MGE detailed information
MGE type: Conjugative plasmid MGE length: 51013 bp
Accession: NZ_CP086262 Location: 1..51013 Organism: Escherichia coli strain SCPM-O-B-9427 Replicon: plasmid pB-9427-3
Accession: NZ_CP086262 Location: 1..51013 Organism: Escherichia coli strain SCPM-O-B-9427 Replicon: plasmid pB-9427-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMH79_RS26600 (LMH79_26625) | 188..490 | - | 303 | WP_001096511.1 | hypothetical protein | - |
| LMH79_RS26605 (LMH79_26630) | 580..1239 | - | 660 | WP_000516232.1 | division plane positioning ATPase MipZ | - |
| LMH79_RS26610 (LMH79_26635) | 1792..2115 | + | 324 | WP_000432873.1 | hypothetical protein | - |
| LMH79_RS26615 (LMH79_26640) | 2469..2813 | + | 345 | WP_001146936.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LMH79_RS26620 (LMH79_26645) | 2800..3150 | + | 351 | WP_000127482.1 | addiction module antitoxin | - |
| LMH79_RS26625 (LMH79_26650) | 3984..4499 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| LMH79_RS26630 (LMH79_26655) | 4603..5145 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| LMH79_RS26635 (LMH79_26660) | 5142..5396 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| LMH79_RS26640 (LMH79_26665) | 5393..5635 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| LMH79_RS26645 (LMH79_26670) | 5908..6090 | + | 183 | WP_001744154.1 | hypothetical protein | - |
| LMH79_RS26650 (LMH79_26675) | 6206..6499 | + | 294 | WP_000673431.1 | hypothetical protein | - |
| LMH79_RS26655 (LMH79_26680) | 6804..7091 | + | 288 | WP_000606467.1 | hypothetical protein | - |
| LMH79_RS26660 (LMH79_26685) | 7519..7752 | + | 234 | WP_000093745.1 | hypothetical protein | - |
| LMH79_RS26665 (LMH79_26690) | 7828..8130 | + | 303 | WP_106504554.1 | CcgAII protein | - |
| LMH79_RS26670 (LMH79_26695) | 8402..8551 | + | 150 | WP_000903193.1 | hypothetical protein | - |
| LMH79_RS26675 (LMH79_26700) | 8662..9483 | + | 822 | WP_032283064.1 | DUF932 domain-containing protein | - |
| LMH79_RS26680 (LMH79_26705) | 9780..10427 | - | 648 | WP_000614287.1 | hypothetical protein | VF |
| LMH79_RS26685 (LMH79_26710) | 10713..11096 | + | 384 | WP_001151564.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LMH79_RS26690 (LMH79_26715) | 11290..11976 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| LMH79_RS26695 (LMH79_26720) | 12070..12297 | + | 228 | WP_001254390.1 | conjugal transfer relaxosome protein TraY | - |
| LMH79_RS26700 (LMH79_26725) | 12331..12696 | + | 366 | WP_228355623.1 | type IV conjugative transfer system pilin TraA | - |
| LMH79_RS26705 (LMH79_26730) | 12711..13022 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| LMH79_RS26710 (LMH79_26735) | 13044..13610 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| LMH79_RS26715 (LMH79_26740) | 13597..14325 | + | 729 | WP_001230809.1 | type-F conjugative transfer system secretin TraK | - |
| LMH79_RS26720 (LMH79_26745) | 14325..15752 | + | 1428 | WP_000146638.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LMH79_RS26725 (LMH79_26750) | 15742..16314 | + | 573 | WP_023063811.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| LMH79_RS26730 (LMH79_26755) | 16311..16631 | + | 321 | WP_001462162.1 | conjugal transfer protein TrbD | - |
| LMH79_RS26735 (LMH79_26760) | 16624..16875 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| LMH79_RS26740 (LMH79_26765) | 16872..17387 | + | 516 | WP_001462163.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LMH79_RS26745 (LMH79_26770) | 17522..17743 | + | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| LMH79_RS26750 (LMH79_26775) | 17736..18209 | + | 474 | WP_000549598.1 | hypothetical protein | - |
| LMH79_RS26755 (LMH79_26780) | 18288..18506 | + | 219 | WP_001377841.1 | hypothetical protein | - |
| LMH79_RS26760 (LMH79_26785) | 18534..18881 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| LMH79_RS26765 (LMH79_26790) | 19007..19636 | + | 630 | Protein_33 | TraC family protein | - |
| LMH79_RS26770 (LMH79_26795) | 19801..22431 | + | 2631 | WP_000069752.1 | type IV secretion system protein TraC | - |
| LMH79_RS26775 (LMH79_26800) | 22428..22814 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| LMH79_RS26780 (LMH79_26805) | 22811..23443 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| LMH79_RS26785 (LMH79_26810) | 23440..24432 | + | 993 | WP_000830190.1 | conjugal transfer pilus assembly protein TraU | - |
| LMH79_RS26790 (LMH79_26815) | 24462..24767 | + | 306 | WP_000224411.1 | hypothetical protein | - |
| LMH79_RS26795 (LMH79_26820) | 24776..25414 | + | 639 | WP_032299189.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LMH79_RS26800 (LMH79_26825) | 25411..25782 | + | 372 | WP_000056340.1 | hypothetical protein | - |
| LMH79_RS26805 (LMH79_26830) | 25807..26229 | + | 423 | WP_001229306.1 | HNH endonuclease signature motif containing protein | - |
| LMH79_RS26810 (LMH79_26835) | 26226..28034 | + | 1809 | WP_228355617.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LMH79_RS26815 (LMH79_26840) | 28061..28318 | + | 258 | WP_000864319.1 | conjugal transfer protein TrbE | - |
| LMH79_RS26820 (LMH79_26845) | 28311..29054 | + | 744 | WP_001462109.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LMH79_RS26825 (LMH79_26850) | 29070..29408 | + | 339 | WP_001287905.1 | conjugal transfer protein TrbA | - |
| LMH79_RS26830 (LMH79_26855) | 29535..29819 | + | 285 | WP_000623730.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LMH79_RS26835 (LMH79_26860) | 29806..30351 | + | 546 | WP_000059832.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LMH79_RS26840 (LMH79_26865) | 30341..30623 | + | 283 | Protein_48 | P-type conjugative transfer protein TrbJ | - |
| LMH79_RS26845 (LMH79_26870) | 30610..31002 | + | 393 | WP_000662236.1 | F-type conjugal transfer protein TrbF | - |
| LMH79_RS26850 (LMH79_26875) | 30989..32362 | + | 1374 | WP_021501421.1 | conjugal transfer pilus assembly protein TraH | - |
| LMH79_RS26855 (LMH79_26880) | 32359..35175 | + | 2817 | WP_001007075.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LMH79_RS26860 (LMH79_26885) | 35208..35729 | + | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| LMH79_RS26865 (LMH79_26890) | 35754..36485 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| LMH79_RS26870 (LMH79_26895) | 36688..37425 | + | 738 | WP_032246346.1 | hypothetical protein | - |
| LMH79_RS26875 (LMH79_26900) | 37476..39683 | + | 2208 | WP_228355618.1 | type IV conjugative transfer system coupling protein TraD | - |
| LMH79_RS26880 (LMH79_26905) | 39683..44953 | + | 5271 | WP_086210984.1 | Multifunctional conjugation protein TraI | Relaxase |
| LMH79_RS26885 (LMH79_26910) | 44973..45719 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| LMH79_RS26890 (LMH79_26915) | 45774..46334 | + | 561 | WP_086200716.1 | fertility inhibition protein FinO | - |
| LMH79_RS26895 (LMH79_26920) | 46466..46678 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| LMH79_RS26900 (LMH79_26925) | 46924..47385 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| LMH79_RS26905 (LMH79_26930) | 47431..47640 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| LMH79_RS26910 (LMH79_26935) | 47678..48268 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| LMH79_RS26915 (LMH79_26940) | 48508..48762 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| LMH79_RS26920 (LMH79_26945) | 48801..49037 | - | 237 | WP_228355621.1 | replication protein RepA | - |
| LMH79_RS26925 (LMH79_26950) | 49028..49075 | + | 48 | WP_077822033.1 | hypothetical protein | - |
| LMH79_RS26930 (LMH79_26955) | 49068..49925 | + | 858 | WP_000130985.1 | incFII family plasmid replication initiator RepA | - |
| LMH79_RS26935 (LMH79_26960) | 50628..50819 | + | 192 | WP_032283045.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|