MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 89996 bp
Accession: NZ_CP086483 Location: 1..89996 Organism: Escherichia coli strain Ec-050-T20-MAC Replicon: plasmid pEc-050-T20-MAC_3
Accession: NZ_CP086483 Location: 1..89996 Organism: Escherichia coli strain Ec-050-T20-MAC Replicon: plasmid pEc-050-T20-MAC_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN46_RS24535 (LNN46_24540) | 346..1101 | + | 756 | WP_001077897.1 | RepB family plasmid replication initiator protein | - |
| LNN46_RS24540 (LNN46_24545) | 1483..2190 | - | 708 | WP_000021878.1 | hypothetical protein | - |
| LNN46_RS24545 (LNN46_24550) | 2206..2757 | - | 552 | WP_032220996.1 | hypothetical protein | - |
| LNN46_RS24550 (LNN46_24555) | 2810..3301 | - | 492 | WP_032220995.1 | hypothetical protein | - |
| LNN46_RS24555 (LNN46_24560) | 3310..3858 | - | 549 | WP_000870304.1 | hypothetical protein | - |
| LNN46_RS24560 (LNN46_24565) | 3950..4684 | - | 735 | WP_000801019.1 | hypothetical protein | - |
| LNN46_RS24565 (LNN46_24570) | 4728..6386 | - | 1659 | WP_001033849.1 | tail sheath protein | - |
| LNN46_RS24570 (LNN46_24575) | 6454..6732 | - | 279 | WP_024259817.1 | Ig-like domain-containing protein | - |
| LNN46_RS24575 (LNN46_24580) | 6879..8576 | - | 1698 | WP_137441744.1 | capsid protein | - |
| LNN46_RS24580 (LNN46_24585) | 8735..9127 | + | 393 | WP_224173540.1 | hypothetical protein | - |
| LNN46_RS24585 (LNN46_24590) | 9144..9602 | + | 459 | WP_000020026.1 | hypothetical protein | - |
| LNN46_RS24590 (LNN46_24595) | 9756..10214 | - | 459 | WP_000243176.1 | hypothetical protein | - |
| LNN46_RS24595 (LNN46_24600) | 10285..11088 | - | 804 | WP_005031630.1 | hypothetical protein | - |
| LNN46_RS24600 (LNN46_24605) | 11088..11372 | - | 285 | WP_121272465.1 | PAAR domain-containing protein | - |
| LNN46_RS24605 (LNN46_24610) | 11640..12596 | + | 957 | WP_001557707.1 | plasmid segregation protein ParM | - |
| LNN46_RS24610 (LNN46_24615) | 12610..12948 | + | 339 | WP_102218733.1 | plasmid partitioning/stability family protein | - |
| LNN46_RS24615 (LNN46_24620) | 13236..13877 | + | 642 | WP_016262372.1 | Chromosome-partitioning ATPase Soj | VF |
| LNN46_RS24620 (LNN46_24625) | 13870..14157 | + | 288 | WP_000595051.1 | hypothetical protein | - |
| LNN46_RS24625 (LNN46_24630) | 14426..16087 | + | 1662 | WP_001287146.1 | glutamine--tRNA ligase | - |
| LNN46_RS24630 (LNN46_24635) | 16136..16954 | - | 819 | Protein_19 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| LNN46_RS24635 (LNN46_24640) | 17034..17684 | - | 651 | WP_032153356.1 | hypothetical protein | - |
| LNN46_RS24640 (LNN46_24645) | 17698..18603 | - | 906 | WP_001258014.1 | recombination-associated protein RdgC | - |
| LNN46_RS24645 (LNN46_24650) | 18663..19316 | - | 654 | WP_000828873.1 | hypothetical protein | - |
| LNN46_RS24650 (LNN46_24655) | 19313..20293 | - | 981 | WP_000046499.1 | hypothetical protein | - |
| LNN46_RS24655 (LNN46_24660) | 20297..21064 | - | 768 | WP_000203290.1 | hypothetical protein | - |
| LNN46_RS24660 (LNN46_24665) | 21061..21852 | - | 792 | WP_000532305.1 | hypothetical protein | - |
| LNN46_RS24665 (LNN46_24670) | 22015..22317 | + | 303 | WP_000162415.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LNN46_RS24670 (LNN46_24675) | 22388..22726 | + | 339 | WP_000806445.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| LNN46_RS24675 (LNN46_24680) | 22783..22968 | + | 186 | Protein_28 | hypothetical protein | - |
| LNN46_RS24680 (LNN46_24685) | 23005..23733 | + | 729 | WP_000986754.1 | hypothetical protein | - |
| LNN46_RS24685 (LNN46_24690) | 23767..24960 | - | 1194 | WP_102218742.1 | phage tail protein | - |
| LNN46_RS24690 (LNN46_24695) | 24953..25282 | - | 330 | WP_000542383.1 | hypothetical protein | - |
| LNN46_RS24695 (LNN46_24700) | 25611..26264 | - | 654 | WP_000410952.1 | hypothetical protein | - |
| LNN46_RS24700 (LNN46_24705) | 26610..27431 | + | 822 | WP_001427910.1 | hypothetical protein | - |
| LNN46_RS24705 (LNN46_24710) | 27471..27821 | - | 351 | WP_000201621.1 | hypothetical protein | - |
| LNN46_RS24710 (LNN46_24715) | 27967..28251 | - | 285 | WP_000717719.1 | hypothetical protein | - |
| LNN46_RS24715 (LNN46_24720) | 28311..29237 | - | 927 | WP_001054016.1 | Rha family transcriptional regulator | - |
| LNN46_RS24720 (LNN46_24725) | 29237..29452 | - | 216 | WP_000201263.1 | host cell division inhibitor Icd-like protein | - |
| LNN46_RS24725 (LNN46_24730) | 29471..29590 | - | 120 | WP_071526433.1 | ash family protein | - |
| LNN46_RS24730 (LNN46_24735) | 29766..29933 | - | 168 | WP_168420614.1 | hypothetical protein | - |
| LNN46_RS24735 (LNN46_24740) | 30265..30843 | - | 579 | WP_023908602.1 | Ref family recombination enhancement nuclease | - |
| LNN46_RS24740 (LNN46_24745) | 31116..31727 | + | 612 | WP_183022158.1 | DUF4406 domain-containing protein | - |
| LNN46_RS24745 (LNN46_24750) | 31757..32041 | + | 285 | WP_052936027.1 | DNA-binding protein | - |
| LNN46_RS24750 (LNN46_24755) | 32031..32465 | + | 435 | WP_113406458.1 | hypothetical protein | - |
| LNN46_RS24755 (LNN46_24760) | 32462..32737 | + | 276 | WP_058799016.1 | DUF4752 family protein | - |
| LNN46_RS24760 (LNN46_24765) | 32734..32958 | + | 225 | WP_048256676.1 | hypothetical protein | - |
| LNN46_RS24765 (LNN46_24770) | 32955..33266 | + | 312 | WP_000022451.1 | hypothetical protein | - |
| LNN46_RS24770 (LNN46_24775) | 33263..33955 | + | 693 | WP_000613619.1 | metallophosphoesterase | - |
| LNN46_RS24775 (LNN46_24780) | 34053..35048 | + | 996 | WP_063074540.1 | DUF968 domain-containing protein | - |
| LNN46_RS24780 (LNN46_24785) | 35062..35360 | + | 299 | Protein_49 | hypothetical protein | - |
| LNN46_RS24785 (LNN46_24790) | 35347..35934 | + | 588 | WP_047647124.1 | ead/Ea22-like family protein | - |
| LNN46_RS24790 (LNN46_24795) | 35931..36617 | + | 687 | WP_097290468.1 | ead/Ea22-like family protein | - |
| LNN46_RS24795 (LNN46_24800) | 36619..36813 | + | 195 | WP_000224731.1 | hypothetical protein | - |
| LNN46_RS24800 (LNN46_24805) | 36815..37024 | + | 210 | WP_000951710.1 | hypothetical protein | - |
| LNN46_RS24805 (LNN46_24810) | 37021..37146 | + | 126 | Protein_54 | DUF551 domain-containing protein | - |
| LNN46_RS24810 (LNN46_24815) | 37657..37848 | + | 192 | WP_242806062.1 | DUF551 domain-containing protein | - |
| LNN46_RS24815 (LNN46_24820) | 37841..38122 | + | 282 | WP_102218741.1 | ASCH domain-containing protein | - |
| LNN46_RS24820 (LNN46_24825) | 38115..38519 | + | 405 | WP_080077662.1 | hypothetical protein | - |
| LNN46_RS24825 (LNN46_24830) | 38532..38825 | + | 294 | WP_075660654.1 | hypothetical protein | - |
| LNN46_RS24830 (LNN46_24835) | 38825..39001 | + | 177 | WP_157902266.1 | hypothetical protein | - |
| LNN46_RS24835 (LNN46_24840) | 39081..39290 | + | 210 | WP_075660655.1 | hypothetical protein | - |
| LNN46_RS24840 (LNN46_24845) | 39287..40045 | + | 759 | WP_072756859.1 | hypothetical protein | - |
| LNN46_RS24845 (LNN46_24850) | 40360..40611 | + | 252 | WP_063074807.1 | DNA polymerase III subunit theta | - |
| LNN46_RS24850 (LNN46_24855) | 40735..41124 | + | 390 | WP_168420616.1 | S24 family peptidase | - |
| LNN46_RS24855 (LNN46_24860) | 41197..41418 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LNN46_RS24860 (LNN46_24865) | 41418..41798 | + | 381 | WP_168420618.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LNN46_RS24865 (LNN46_24870) | 41882..42682 | - | 801 | WP_168420620.1 | hypothetical protein | - |
| LNN46_RS24870 (LNN46_24875) | 42689..43351 | - | 663 | WP_168420622.1 | DUF2829 domain-containing protein | - |
| LNN46_RS24875 (LNN46_24880) | 43366..43860 | - | 495 | WP_000640906.1 | dUTP diphosphatase | - |
| LNN46_RS24880 (LNN46_24885) | 43857..44333 | - | 477 | WP_000861174.1 | hypothetical protein | - |
| LNN46_RS24885 (LNN46_24890) | 44330..44674 | - | 345 | WP_001191776.1 | hypothetical protein | - |
| LNN46_RS24890 (LNN46_24895) | 44748..45776 | - | 1029 | WP_168420624.1 | tyrosine-type recombinase/integrase | - |
| LNN46_RS24895 (LNN46_24900) | 46171..47208 | + | 1038 | WP_023908617.1 | hypothetical protein | - |
| LNN46_RS24900 (LNN46_24905) | 47236..48744 | - | 1509 | WP_000897063.1 | hypothetical protein | - |
| LNN46_RS24905 (LNN46_24910) | 48744..50108 | - | 1365 | WP_000060660.1 | hypothetical protein | - |
| LNN46_RS24910 (LNN46_24915) | 50105..50497 | - | 393 | WP_000435256.1 | hypothetical protein | - |
| LNN46_RS24915 (LNN46_24920) | 50606..50791 | - | 186 | WP_001130998.1 | hypothetical protein | - |
| LNN46_RS24920 (LNN46_24925) | 50998..51573 | - | 576 | WP_175421541.1 | hypothetical protein | - |
| LNN46_RS24930 (LNN46_24935) | 52257..53084 | - | 828 | WP_032220960.1 | SPFH domain-containing protein | - |
| LNN46_RS24950 (LNN46_24955) | 55658..56881 | - | 1224 | WP_236469954.1 | DivIVA domain-containing protein | - |
| LNN46_RS24955 (LNN46_24960) | 57276..57476 | - | 201 | WP_001238268.1 | hypothetical protein | - |
| LNN46_RS26405 (LNN46_24965) | 57491..57982 | - | 492 | WP_224173528.1 | VRR-NUC domain-containing protein | - |
| LNN46_RS24965 (LNN46_24970) | 58122..58382 | - | 261 | WP_069067271.1 | hypothetical protein | - |
| LNN46_RS24970 (LNN46_24975) | 58385..58819 | - | 435 | WP_163419474.1 | olxA | - |
| LNN46_RS24975 (LNN46_24980) | 58856..65692 | - | 6837 | WP_168420627.1 | SNF2-related protein | - |
| LNN46_RS24980 (LNN46_24985) | 65844..66329 | + | 486 | WP_001273800.1 | TIGR02594 family protein | - |
| LNN46_RS24985 (LNN46_24990) | 66362..66559 | - | 198 | WP_047648389.1 | hypothetical protein | - |
| LNN46_RS24990 (LNN46_24995) | 66559..67266 | - | 708 | WP_053919845.1 | Rha family transcriptional regulator | - |
| LNN46_RS24995 (LNN46_25000) | 67266..67490 | - | 225 | WP_001436278.1 | host cell division inhibitor Icd-like protein | - |
| LNN46_RS25000 (LNN46_25005) | 67905..68867 | - | 963 | WP_168420629.1 | lytic replication protein | - |
| LNN46_RS25005 (LNN46_25010) | 69068..70066 | - | 999 | WP_074417224.1 | head processing protein | - |
| LNN46_RS25010 (LNN46_25015) | 70080..71762 | - | 1683 | WP_000201469.1 | portal protein | - |
| LNN46_RS25015 (LNN46_25020) | 71827..73212 | - | 1386 | WP_102218736.1 | hypothetical protein | - |
| LNN46_RS25020 (LNN46_25025) | 73307..73675 | - | 369 | WP_000156174.1 | hypothetical protein | - |
| LNN46_RS25025 (LNN46_25030) | 73675..75612 | - | 1938 | WP_063074798.1 | hypothetical protein | - |
| LNN46_RS25030 (LNN46_25035) | 75605..76225 | - | 621 | WP_000066534.1 | hypothetical protein | - |
| LNN46_RS25035 (LNN46_25040) | 76215..76661 | - | 447 | WP_000526264.1 | hypothetical protein | - |
| LNN46_RS25040 (LNN46_25045) | 76661..76987 | - | 327 | WP_000457140.1 | holin | - |
| LNN46_RS25045 (LNN46_25050) | 77091..77328 | + | 238 | Protein_98 | recombinase family protein | - |
| LNN46_RS25050 (LNN46_25055) | 77524..78096 | - | 573 | WP_001165547.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| LNN46_RS25055 (LNN46_25060) | 78168..78596 | + | 429 | WP_074152847.1 | phage tail protein | - |
| LNN46_RS25060 (LNN46_25065) | 78637..79065 | + | 429 | WP_024174668.1 | phage tail protein | - |
| LNN46_RS25065 (LNN46_25070) | 79065..79667 | + | 603 | WP_063074797.1 | tail fiber assembly protein | - |
| LNN46_RS25070 (LNN46_25075) | 79639..80055 | - | 417 | WP_097415175.1 | tail fiber assembly protein | - |
| LNN46_RS25075 (LNN46_25080) | 80058..81740 | - | 1683 | WP_168420631.1 | tail fiber protein | - |
| LNN46_RS25080 (LNN46_25085) | 81743..82189 | - | 447 | WP_032220795.1 | hypothetical protein | - |
| LNN46_RS25085 (LNN46_25090) | 82284..83129 | - | 846 | WP_063074754.1 | hypothetical protein | - |
| LNN46_RS25090 (LNN46_25095) | 83140..84570 | - | 1431 | WP_063074755.1 | hypothetical protein | - |
| LNN46_RS25095 (LNN46_25100) | 84567..84941 | - | 375 | WP_032220997.1 | hypothetical protein | - |
| LNN46_RS25100 (LNN46_25105) | 84947..89077 | - | 4131 | WP_224173539.1 | transglycosylase | - |
| LNN46_RS25105 (LNN46_25110) | 89132..89953 | - | 822 | WP_063074821.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|