MGE detailed information
MGE type: Genomic_island MGE length: 10758 bp
Accession: NZ_CP086334 Location: 2234811..2245568 Organism: Escherichia coli strain EBJ003 Replicon: chromosome
Accession: NZ_CP086334 Location: 2234811..2245568 Organism: Escherichia coli strain EBJ003 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5N12_RS10935 (2230157) | 2230157..2230939 | - | 783 | WP_001521911.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| C5N12_RS10940 (2231255) | 2231255..2234464 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| C5N12_RS10945 (2234811) | 2234811..2235281 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| C5N12_RS10950 (2235278) | 2235278..2235380 | + | 103 | Protein_2148 | helix-turn-helix domain-containing protein | - |
| C5N12_RS10955 (2235472) | 2235472..2235630 | + | 159 | Protein_2149 | integrase | - |
| C5N12_RS10965 (2235835) | 2235835..2237088 | - | 1254 | WP_001521908.1 | glutamate-5-semialdehyde dehydrogenase | - |
| C5N12_RS10970 (2237100) | 2237100..2238203 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| C5N12_RS10975 (2238491) | 2238491..2239546 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| C5N12_RS10980 (2239585) | 2239585..2239986 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (2240704) | 2240704..2240784 | - | 81 | NuclAT_11 | - | - |
| - (2240704) | 2240704..2240784 | - | 81 | NuclAT_11 | - | - |
| - (2240704) | 2240704..2240784 | - | 81 | NuclAT_11 | - | - |
| - (2240704) | 2240704..2240784 | - | 81 | NuclAT_11 | - | - |
| C5N12_RS10985 (2240044) | 2240044..2241288 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| C5N12_RS10990 (2241380) | 2241380..2241838 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| C5N12_RS10995 (2242099) | 2242099..2243556 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| C5N12_RS11000 (2243613) | 2243613..2243965 | - | 353 | Protein_2157 | peptide chain release factor H | - |
| C5N12_RS11005 (2243961) | 2243961..2244167 | - | 207 | Protein_2158 | RtcB family protein | - |
| C5N12_RS11010 (2244412) | 2244412..2244864 | - | 453 | WP_023144376.1 | GNAT family N-acetyltransferase | - |
| C5N12_RS11015 (2244874) | 2244874..2245272 | - | 399 | WP_001521903.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| C5N12_RS11020 (2245275) | 2245275..2245568 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| C5N12_RS11025 (2245620) | 2245620..2246675 | - | 1056 | WP_001226177.1 | DNA polymerase IV | - |
| C5N12_RS11030 (2246746) | 2246746..2247531 | - | 786 | WP_000207556.1 | putative lateral flagellar export/assembly protein LafU | - |
| C5N12_RS11035 (2247503) | 2247503..2249215 | + | 1713 | Protein_2164 | flagellar biosynthesis protein FlhA | - |
| C5N12_RS11040 (2249294) | 2249294..2249647 | + | 354 | WP_024166466.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| C5N12_RS11045 (2249704) | 2249704..2250453 | - | 750 | WP_016233951.1 | C40 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|