50_RS25940 (LNN50_25945) | 6880..7539 | + | 660 | WP_000516230.1 | hypothetical protein | VF |
| LNN50_RS25945 (LNN50_25950) | 7705..8007 | + | 303 | WP_001062964.1 | hypothetical protein | - |
| LNN50_RS25950 (LNN50_25955) | 8044..8295 | + | 252 | WP_000905709.1 | hypothetical protein | - |
| LNN50_RS25955 (LNN50_25960) | 8867..9394 | - | 528 | WP_000577047.1 | DUF2726 domain-containing protein | - |
| LNN50_RS25960 (LNN50_25965) | 9530..9934 | - | 405 | WP_000654313.1 | hypothetical protein | - |
| LNN50_RS25965 (LNN50_25970) | 10000..11007 | - | 1008 | WP_000243324.1 | replication initiation protein | - |
| LNN50_RS25970 (LNN50_25975) | 12551..12886 | + | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LNN50_RS25975 (LNN50_25980) | 12883..13233 | + | 351 | WP_000127483.1 | hypothetical protein | - |
| LNN50_RS25980 (LNN50_25985) | 13872..14387 | + | 516 | WP_001025396.1 | J domain-containing protein | - |
| LNN50_RS25985 (LNN50_25990) | 14492..15034 | + | 543 | WP_001083908.1 | hypothetical protein | - |
| LNN50_RS25990 (LNN50_25995) | 15031..15282 | + | 252 | WP_001230708.1 | hypothetical protein | Toxin Detail |
| LNN50_RS25995 (LNN50_26000) | 15269..15496 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| LNN50_RS26000 (LNN50_26005) | 15888..16187 | + | 300 | WP_000650313.1 | hypothetical protein | - |
| LNN50_RS26005 (LNN50_26010) | 16279..16644 | + | 366 | WP_000854262.1 | hypothetical protein | - |
| LNN50_RS26010 (LNN50_26015) | 16919..17092 | + | 174 | WP_071821486.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LNN50_RS26015 (LNN50_26020) | 17455..17958 | + | 504 | WP_000781818.1 | DNA distortion polypeptide 1 | - |
| LNN50_RS26020 (LNN50_26025) | 17962..19191 | + | 1230 | WP_000539545.1 | hypothetical protein | Relaxase |
| LNN50_RS26025 (LNN50_26030) | 19268..19561 | + | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| LNN50_RS26030 (LNN50_26035) | 19558..19773 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| LNN50_RS26035 (LNN50_26040) | 19950..20126 | + | 177 | WP_000660496.1 | hypothetical protein | - |
| LNN50_RS26040 (LNN50_26045) | 20129..20749 | + | 621 | WP_111530677.1 | Type IV secretion system protein virB1 | VF |
| LNN50_RS26045 (LNN50_26050) | 20763..21089 | + | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| LNN50_RS26050 (LNN50_26055) | 21108..23855 | + | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| LNN50_RS26055 (LNN50_26060) | 23867..24583 | + | 717 | WP_242879861.1 | type IV secretion system protein | - |
| LNN50_RS26060 (LNN50_26065) | 24595..25689 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| LNN50_RS26065 (LNN50_26070) | 26204..26890 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| LNN50_RS26070 (LNN50_26075) | 26887..27795 | + | 909 | WP_001299943.1 | Type IV secretion system protein virB9 | VF |
| LNN50_RS26075 (LNN50_26080) | 27788..28906 | + | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| LNN50_RS26080 (LNN50_26085) | 28908..29936 | + | 1029 | WP_000017224.1 | Type IV secretion system protein VirB11 | VF |
| LNN50_RS26085 (LNN50_26090) | 29923..31785 | + | 1863 | WP_000847103.1 | relaxosome-coupling protein TaxB | - |
| LNN50_RS26090 (LNN50_26095) | 31794..32216 | + | 423 | WP_001328552.1 | cag pathogenicity island Cag12 family protein | - |
| LNN50_RS26095 (LNN50_26100) | 32200..32505 | + | 306 | WP_000147045.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LNN50_RS26100 (LNN50_26105) | 32560..32808 | + | 249 | WP_001290044.1 | hypothetical protein | - |
| LNN50_RS26105 (LNN50_26110) | 32900..33208 | + | 309 | WP_000647577.1 | hypothetical protein | - |
| LNN50_RS26110 (LNN50_26115) | 33205..33699 | + | 495 | WP_001215681.1 | thermonuclease family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|