MGE detailed information

MGE type: Conjugative plasmid        MGE length: 158444 bp
Accession: NZ_CP086449        Location: 1..158444         Organism: Klebsiella pneumoniae strain AE-2247421-T0       Replicon: plasmid p2247421-T0_2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LNN40_RS27845 (LNN40_27850) 1..1011 + 1011 WP_004152063.1 RepB family plasmid replication initiator protein -
LNN40_RS27850 (LNN40_27855) 1728..2468 - 741 WP_001515717.1 tyrosine-type recombinase/integrase -
LNN40_RS27855 (LNN40_27860) 3612..4559 + 948 WP_004152065.1 sensor domain-containing diguanylate cyclase -
LNN40_RS27860 (LNN40_27865) 4586..4897 - 312 WP_071527918.1 EAL domain-containing protein -
LNN40_RS27865 (LNN40_27870) 4917..5885 + 969 WP_011977741.1 IS5-like element IS903B family transposase -
LNN40_RS27870 (LNN40_27875) 6558..6815 - 258 WP_004197688.1 hypothetical protein -
LNN40_RS27875 (LNN40_27880) 7456..7971 + 516 Protein_6 CSS-motif domain-containing protein -
LNN40_RS27880 (LNN40_27885) 8035..8871 + 837 WP_004178087.1 EAL domain-containing protein -
LNN40_RS27885 (LNN40_27890) 9854..11131 - 1278 WP_004152070.1 DUF2254 domain-containing protein -
LNN40_RS27890 (LNN40_27895) 11194..13191 - 1998 WP_004178088.1 choline BCCT transporter BetT -
LNN40_RS27905 (LNN40_27910) 15529..16013 + 485 Protein_12 IS1-like element IS1X2 family transposase -
LNN40_RS27910 (LNN40_27915) 16029..16571 + 543 Protein_13 ISL3-like element ISKpn25 family transposase -
LNN40_RS27915 (LNN40_27920) 16867..17298 - 432 WP_004178091.1 silver-binding protein SilE -
LNN40_RS27920 (LNN40_27925) 17549..19024 - 1476 WP_003032875.1 copper/silver sensor histidine kinase SilS -
LNN40_RS27925 (LNN40_27930) 19017..19697 - 681 WP_001572351.1 copper/silver response regulator transcription factor SilR -
LNN40_RS27930 (LNN40_27935) 19887..21272 + 1386 WP_000475512.1 Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC -
LNN40_RS27935 (LNN40_27940) 21301..21654 + 354 WP_001246153.1 cation efflux system protein CusF -
LNN40_RS27940 (LNN40_27945) 21768..23060 + 1293 WP_004152079.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
LNN40_RS27945 (LNN40_27950) 23071..26217 + 3147 WP_004098958.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
LNN40_RS27950 (LNN40_27955) 26304..26744 + 441 WP_000758228.1 DUF411 domain-containing protein -
LNN40_RS27955 (LNN40_27960) 26871..29318 + 2448 WP_004098955.1 Ag(+)-translocating P-type ATPase SilP -
LNN40_RS27960 (LNN40_27965) 29359..29556 + 198 WP_000843497.1 DUF2933 domain-containing protein -
LNN40_RS27965 (LNN40_27970) 29590..30327 - 738 WP_004118669.1 peptidoglycan DD-metalloendopeptidase family protein -
LNN40_RS27970 (LNN40_27975) 30616..31065 - 450 WP_001023257.1 copper resistance protein -
LNN40_RS27975 (LNN40_27980) 31299..33116 + 1818 WP_000925242.1 multicopper oxidase PcoA -
LNN40_RS27980 (LNN40_27985) 33122..34012 + 891 WP_001378118.1 copper resistance outer membrane transporter PcoB -
