MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33826 bp
Accession: NZ_CP086506 Location: 1..33826 Organism: Escherichia coli strain Ec-050-T5-MAC Replicon: plasmid pEc-050-T5-MAC_6
Accession: NZ_CP086506 Location: 1..33826 Organism: Escherichia coli strain Ec-050-T5-MAC Replicon: plasmid pEc-050-T5-MAC_6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN49_RS25925 (LNN49_25930) | 199..2061 | + | 1863 | WP_000847103.1 | relaxosome-coupling protein TaxB | - |
| LNN49_RS25930 (LNN49_25935) | 2070..2492 | + | 423 | WP_001328552.1 | cag pathogenicity island Cag12 family protein | - |
| LNN49_RS25935 (LNN49_25940) | 2476..2781 | + | 306 | WP_000147045.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LNN49_RS25940 (LNN49_25945) | 2836..3084 | + | 249 | WP_001290044.1 | hypothetical protein | - |
| LNN49_RS25945 (LNN49_25950) | 3176..3484 | + | 309 | WP_000647577.1 | hypothetical protein | - |
| LNN49_RS25950 (LNN49_25955) | 3481..3975 | + | 495 | WP_001215681.1 | thermonuclease family protein | - |
| LNN49_RS25955 (LNN49_25960) | 4057..5319 | + | 1263 | WP_000517489.1 | AAA family ATPase | - |
| LNN49_RS25960 (LNN49_25965) | 5323..5895 | + | 573 | WP_001199073.1 | hypothetical protein | - |
| LNN49_RS25965 (LNN49_25970) | 5900..8053 | + | 2154 | WP_001235747.1 | type IA DNA topoisomerase | - |
| LNN49_RS25970 (LNN49_25975) | 8050..8256 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| LNN49_RS25975 (LNN49_25980) | 8272..8736 | + | 465 | WP_001293133.1 | H-NS family nucleoid-associated regulatory protein | - |
| LNN49_RS25980 (LNN49_25985) | 8840..9496 | + | 657 | WP_000972911.1 | hypothetical protein | - |
| LNN49_RS25985 (LNN49_25990) | 9579..9968 | + | 390 | WP_236115859.1 | hypothetical protein | - |
| LNN49_RS25990 (LNN49_25995) | 10053..10877 | + | 825 | WP_016238959.1 | Tyrosine recombinase XerD | VF |
| LNN49_RS25995 (LNN49_26000) | 10982..11641 | + | 660 | WP_000516230.1 | hypothetical protein | VF |
| LNN49_RS26000 (LNN49_26005) | 11807..12109 | + | 303 | WP_001062964.1 | hypothetical protein | - |
| LNN49_RS26005 (LNN49_26010) | 12146..12397 | + | 252 | WP_000905709.1 | hypothetical protein | - |
| LNN49_RS26010 (LNN49_26015) | 12969..13496 | - | 528 | WP_000577047.1 | DUF2726 domain-containing protein | - |
| LNN49_RS26015 (LNN49_26020) | 13632..14036 | - | 405 | WP_000654313.1 | hypothetical protein | - |
| LNN49_RS26020 (LNN49_26025) | 14102..15109 | - | 1008 | WP_000243324.1 | replication initiation protein | - |
| LNN49_RS26025 (LNN49_26030) | 16653..16988 | + | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LNN49_RS26030 (LNN49_26035) | 16985..17335 | + | 351 | WP_000127483.1 | hypothetical protein | - |
| LNN49_RS26035 (LNN49_26040) | 17974..18489 | + | 516 | WP_001025396.1 | J domain-containing protein | - |
| LNN49_RS26040 (LNN49_26045) | 18594..19136 | + | 543 | WP_001083908.1 | hypothetical protein | - |
| LNN49_RS26045 (LNN49_26050) | 19133..19384 | + | 252 | WP_001230708.1 | hypothetical protein | Toxin Detail |
| LNN49_RS26050 (LNN49_26055) | 19371..19598 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| LNN49_RS26055 (LNN49_26060) | 19990..20289 | + | 300 | WP_000650313.1 | hypothetical protein | - |
| LNN49_RS26060 (LNN49_26065) | 20381..20746 | + | 366 | WP_000854262.1 | hypothetical protein | - |
| LNN49_RS26065 (LNN49_26070) | 21021..21194 | + | 174 | WP_071821486.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LNN49_RS26070 (LNN49_26075) | 21557..22060 | + | 504 | WP_000781818.1 | DNA distortion polypeptide 1 | - |
| LNN49_RS26075 (LNN49_26080) | 22064..23293 | + | 1230 | WP_000539545.1 | hypothetical protein | Relaxase |
| LNN49_RS26080 (LNN49_26085) | 23370..23663 | + | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| LNN49_RS26085 (LNN49_26090) | 23660..23875 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| LNN49_RS26090 (LNN49_26095) | 24052..24228 | + | 177 | WP_000660496.1 | hypothetical protein | - |
| LNN49_RS26095 (LNN49_26100) | 24231..24851 | + | 621 | WP_111530677.1 | Type IV secretion system protein virB1 | VF |
| LNN49_RS26100 (LNN49_26105) | 24865..25191 | + | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| LNN49_RS26105 (LNN49_26110) | 25210..27957 | + | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| LNN49_RS26110 (LNN49_26115) | 27969..28685 | + | 717 | WP_000832280.1 | type IV secretion system protein | - |
| LNN49_RS26115 (LNN49_26120) | 28697..29791 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| LNN49_RS26120 (LNN49_26125) | 30306..30992 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| LNN49_RS26125 (LNN49_26130) | 30989..31897 | + | 909 | WP_001299943.1 | Type IV secretion system protein virB9 | VF |
| LNN49_RS26130 (LNN49_26135) | 31890..33008 | + | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|