NZ_CP0862581..171394

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 171394 bp
Accession: NZ_CP086258        Location: 1..171394         Organism: Providencia rettgeri strain KM4       Replicon: plasmid unnamed


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LL668_RS20220 (LL668_20255) 389..1384 + 996 WP_123382828.1 conjugal transfer pilus assembly protein TraU -
LL668_RS20225 (LL668_20260) 1400..2017 + 618 WP_228367765.1 type-F conjugative transfer system pilin assembly protein TrbC -
LL668_RS20230 (LL668_20265) 2017..4080 + 2064 WP_282564857.1 conjugal transfer protein TraN -
LL668_RS20235 (LL668_20270) 3996..4646 + 651 Protein_4 type-F conjugative transfer system pilin assembly protein TraF -
LL668_RS20240 (LL668_20275) 4648..5016 + 369 WP_282564858.1 hypothetical protein -
LL668_RS20245 (LL668_20280) 4935..5474 + 540 WP_228367768.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
LL668_RS20255 (LL668_20290) 5822..6217 + 396 WP_228367770.1 hypothetical protein -
LL668_RS20260 (LL668_20295) 6413..7762 + 1350 Protein_8 conjugal transfer pilus assembly protein TraH -
LL668_RS20265 (LL668_20300) 7810..10683 + 2874 WP_228367772.1 conjugal transfer mating-pair stabilization protein TraG -
LL668_RS20270 (LL668_20305) 10697..11239 + 543 WP_228367773.1 hypothetical protein -
LL668_RS20275 (LL668_20310) 11220..11867 + 648 WP_228367779.1 hypothetical protein -
LL668_RS20280 (LL668_20315) 12006..12089 + 84 WP_267081385.1 hypothetical protein -
LL668_RS20285 (LL668_20320) 12146..12538 + 393 WP_228367775.1 hypothetical protein -
LL668_RS20290 (LL668_20325) 12611..14953 + 2343 WP_282564860.1 type IV conjugative transfer system coupling protein TraD -
LL668_RS20295 (LL668_20330) 14848..19956 + 5109 WP_282564873.1 Multifunctional conjugation protein TraI Relaxase
LL668_RS20300 (LL668_20335) 20368..21306 + 939 WP_228367782.1 RepA family replication protein -
LL668_RS20305 (LL668_20340) 22012..22632 + 621 WP_282564861.1 ProQ/FINO family protein -
LL668_RS20310 (LL668_20345) 22578..23195 + 618 Protein_18 DUF2913 family protein -
LL668_RS20315 (LL668_20350) 23444..24379 + 936 WP_110592970.1 Recombination-promoting nuclease RpnA VF
LL668_RS20320 (LL668_20355) 24387..24563 - 177 WP_272526671.1 hypothetical protein -
LL668_RS20325 (LL668_20360) 24856..25126 - 271 Protein_21 hypothetical protein -
LL668_RS20330 (LL668_20365) 25108..25407 - 300 Protein_22 helix-turn-helix domain-containing protein -
LL668_RS20335 (LL668_20370) 25524..25764 - 241 Protein_23 resolvase -
LL668_RS20340 (LL668_20375) 26019..26231 + 213 WP_110592971.1 cold-shock protein -
LL668_RS21090 26244..26360 + 117 WP_232799088.1 hypothetical protein -
LL668_RS20350 (LL668_20385) 27100..27279 - 180 WP_228367785.1 hypothetical protein -
LL668_RS20355 (LL668_20390) 27799..28725 - 927 WP_228367786.1 Lipid A biosynthesis palmitoleoyltransferase VF
LL668_RS20360 (LL668_20395) 28881..29495 + 615 Protein_28 IS6 family transposase -
LL668_RS20365 (LL668_20400) 29517..29609 - 93 Protein_29 IS6 family transposase -
LL668_RS20370 (LL668_20405) 29702..30043 - 342 WP_282564862.1 hypothetical protein -
LL668_RS21195 30307..30465 + 159 Protein_31 recombinase family protein -
LL668_RS20375 (LL668_20410) 30566..31900 - 1335 WP_228367788.1 DUF1343 domain-containing protein -