LNN40_RS27985 (LNN40_27990) 34052..34432 + 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
LNN40_RS27990 (LNN40_27995) 34437..35366 + 930 WP_004118344.1 copper resistance inner membrane protein PcoD -
LNN40_RS27995 (LNN40_28000) 35421..36101 + 681 WP_001188930.1 copper response regulator transcription factor PcoR -
LNN40_RS28000 (LNN40_28005) 36098..37498 + 1401 WP_004152084.1 copper resistance membrane spanning protein PcoS -
LNN40_RS28005 (LNN40_28010) 37715..38149 + 435 WP_004152085.1 copper resistance system metallochaperone PcoE -
LNN40_RS28010 (LNN40_28015) 38381..38560 - 180 WP_004152086.1 type II toxin-antitoxin system RelE/ParE family toxin -
LNN40_RS28015 (LNN40_28020) 38621..40241 - 1621 Protein_34 ISL3 family transposase -
LNN40_RS28020 (LNN40_28025) 40303..40812 + 510 WP_031944101.1 aquaporin -
LNN40_RS28025 (LNN40_28030) 40862..41359 - 498 WP_004152091.1 GNAT family N-acetyltransferase -
LNN40_RS28030 (LNN40_28035) 41691..42017 + 327 WP_004152092.1 metalloregulator ArsR/SmtB family transcription factor -
LNN40_RS28035 (LNN40_28040) 42014..42727 + 714 WP_004152093.1 arsenical resistance protein ArsH -
LNN40_RS28040 (LNN40_28045) 42736..43281 + 546 WP_004182005.1 sigma-70 family RNA polymerase sigma factor -
LNN40_RS28045 (LNN40_28050) 43357..43719 + 363 WP_004152095.1 arsenic metallochaperone ArsD family protein -
LNN40_RS28050 (LNN40_28055) 43738..45494 + 1757 Protein_41 arsenical pump-driving ATPase -
LNN40_RS28055 (LNN40_28060) 45616..46152 + 537 WP_004152096.1 GNAT family N-acetyltransferase -
LNN40_RS28060 (LNN40_28065) 46185..46610 - 426 WP_004152097.1 glutaredoxin-dependent arsenate reductase -
LNN40_RS28065 (LNN40_28070) 46623..47912 - 1290 WP_004152098.1 arsenite efflux transporter membrane subunit ArsB -
LNN40_RS28070 (LNN40_28075) 47960..49711 - 1752 WP_004152099.1 arsenite efflux transporter ATPase subunit ArsA -
LNN40_RS28075 (LNN40_28080) 49729..50091 - 363 WP_004152100.1 arsenite efflux transporter metallochaperone ArsD -
LNN40_RS28080 (LNN40_28085) 50141..50491 - 351 WP_004152101.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
LNN40_RS28085 (LNN40_28090) 50849..51118 + 270 WP_004152102.1 hypothetical protein -
LNN40_RS28090 (LNN40_28095) 51106..51681 + 576 WP_004152103.1 hypothetical protein -
LNN40_RS28095 (LNN40_28100) 51712..52206 + 495 WP_004152104.1 DNA-binding protein -
LNN40_RS28100 (LNN40_28105) 52250..52618 + 369 WP_004152105.1 hypothetical protein -
LNN40_RS28105 (LNN40_28110) 52652..52855 + 204 WP_004152106.1 HHA domain-containing protein -
LNN40_RS28110 (LNN40_28115) 52904..53161 + 258 WP_004152107.1 hypothetical protein -
LNN40_RS28115 (LNN40_28120) 53237..53491 + 255 WP_004152108.1 hypothetical protein -
LNN40_RS28120 (LNN40_28125) 53667..53933 + 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
LNN40_RS28125 (LNN40_28130) 53921..54403 + 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
LNN40_RS28130 (LNN40_28135) 54604..56007 + 1404 WP_001567368.1 ISNCY-like element ISKpn21 family transposase -
LNN40_RS28135 (LNN40_28140) 56036..56668 - 633 WP_001567369.1 hypothetical protein -
LNN40_RS28140 (LNN40_28145) 56898..58244 + 1347 WP_020314316.1 ISNCY family transposase -
LNN40_RS29710 58405..58536 + 132 WP_004218042.1 hypothetical protein -
LNN40_RS28145 (LNN40_28150) 58745..59910 - 1166 Protein_61 IS3 family transposase -
LNN40_RS28150 (LNN40_28155) 60087..61049 - 963 WP_004152113.1 zinc metalloprotease HtpX -
LNN40_RS28155 (LNN40_28160) 61036..61524 - 489 WP_004152114.1 phosphate-starvation-inducible PsiE family protein -
LNN40_RS28160 (LNN40_28165) 61639..61785 - 147 Protein_64 diguanylate cyclase -
LNN40_RS28165 (LNN40_28170) 62023..62220 - 198 WP_004152115.1 hypothetical protein -
LNN40_RS28170 (LNN40_28175) 62220..65015 - 2796 WP_004152116.1 heat shock survival AAA family ATPase ClpK -
LNN40_RS28175 (LNN40_28180) 65130..65699 - 570 WP_004152117.1 small heat shock protein sHSP20 -
LNN40_RS28180 (LNN40_28185) 65734..66015 - 282 WP_004152118.1 helix-turn-helix domain-containing protein -
LNN40_RS28185 (LNN40_28190) 66259..66522 - 264 WP_004118208.1 hypothetical protein -
LNN40_RS28190 (LNN40_28195) 66537..66800 + 264 WP_004118209.1 transposase -
LNN40_RS28195 (LNN40_28200) 66745..66861 + 117 Protein_71 transposase domain-containing protein -
LNN40_RS28200 (LNN40_28205) 67046..67743 + 698 WP_223174644.1 IS1 family transposase -
LNN40_RS28205 (LNN40_28210) 68002..68982 + 981 WP_000019473.1 IS5-like element ISKpn26 family transposase -
LNN40_RS28210 (LNN40_28215) 69564..70083 - 520 Protein_74 IS5-like element ISPst7 family transposase -
LNN40_RS28215 (LNN40_28220) 70191..71060 - 870 WP_004152692.1 LysR family transcriptional regulator -
LNN40_RS28220 (LNN40_28225) 71054..72064 - 1011 WP_004152693.1 phosphonate dehydrogenase PtxD -
LNN40_RS28225 (LNN40_28230) 72073..72900 - 828 WP_004152694.1 phosphonate ABC transporter, permease protein PhnE -
LNN40_RS28230 (LNN40_28235) 72909..73772 - 864 WP_004152695.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
LNN40_RS28235 (LNN40_28240) 73769..74596 - 828 WP_004153729.1 phosphonate ABC transporter ATP-binding protein -
LNN40_RS28240 (LNN40_28245) 74938..75246 + 309 Protein_80 IS5/IS1182 family transposase -
LNN40_RS28245 (LNN40_28250) 75452..76156 - 705 WP_004217321.1 IS6-like element IS26 family transposase -
LNN40_RS28250 (LNN40_28255) 76147..76737 + 591 WP_004197543.1 recombinase family protein -
LNN40_RS28255 (LNN40_28260) 76767..77633 - 867 WP_004197546.1 class A beta-lactamase SCO-1 -
LNN40_RS28260 (LNN40_28265) 77795..78994 + 1200 WP_004197531.1 cellulase family glycosylhydrolase -
LNN40_RS28265 (LNN40_28270) 79186..79377 - 192 Protein_85 methyltransferase -
LNN40_RS28270 (LNN40_28275) 80013..80993 + 981 WP_000019473.1 IS5-like element ISKpn26 family transposase -
LNN40_RS28275 (LNN40_28280) 81329..82606 - 1278 WP_004197540.1 Y-family DNA polymerase -
