MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33826 bp
Accession: NZ_CP086486 Location: 1..33826 Organism: Escherichia coli strain Ec-050-T20-MAC Replicon: plasmid pEc-050-T20-MAC_6
Accession: NZ_CP086486 Location: 1..33826 Organism: Escherichia coli strain Ec-050-T20-MAC Replicon: plasmid pEc-050-T20-MAC_6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN46_RS25920 (LNN46_25925) | 134..310 | + | 177 | WP_000660496.1 | hypothetical protein | - |
| LNN46_RS25925 (LNN46_25930) | 313..933 | + | 621 | WP_111530677.1 | lytic transglycosylase domain-containing protein | - |
| LNN46_RS25930 (LNN46_25935) | 947..1273 | + | 327 | WP_000008647.1 | TrbC/VirB2 family protein | - |
| LNN46_RS25935 (LNN46_25940) | 1292..4039 | + | 2748 | WP_000105985.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| LNN46_RS25940 (LNN46_25945) | 4051..4767 | + | 717 | WP_242879861.1 | type IV secretion system protein | - |
| LNN46_RS25945 (LNN46_25950) | 4779..5873 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| LNN46_RS25950 (LNN46_25955) | 6388..7074 | + | 687 | WP_001290765.1 | type IV secretion system protein | - |
| LNN46_RS25955 (LNN46_25960) | 7071..7979 | + | 909 | WP_001299943.1 | P-type conjugative transfer protein VirB9 | - |
| LNN46_RS25960 (LNN46_25965) | 7972..9090 | + | 1119 | WP_000131271.1 | VirB10/TraB/TrbI family type IV secretion system protein | - |
| LNN46_RS25965 (LNN46_25970) | 9092..10120 | + | 1029 | WP_000017224.1 | P-type DNA transfer ATPase VirB11 | - |
| LNN46_RS25970 (LNN46_25975) | 10107..11969 | + | 1863 | WP_000847103.1 | relaxosome-coupling protein TaxB | - |
| LNN46_RS25975 (LNN46_25980) | 11978..12400 | + | 423 | WP_001328552.1 | cag pathogenicity island Cag12 family protein | - |
| LNN46_RS25980 (LNN46_25985) | 12384..12689 | + | 306 | WP_000147045.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LNN46_RS25985 (LNN46_25990) | 12744..12992 | + | 249 | WP_001290044.1 | hypothetical protein | - |
| LNN46_RS25990 (LNN46_25995) | 13084..13392 | + | 309 | WP_000647577.1 | hypothetical protein | - |
| LNN46_RS25995 (LNN46_26000) | 13389..13883 | + | 495 | WP_001215681.1 | thermonuclease family protein | - |
| LNN46_RS26000 (LNN46_26005) | 13965..15227 | + | 1263 | WP_000517489.1 | AAA family ATPase | - |
| LNN46_RS26005 (LNN46_26010) | 15231..15803 | + | 573 | WP_001199073.1 | hypothetical protein | - |
| LNN46_RS26010 (LNN46_26015) | 15808..17961 | + | 2154 | WP_001235747.1 | type IA DNA topoisomerase | - |
| LNN46_RS26015 (LNN46_26020) | 17958..18164 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| LNN46_RS26020 (LNN46_26025) | 18180..18644 | + | 465 | WP_001293133.1 | H-NS family nucleoid-associated regulatory protein | - |
| LNN46_RS26025 (LNN46_26030) | 18748..19404 | + | 657 | WP_000972911.1 | hypothetical protein | - |
| LNN46_RS26030 (LNN46_26035) | 19487..19876 | + | 390 | WP_236115859.1 | hypothetical protein | - |
| LNN46_RS26035 (LNN46_26040) | 19961..20785 | + | 825 | WP_016238959.1 | tyrosine-type recombinase/integrase | - |
| LNN46_RS26040 (LNN46_26045) | 20890..21549 | + | 660 | WP_000516230.1 | division plane positioning ATPase MipZ | - |
| LNN46_RS26045 (LNN46_26050) | 21715..22017 | + | 303 | WP_001062964.1 | hypothetical protein | - |
| LNN46_RS26050 (LNN46_26055) | 22054..22305 | + | 252 | WP_000905709.1 | hypothetical protein | - |
| LNN46_RS26055 (LNN46_26060) | 22877..23404 | - | 528 | WP_000577047.1 | DUF2726 domain-containing protein | - |
| LNN46_RS26060 (LNN46_26065) | 23540..23944 | - | 405 | WP_000654313.1 | hypothetical protein | - |
| LNN46_RS26065 (LNN46_26070) | 24010..25017 | - | 1008 | WP_000243324.1 | replication initiation protein | - |
| LNN46_RS26070 (LNN46_26075) | 26561..26896 | + | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LNN46_RS26075 (LNN46_26080) | 26893..27243 | + | 351 | WP_000127483.1 | hypothetical protein | - |
| LNN46_RS26080 (LNN46_26085) | 27882..28397 | + | 516 | WP_001025396.1 | J domain-containing protein | - |
| LNN46_RS26085 (LNN46_26090) | 28502..29044 | + | 543 | WP_001083908.1 | hypothetical protein | - |
| LNN46_RS26090 (LNN46_26095) | 29041..29292 | + | 252 | WP_001230708.1 | hypothetical protein | Toxin Detail |
| LNN46_RS26095 (LNN46_26100) | 29279..29506 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| LNN46_RS26100 (LNN46_26105) | 29898..30197 | + | 300 | WP_000650313.1 | hypothetical protein | - |
| LNN46_RS26105 (LNN46_26110) | 30289..30654 | + | 366 | WP_000854262.1 | hypothetical protein | - |
| LNN46_RS26110 (LNN46_26115) | 30929..31102 | + | 174 | WP_071821486.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LNN46_RS26115 (LNN46_26120) | 31465..31968 | + | 504 | WP_000781818.1 | DNA distortion polypeptide 1 | - |
| LNN46_RS26120 (LNN46_26125) | 31972..33201 | + | 1230 | WP_000539545.1 | DNA relaxase/nickase TaxC | - |
| LNN46_RS26125 (LNN46_26130) | 33278..33571 | + | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| LNN46_RS26130 (LNN46_26135) | 33568..33783 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|