LL668_RS20380 (LL668_20415) 31943..33031 - 1089 WP_228367789.1 hypothetical protein -
LL668_RS20385 (LL668_20420) 33063..34931 - 1869 WP_228367790.1 glycoside hydrolase family 3 protein -
LL668_RS20390 (LL668_20425) 35389..36649 - 1261 Protein_35 IS3 family transposase -
LL668_RS20395 (LL668_20430) 38116..38541 + 426 WP_282564863.1 helix-turn-helix transcriptional regulator -
LL668_RS20400 (LL668_20435) 38893..39210 - 318 WP_282559922.1 helix-turn-helix transcriptional regulator -
LL668_RS20405 (LL668_20440) 40695..41036 + 342 WP_228367792.1 helix-turn-helix transcriptional regulator -
LL668_RS20410 (LL668_20445) 41109..41639 + 531 WP_228367793.1 Fimbria A protein VF
LL668_RS20415 (LL668_20450) 41716..42252 + 537 WP_110592981.1 PAP fimbrial minor pilin protein VF
LL668_RS20420 (LL668_20455) 42353..45022 + 2670 WP_272518412.1 Outer membrane usher protein PapC VF
LL668_RS20425 (LL668_20460) 45141..45851 + 711 WP_228367821.1 putative fimbrial chaperone YfcS VF
LL668_RS20430 (LL668_20465) 45899..46507 + 609 WP_228367794.1 fimbrial protein -
LL668_RS20435 (LL668_20470) 46517..47053 + 537 WP_228367795.1 fimbrial protein -
LL668_RS20440 (LL668_20475) 47069..47566 + 498 WP_166685613.1 fimbrial protein -
LL668_RS20445 (LL668_20480) 47577..48089 + 513 WP_282564864.1 fimbrial protein -
LL668_RS20450 (LL668_20485) 48071..48652 + 582 WP_282564865.1 fimbrial protein -
LL668_RS20455 (LL668_20490) 48619..49161 + 543 WP_228367797.1 Protein PrsK VF
LL668_RS20460 (LL668_20495) 49499..50434 + 936 WP_282564866.1 hypothetical protein -
LL668_RS20465 (LL668_20500) 51251..51571 - 321 WP_282564867.1 hypothetical protein -
LL668_RS20470 (LL668_20510) 51937..52452 - 516 WP_267081386.1 fimbrial protein -
LL668_RS20475 (LL668_20515) 53391..53678 + 288 WP_198642025.1 helix-turn-helix transcriptional regulator -
LL668_RS20480 (LL668_20520) 54026..57235 - 3210 WP_228367800.1 Sensor histidine kinase RcsC VF
LL668_RS20485 (LL668_20525) 57699..58685 + 987 WP_228367801.1 DUF523 and DUF1722 domain-containing protein -
LL668_RS20490 (LL668_20530) 59116..59505 - 390 WP_228367802.1 DUF1090 domain-containing protein -
LL668_RS20495 (LL668_20535) 60093..60806 - 714 WP_228367803.1 molecular chaperone -
LL668_RS20500 (LL668_20540) 60788..62119 - 1332 WP_282564868.1 fimbrial protein -
LL668_RS20505 (LL668_20545) 62132..64627 - 2496 WP_228367805.1 Outer membrane usher protein FimD VF
LL668_RS20510 (LL668_20550) 64639..65277 - 639 WP_267081384.1 molecular chaperone -
LL668_RS20515 (LL668_20555) 65418..65954 - 537 WP_228367806.1 Major fimbrial subunit SMF-1 VF
LL668_RS20520 (LL668_20560) 66833..67129 + 297 WP_228367807.1 helix-turn-helix transcriptional regulator -
LL668_RS20525 (LL668_20565) 67635..67796 - 162 Protein_62 transposase -
LL668_RS20530 (LL668_20570) 67841..67996 + 156 WP_282564869.1 hypothetical protein -
LL668_RS20535 (LL668_20575) 68134..68619 - 486 WP_228367809.1 hypothetical protein -
LL668_RS20540 (LL668_20580) 68647..69419 - 773 Protein_65 IS4 family transposase -
LL668_RS20545 (LL668_20585) 69796..72843 + 3048 WP_228367810.1 formate dehydrogenase-N subunit alpha -
LL668_RS20550 (LL668_20590) 72853..73698 + 846 Protein_67 formate dehydrogenase subunit beta -
LL668_RS20555 (LL668_20595) 73788..74429 + 642 WP_228367824.1 formate dehydrogenase cytochrome b556 subunit -