LNN40_RS28280 (LNN40_28285) 82612..83040 - 429 WP_004197551.1 S24 family peptidase -
LNN40_RS28285 (LNN40_28290) 83136..83408 - 273 WP_004197545.1 helix-turn-helix transcriptional regulator -
LNN40_RS28290 (LNN40_28295) 83533..84293 + 761 WP_085947932.1 IS5-like element ISKpn12 family transposase -
LNN40_RS28295 (LNN40_28300) 85185..85370 + 186 WP_004197549.1 hypothetical protein -
LNN40_RS28300 (LNN40_28305) 85436..85918 - 483 Protein_92 IS3 family transposase -
LNN40_RS28305 (LNN40_28310) 85987..87495 - 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
LNN40_RS28310 (LNN40_28315) 88159..88844 - 686 Protein_94 IS3-like element ISKpn11 family transposase -
LNN40_RS28315 (LNN40_28320) 88930..89190 - 261 Protein_95 hypothetical protein -
LNN40_RS28320 (LNN40_28325) 89203..90063 - 861 WP_000557452.1 aminoglycoside N-acetyltransferase AAC(3)-IIe -
LNN40_RS28325 (LNN40_28330) 90205..91065 - 861 WP_000027057.1 broad-spectrum class A beta-lactamase TEM-1 -
LNN40_RS28330 (LNN40_28335) 91248..91805 - 558 WP_001235713.1 recombinase family protein -
LNN40_RS28335 (LNN40_28340) 91969..92175 + 207 Protein_99 DUF4158 domain-containing protein -
LNN40_RS28340 (LNN40_28345) 92369..93631 + 1263 WP_000608644.1 IS1380-like element ISEcp1 family transposase -
LNN40_RS28345 (LNN40_28350) 93838..94818 - 981 WP_000019473.1 IS5-like element ISKpn26 family transposase -
LNN40_RS28350 (LNN40_28355) 94889..95122 - 234 Protein_102 PIN domain-containing protein -
LNN40_RS28355 (LNN40_28360) 95283..95876 - 594 WP_023280883.1 fertility inhibition protein FinO -
LNN40_RS28360 (LNN40_28365) 96033..96758 - 726 WP_031944112.1 type-F conjugative transfer system pilin acetylase TraX -
LNN40_RS28365 (LNN40_28370) 96802..102063 - 5262 WP_031944111.1 conjugative transfer relaxase/helicase TraI -
LNN40_RS28370 (LNN40_28375) 102063..104375 - 2313 WP_031944110.1 type IV conjugative transfer system coupling protein TraD -
LNN40_RS28375 (LNN40_28380) 104735..105466 - 732 WP_004152629.1 conjugal transfer complement resistance protein TraT -
LNN40_RS28380 (LNN40_28385) 105656..106183 - 528 WP_004153030.1 hypothetical protein -
LNN40_RS28385 (LNN40_28390) 106189..109038 - 2850 WP_004178054.1 conjugal transfer mating-pair stabilization protein TraG -
LNN40_RS28390 (LNN40_28395) 109038..110408 - 1371 WP_004178055.1 conjugal transfer pilus assembly protein TraH -
LNN40_RS28395 (LNN40_28400) 110395..110823 - 429 WP_004152689.1 hypothetical protein -
LNN40_RS28400 (LNN40_28405) 110816..111388 - 573 WP_004152688.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
LNN40_RS28405 (LNN40_28410) 111360..111599 - 240 WP_004152687.1 type-F conjugative transfer system pilin chaperone TraQ -
LNN40_RS28410 (LNN40_28415) 111610..112362 - 753 WP_004152686.1 type-F conjugative transfer system pilin assembly protein TraF -
LNN40_RS28415 (LNN40_28420) 112383..112709 - 327 WP_004152685.1 hypothetical protein -
LNN40_RS28420 (LNN40_28425) 112937..113173 - 237 WP_004152683.1 conjugal transfer protein TrbE -
LNN40_RS28425 (LNN40_28430) 113205..115160 - 1956 WP_004153093.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
LNN40_RS28430 (LNN40_28435) 115208..115846 - 639 WP_004152682.1 type-F conjugative transfer system pilin assembly protein TrbC -
LNN40_RS28435 (LNN40_28440) 115859..116818 - 960 WP_015065634.1 conjugal transfer pilus assembly protein TraU -
LNN40_RS28440 (LNN40_28445) 116862..117488 - 627 WP_004152590.1 type-F conjugative transfer system protein TraW -
LNN40_RS28445 (LNN40_28450) 117488..117877 - 390 WP_004152591.1 type-F conjugative transfer system protein TrbI -
LNN40_RS28450 (LNN40_28455) 117877..120516 - 2640 WP_004152592.1 type IV secretion system protein TraC -
LNN40_RS28455 (LNN40_28460) 120588..120986 - 399 WP_004153071.1 hypothetical protein -
LNN40_RS28460 (LNN40_28465) 121282..121686 - 405 WP_031944109.1 hypothetical protein -
LNN40_RS28465 (LNN40_28470) 121753..122070 - 318 WP_004152595.1 hypothetical protein -
LNN40_RS28470 (LNN40_28475) 122071..122289 - 219 WP_004171484.1 hypothetical protein -
LNN40_RS28475 (LNN40_28480) 122313..122603 - 291 WP_004152596.1 hypothetical protein -
LNN40_RS28480 (LNN40_28485) 122608..123018 - 411 WP_004152597.1 lipase chaperone -
LNN40_RS28485 (LNN40_28490) 123150..123719 - 570 WP_004152598.1 type IV conjugative transfer system lipoprotein TraV -
LNN40_RS28490 (LNN40_28495) 123742..124338 - 597 WP_004152599.1 conjugal transfer pilus-stabilizing protein TraP -
LNN40_RS28495 (LNN40_28500) 124331..125755 - 1425 WP_004152600.1 F-type conjugal transfer pilus assembly protein TraB -
LNN40_RS28500 (LNN40_28505) 125755..126495 - 741 WP_004152601.1 type-F conjugative transfer system secretin TraK -
LNN40_RS28505 (LNN40_28510) 126482..127048 - 567 WP_004152602.1 type IV conjugative transfer system protein TraE -
LNN40_RS28510 (LNN40_28515) 127068..127373 - 306 WP_004178059.1 type IV conjugative transfer system protein TraL -
LNN40_RS28515 (LNN40_28520) 127387..127755 - 369 WP_004178060.1 type IV conjugative transfer system pilin TraA -
LNN40_RS28520 (LNN40_28525) 127809..128180 - 372 WP_004208838.1 TraY domain-containing protein -
LNN40_RS28525 (LNN40_28530) 128264..128959 - 696 WP_004178061.1 transcriptional regulator TraJ family protein -
LNN40_RS28530 (LNN40_28535) 129173..129565 - 393 WP_004178062.1 conjugal transfer relaxosome DNA-binding protein TraM -
LNN40_RS28535 (LNN40_28540) 129999..130484 + 486 WP_004178063.1 transglycosylase SLT domain-containing protein -
LNN40_RS28540 (LNN40_28545) 130517..130846 - 330 WP_011977736.1 DUF5983 family protein -
LNN40_RS28545 (LNN40_28550) 130879..131700 - 822 WP_004178064.1 DUF932 domain-containing protein -
LNN40_RS28550 (LNN40_28555) 132007..132975 + 969 WP_073970534.1 IS5 family transposase -
LNN40_RS28555 (LNN40_28560) 133600..134013 - 414 WP_004152722.1 helix-turn-helix domain-containing protein -
LNN40_RS28560 (LNN40_28565) 134014..134292 - 279 WP_004152721.1 helix-turn-helix transcriptional regulator -
LNN40_RS28565 (LNN40_28570) 134282..134602 - 321 WP_004152720.1 type II toxin-antitoxin system RelE/ParE family toxin -
LNN40_RS28570 (LNN40_28575) 134683..134907 - 225 WP_004152719.1 hypothetical protein -
LNN40_RS28575 (LNN40_28580) 134918..135130 - 213 WP_004152718.1 hypothetical protein -
LNN40_RS28580 (LNN40_28585) 135191..135547 - 357 WP_004152717.1 hypothetical protein -
LNN40_RS28585 (LNN40_28590) 136183..136533 - 351 WP_004152758.1 hypothetical protein -
LNN40_RS28590 (LNN40_28595) 136530..136802 - 273 WP_004152759.1 hypothetical protein -
LNN40_RS28595 (LNN40_28600) 137502..137624 - 123 WP_085842394.1 Hok/Gef family protein -
LNN40_RS28600 (LNN40_28605) 137569..137721 - 153 Protein_152 DUF5431 family protein -
LNN40_RS28605 (LNN40_28610) 137891..138265 - 375 WP_004152638.1 hypothetical protein -
LNN40_RS28610 (LNN40_28615) 138321..138647 - 327 WP_004152639.1 hypothetical protein -
LNN40_RS28615 (LNN40_28620) 138644..139372 - 729 WP_004152640.1 plasmid SOS inhibition protein A -
LNN40_RS28620 (LNN40_28625) 139369..139800 - 432 WP_004152641.1 conjugation system SOS inhibitor PsiB -
LNN40_RS28625 (LNN40_28630) 139845..141903 - 2059 Protein_157 ParB/RepB/Spo0J family partition protein -
LNN40_RS28630 (LNN40_28635) 141973..142221 - 249 WP_004152643.1 DUF905 domain-containing protein -
LNN40_RS28635 (LNN40_28640) 142270..142812 - 543 WP_004152644.1 single-stranded DNA-binding protein -
LNN40_RS28640 (LNN40_28645) 143588..144151 - 564 WP_004152645.1 methyltransferase -
LNN40_RS28645 (LNN40_28650) 144199..145554 - 1356 WP_004178068.1 DUF3560 domain-containing protein -
LNN40_RS28650 (LNN40_28655) 145606..145836 - 231 WP_004198570.1 hypothetical protein -
LNN40_RS28655 (LNN40_28660) 145928..146155 - 228 WP_004178072.1 hypothetical protein -
LNN40_RS28660 (LNN40_28665) 146937..147254 - 318 WP_004118473.1 hypothetical protein -
LNN40_RS28665 (LNN40_28670) 147289..147543 - 255 WP_004152754.1 DNA polymerase III subunit theta -
LNN40_RS28670 (LNN40_28675) 147780..148205 - 426 WP_004118478.1 antirestriction protein -
LNN40_RS28675 (LNN40_28680) 148726..148956 - 231 WP_004152753.1 hypothetical protein -
LNN40_RS28680 (LNN40_28685) 149190..150677 - 1488 WP_004178082.1 group II intron reverse transcriptase/maturase -
LNN40_RS28685 (LNN40_28690) 151080..151505 + 426 WP_004178083.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
LNN40_RS28690 (LNN40_28695) 151505..152776 + 1272 WP_004152715.1 Y-family DNA polymerase -
LNN40_RS28695 (LNN40_28700) 152915..153070 + 156 WP_001776126.1 hypothetical protein -
LNN40_RS28700 (LNN40_28705) 153093..154291 - 1199 Protein_172 transposase -
LNN40_RS28705 (LNN40_28710) 155556..156527 - 972 WP_004152062.1 ParB/RepB/Spo0J family plasmid partition protein -
LNN40_RS28710 (LNN40_28715) 156527..157693 - 1167 WP_000523813.1 plasmid-partitioning protein SopA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance