MGE detailed information
MGE type: Genomic_island MGE length: 12700 bp
Accession: NZ_CP086391 Location: 3410677..3423376 Organism: Escherichia coli strain 1585m1 Replicon: chromosome
Accession: NZ_CP086391 Location: 3410677..3423376 Organism: Escherichia coli strain 1585m1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LM401_RS18765 (3406257) | 3406257..3406709 | - | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
| LM401_RS18770 (3406706) | 3406706..3407761 | - | 1056 | WP_001226183.1 | DNA polymerase IV | - |
| LM401_RS18775 (3407832) | 3407832..3408617 | - | 786 | WP_000207575.1 | putative lateral flagellar export/assembly protein LafU | - |
| LM401_RS18780 (3408589) | 3408589..3410301 | + | 1713 | Protein_3248 | flagellar biosynthesis protein FlhA | - |
| LM401_RS18785 (3410406) | 3410406..3410684 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| LM401_RS18790 (3410677) | 3410677..3411033 | + | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LM401_RS18795 (3411090) | 3411090..3411863 | - | 774 | WP_000543895.1 | Murein DD-endopeptidase MepH | VF |
| LM401_RS18800 (3412049) | 3412049..3412309 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| LM401_RS18805 (3412312) | 3412312..3412590 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| LM401_RS18810 (3412746) | 3412746..3413486 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| LM401_RS18815 (3413457) | 3413457..3414224 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| LM401_RS18820 (3414430) | 3414430..3415008 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| LM401_RS18825 (3415248) | 3415248..3417692 | + | 2445 | WP_000973081.1 | Acyl-coenzyme A dehydrogenase | VF |
| LM401_RS18830 (3417735) | 3417735..3418181 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| LM401_RS18835 (3418362) | 3418362..3419132 | + | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| LM401_RS18840 (3419174) | 3419174..3420310 | - | 1137 | Protein_3260 | ISAs1 family transposase ISEc1 | Transposase |
| LM401_RS18845 (3420413) | 3420413..3421539 | - | 1127 | Protein_3261 | ISAs1 family transposase ISEc26 | Transposase |
| LM401_RS18850 (3421620) | 3421620..3421805 | + | 186 | WP_122985282.1 | hypothetical protein | - |
| LM401_RS18855 (3421720) | 3421720..3421983 | - | 264 | WP_001513053.1 | hypothetical protein | - |
| LM401_RS18860 (3422636) | 3422636..3423550 | - | 915 | Protein_3264 | Protein RhsD | VF |
| LM401_RS18865 (3423586) | 3423586..3425804 | - | 2219 | Protein_3265 | DUF6531 domain-containing protein | - |
| LM401_RS18870 (3425913) | 3425913..3428054 | - | 2142 | WP_000103320.1 | type VI secretion system tip protein VgrG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|