LL668_RS20560 (LL668_20600) 74942..76111 + 1170 WP_228367812.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
LL668_RS20565 (LL668_20605) 76345..77991 + 1647 WP_228367813.1 alkaline phosphatase -
LL668_RS20570 (LL668_20610) 78387..78761 - 375 WP_282564870.1 hypothetical protein -
LL668_RS20575 (LL668_20615) 78793..79485 - 693 WP_282564871.1 fimbrial protein -
LL668_RS20580 (LL668_20620) 79496..80029 - 534 WP_228367815.1 fimbrial protein -
LL668_RS20585 (LL668_20625) 80042..80965 - 924 WP_228367816.1 fimbrial protein -
LL668_RS20590 (LL668_20630) 80976..81731 - 756 WP_282564872.1 Chaperone protein FaeE VF
LL668_RS20595 (LL668_20635) 81724..84099 - 2376 WP_228367818.1 putative outer membrane usher protein ElfC VF
LL668_RS20600 (LL668_20640) 84297..84815 - 519 WP_198642016.1 hypothetical protein VF
LL668_RS20605 (LL668_20645) 84888..85148 - 261 WP_198642015.1 helix-turn-helix transcriptional regulator -
LL668_RS20610 (LL668_20650) 86445..86591 + 147 WP_181420530.1 hypothetical protein -
LL668_RS20615 (LL668_20655) 86581..87174 + 594 WP_198642014.1 Fic family protein -
LL668_RS20620 (LL668_20660) 87739..88464 + 726 WP_110592995.1 tyrosine-type recombinase/integrase -
LL668_RS20625 (LL668_20665) 88896..90113 + 1218 WP_110592996.1 Plasmid partition protein A VF
LL668_RS20630 (LL668_20670) 90103..91086 + 984 WP_222960870.1 ParB family protein -
LL668_RS20635 (LL668_20675) 91325..92263 + 939 WP_228367708.1 hypothetical protein -
LL668_RS20640 (LL668_20680) 92905..93104 + 200 Protein_85 resolvase -
LL668_RS20645 (LL668_20685) 93411..94436 - 1026 WP_228367709.1 hypothetical protein -
LL668_RS20650 (LL668_20690) 94564..96069 - 1506 WP_228367710.1 basic amino acid/polyamine antiporter -
LL668_RS20655 (LL668_20695) 96140..98506 - 2367 WP_228367711.1 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein -
LL668_RS20660 (LL668_20700) 98578..100038 - 1461 WP_228367712.1 basic amino acid/polyamine antiporter -
LL668_RS20665 (LL668_20705) 101840..102364 + 525 WP_228367713.1 type 1 fimbrial protein -
LL668_RS20670 (LL668_20710) 102430..103161 + 732 WP_228367714.1 putative fimbrial chaperone protein ElfD VF
LL668_RS20675 (LL668_20715) 103194..103787 + 594 WP_228367715.1 fimbrial protein -
LL668_RS20680 (LL668_20720) 103806..104399 + 594 WP_228367716.1 fimbrial-like protein -
LL668_RS20685 (LL668_20725) 104414..105151 + 738 WP_228367717.1 putative fimbrial chaperone YraI VF
LL668_RS20690 (LL668_20730) 105144..105893 + 750 WP_228367718.1 molecular chaperone -
LL668_RS20695 (LL668_20735) 105950..108544 + 2595 WP_228367719.1 Outer membrane usher protein YraJ VF
LL668_RS20700 (LL668_20740) 108592..109662 + 1071 WP_228367720.1 hypothetical protein -
LL668_RS20705 (LL668_20745) 110216..110797 + 582 WP_228367721.1 histidine phosphatase family protein -
LL668_RS21200 110825..110911 + 87 Protein_99 IS6 family transposase -
LL668_RS20715 (LL668_20755) 111195..111872 - 678 WP_228367722.1 putative fimbrial chaperone EcpE VF
LL668_RS20720 (LL668_20760) 111938..113545 - 1608 WP_228367723.1 Fimbria adhesin EcpD VF
LL668_RS20725 (LL668_20765) 113558..116053 - 2496 WP_228367724.1 putative outer membrane usher protein EcpC VF
LL668_RS20730 (LL668_20770) 116073..116756 - 684 WP_228367725.1 putative fimbrial chaperone EcpB VF
LL668_RS20735 (LL668_20775) 116844..117458 - 615 WP_228367726.1 Common pilus major fimbrillin subunit EcpA VF
LL668_RS20740 (LL668_20780) 117582..117836 - 255 WP_222960784.1 helix-turn-helix transcriptional regulator -
LL668_RS20745 (LL668_20785) 119603..119950 + 348 WP_282564846.1 helix-turn-helix transcriptional regulator -
LL668_RS20750 (LL668_20790) 120537..120989 + 453 WP_282564847.1 hypothetical protein -
LL668_RS20755 (LL668_20795) 121311..121463 - 153 WP_228367729.1 hypothetical protein -
LL668_RS20760 (LL668_20800) 121542..121793 - 252 WP_228367825.1 helix-turn-helix domain-containing protein -
LL668_RS20765 (LL668_20805) 121886..122621 - 736 Protein_110 IS6 family transposase -
LL668_RS20770 (LL668_20810) 123125..124147 - 1023 WP_228367730.1 ParB family protein -
LL668_RS20775 (LL668_20815) 124153..125397 - 1245 WP_228367731.1 ParA family protein -
LL668_RS20780 (LL668_20820) 126428..126853 - 426 WP_228367732.1 glutaredoxin-dependent arsenate reductase -
LL668_RS20785 (LL668_20825) 126866..128155 - 1290 WP_228367733.1 arsenic transporter -
LL668_RS20790 (LL668_20830) 128200..128520 - 321 WP_004911727.1 transcriptional regulator -
LL668_RS20795 (LL668_20835) 128606..129304 + 699 WP_228367734.1 arsenical resistance protein ArsH -
LL668_RS20800 (LL668_20840) 129690..129920 + 231 WP_228367735.1 hypothetical protein -
LL668_RS20805 (LL668_20845) 130410..130655 + 246 WP_282564848.1 DUF6290 family protein Antitoxin Detail
LL668_RS20810 (LL668_20850) 130642..130917 + 276 WP_196719255.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
LL668_RS20815 (LL668_20855) 131964..132617 - 654 WP_228367736.1 nitroreductase family protein -
LL668_RS21205 132919..133065 + 147 WP_282564849.1 hypothetical protein -
LL668_RS21095 133067..133189 - 123 WP_267081383.1 hypothetical protein -
LL668_RS20820 (LL668_20860) 133774..134064 + 291 WP_228367737.1 hypothetical protein -
LL668_RS20825 (LL668_20865) 134127..136127 + 2001 WP_228367738.1 ParB/RepB/Spo0J family partition protein -
LL668_RS20830 (LL668_20870) 136171..136893 + 723 WP_228367739.1 plasmid SOS inhibition protein A -
LL668_RS20835 (LL668_20875) 136907..137173 + 267 WP_094962792.1 hypothetical protein -
LL668_RS21210 137247..137426 + 180 WP_282564850.1 hypothetical protein -
LL668_RS20840 (LL668_20880) 138145..138396 + 252 WP_228367740.1 hypothetical protein -
LL668_RS20845 (LL668_20885) 138493..138873 + 381 WP_282564851.1 hypothetical protein -
LL668_RS20850 (LL668_20890) 138924..139166 + 243 WP_228367742.1 hypothetical protein -
LL668_RS20855 (LL668_20895) 139219..140028 + 810 WP_228367743.1 N-6 DNA methylase -
LL668_RS20860 (LL668_20900) 140492..140971 + 480 WP_228367744.1 antirestriction protein -
LL668_RS20865 (LL668_20905) 141048..141836 + 789 WP_228367745.1 hypothetical protein -
LL668_RS20870 (LL668_20910) 142026..142472 - 447 Protein_134 hypothetical protein VF
LL668_RS20875 (LL668_20915) 142932..143321 + 390 WP_228367746.1 relaxosome protein TraM -
LL668_RS20880 (LL668_20920) 143568..144239 + 672 WP_228367747.1 LuxR C-terminal-related transcriptional regulator -
LL668_RS20885 (LL668_20925) 144319..144510 + 192 WP_228367748.1 TraY domain-containing protein -
LL668_RS20890 (LL668_20930) 144775..145149 + 375 WP_228367749.1 type IV conjugative transfer system pilin TraA -
LL668_RS20895 (LL668_20935) 145182..145487 + 306 WP_228367750.1 type IV conjugative transfer system protein TraL -
LL668_RS20900 (LL668_20940) 145500..146072 + 573 WP_094962780.1 type IV conjugative transfer system protein TraE -
LL668_RS20905 (LL668_20945) 146053..146823 + 771 WP_228367751.1 type-F conjugative transfer system secretin TraK -
LL668_RS20910 (LL668_20950) 146816..148192 + 1377 WP_228367752.1 F-type conjugal transfer pilus assembly protein TraB -
LL668_RS20920 (LL668_20960) 148448..148939 + 492 WP_228367753.1 transcription/translation regulatory transformer protein RfaH -
LL668_RS20925 (LL668_20965) 148954..149343 + 390 WP_228367754.1 hypothetical protein -
LL668_RS20930 (LL668_20970) 149353..149709 + 357 WP_228367755.1 hypothetical protein -
LL668_RS20935 (LL668_20975) 149923..150162 + 240 WP_228367756.1 hypothetical protein -
LL668_RS20940 (LL668_20980) 150171..150404 + 234 WP_228367757.1 hypothetical protein -
LL668_RS20945 (LL668_20985) 150486..150860 + 375 WP_282564852.1 hypothetical protein -
LL668_RS20950 (LL668_20990) 150841..151329 + 489 WP_282564853.1 hypothetical protein -
LL668_RS20955 (LL668_20995) 151329..151520 + 192 WP_282564854.1 hypothetical protein -
LL668_RS20960 (LL668_21000) 151541..152233 + 693 WP_228367760.1 GNAT family N-acetyltransferase -
LL668_RS20965 (LL668_21005) 152323..152931 + 609 WP_228367761.1 GNAT family N-acetyltransferase -
LL668_RS20970 (LL668_21010) 153037..153360 + 324 WP_123382824.1 hypothetical protein -
LL668_RS20980 (LL668_21020) 153999..156692 + 2694 WP_282564855.1 type IV secretion system protein TraC -
LL668_RS20985 (LL668_21025) 156668..157093 + 426 WP_228367763.1 type-F conjugative transfer system protein TrbI -
LL668_RS20990 (LL668_21030) 157104..157784 + 681 WP_282564856.1 type-F conjugative transfer system protein TraW -
LL668_RS20995 (LL668_21035) 157733..158728 + 996 WP_123382828.1 conjugal transfer pilus assembly protein TraU -
LL668_RS21000 (LL668_21040) 158744..159361 + 618 WP_228367765.1 type-F conjugative transfer system pilin assembly protein TrbC -
LL668_RS21005 (LL668_21045) 159361..161424 + 2064 WP_282564857.1 conjugal transfer protein TraN -
LL668_RS21010 (LL668_21050) 161340..161990 + 651 Protein_160 type-F conjugative transfer system pilin assembly protein TraF -
LL668_RS21015 (LL668_21055) 161992..162360 + 369 WP_282564858.1 hypothetical protein -
LL668_RS21020 (LL668_21060) 162279..162818 + 540 WP_228367768.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
LL668_RS21030 (LL668_21070) 163166..163561 + 396 WP_228367770.1 hypothetical protein -
LL668_RS21035 (LL668_21075) 163757..165106 + 1350 Protein_164 conjugal transfer pilus assembly protein TraH -
LL668_RS21040 (LL668_21080) 165154..168027 + 2874 WP_228367772.1 conjugal transfer mating-pair stabilization protein TraG -
LL668_RS21045 (LL668_21085) 168041..168583 + 543 WP_228367773.1 hypothetical protein -
LL668_RS21050 (LL668_21090) 168890..169210 + 321 WP_228367774.1 hypothetical protein -
LL668_RS21055 (LL668_21095) 169349..169432 + 84 WP_267081385.1 hypothetical protein -
LL668_RS21060 (LL668_21100) 169489..169881 + 393 WP_228367775.1 hypothetical protein -
LL668_RS21100 170017..171140 + 1124 Protein_170 type IV secretion system DNA-binding domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance