MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 171394 bp
Accession: NZ_CP086258 Location: 1..171394 Organism: Providencia rettgeri strain KM4 Replicon: plasmid unnamed
Accession: NZ_CP086258 Location: 1..171394 Organism: Providencia rettgeri strain KM4 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LL668_RS20220 (LL668_20255) | 389..1384 | + | 996 | WP_123382828.1 | conjugal transfer pilus assembly protein TraU | - |
LL668_RS20225 (LL668_20260) | 1400..2017 | + | 618 | WP_228367765.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
LL668_RS20230 (LL668_20265) | 2017..4080 | + | 2064 | WP_282564857.1 | conjugal transfer protein TraN | - |
LL668_RS20235 (LL668_20270) | 3996..4646 | + | 651 | Protein_4 | type-F conjugative transfer system pilin assembly protein TraF | - |
LL668_RS20240 (LL668_20275) | 4648..5016 | + | 369 | WP_282564858.1 | hypothetical protein | - |
LL668_RS20245 (LL668_20280) | 4935..5474 | + | 540 | WP_228367768.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
LL668_RS20255 (LL668_20290) | 5822..6217 | + | 396 | WP_228367770.1 | hypothetical protein | - |
LL668_RS20260 (LL668_20295) | 6413..7762 | + | 1350 | Protein_8 | conjugal transfer pilus assembly protein TraH | - |
LL668_RS20265 (LL668_20300) | 7810..10683 | + | 2874 | WP_228367772.1 | conjugal transfer mating-pair stabilization protein TraG | - |
LL668_RS20270 (LL668_20305) | 10697..11239 | + | 543 | WP_228367773.1 | hypothetical protein | - |
LL668_RS20275 (LL668_20310) | 11220..11867 | + | 648 | WP_228367779.1 | hypothetical protein | - |
LL668_RS20280 (LL668_20315) | 12006..12089 | + | 84 | WP_267081385.1 | hypothetical protein | - |
LL668_RS20285 (LL668_20320) | 12146..12538 | + | 393 | WP_228367775.1 | hypothetical protein | - |
LL668_RS20290 (LL668_20325) | 12611..14953 | + | 2343 | WP_282564860.1 | type IV conjugative transfer system coupling protein TraD | - |
LL668_RS20295 (LL668_20330) | 14848..19956 | + | 5109 | WP_282564873.1 | Multifunctional conjugation protein TraI | Relaxase |
LL668_RS20300 (LL668_20335) | 20368..21306 | + | 939 | WP_228367782.1 | RepA family replication protein | - |
LL668_RS20305 (LL668_20340) | 22012..22632 | + | 621 | WP_282564861.1 | ProQ/FINO family protein | - |
LL668_RS20310 (LL668_20345) | 22578..23195 | + | 618 | Protein_18 | DUF2913 family protein | - |
LL668_RS20315 (LL668_20350) | 23444..24379 | + | 936 | WP_110592970.1 | Recombination-promoting nuclease RpnA | VF |
LL668_RS20320 (LL668_20355) | 24387..24563 | - | 177 | WP_272526671.1 | hypothetical protein | - |
LL668_RS20325 (LL668_20360) | 24856..25126 | - | 271 | Protein_21 | hypothetical protein | - |
LL668_RS20330 (LL668_20365) | 25108..25407 | - | 300 | Protein_22 | helix-turn-helix domain-containing protein | - |
LL668_RS20335 (LL668_20370) | 25524..25764 | - | 241 | Protein_23 | resolvase | - |
LL668_RS20340 (LL668_20375) | 26019..26231 | + | 213 | WP_110592971.1 | cold-shock protein | - |
LL668_RS21090 | 26244..26360 | + | 117 | WP_232799088.1 | hypothetical protein | - |
LL668_RS20350 (LL668_20385) | 27100..27279 | - | 180 | WP_228367785.1 | hypothetical protein | - |
LL668_RS20355 (LL668_20390) | 27799..28725 | - | 927 | WP_228367786.1 | Lipid A biosynthesis palmitoleoyltransferase | VF |
LL668_RS20360 (LL668_20395) | 28881..29495 | + | 615 | Protein_28 | IS6 family transposase | - |
LL668_RS20365 (LL668_20400) | 29517..29609 | - | 93 | Protein_29 | IS6 family transposase | - |
LL668_RS20370 (LL668_20405) | 29702..30043 | - | 342 | WP_282564862.1 | hypothetical protein | - |
LL668_RS21195 | 30307..30465 | + | 159 | Protein_31 | recombinase family protein | - |
LL668_RS20375 (LL668_20410) | 30566..31900 | - | 1335 | WP_228367788.1 | DUF1343 domain-containing protein | - |
LL668_RS20380 (LL668_20415) | 31943..33031 | - | 1089 | WP_228367789.1 | hypothetical protein | - |
LL668_RS20385 (LL668_20420) | 33063..34931 | - | 1869 | WP_228367790.1 | glycoside hydrolase family 3 protein | - |
LL668_RS20390 (LL668_20425) | 35389..36649 | - | 1261 | Protein_35 | IS3 family transposase | - |
LL668_RS20395 (LL668_20430) | 38116..38541 | + | 426 | WP_282564863.1 | helix-turn-helix transcriptional regulator | - |
LL668_RS20400 (LL668_20435) | 38893..39210 | - | 318 | WP_282559922.1 | helix-turn-helix transcriptional regulator | - |
LL668_RS20405 (LL668_20440) | 40695..41036 | + | 342 | WP_228367792.1 | helix-turn-helix transcriptional regulator | - |
LL668_RS20410 (LL668_20445) | 41109..41639 | + | 531 | WP_228367793.1 | Fimbria A protein | VF |
LL668_RS20415 (LL668_20450) | 41716..42252 | + | 537 | WP_110592981.1 | PAP fimbrial minor pilin protein | VF |
LL668_RS20420 (LL668_20455) | 42353..45022 | + | 2670 | WP_272518412.1 | Outer membrane usher protein PapC | VF |
LL668_RS20425 (LL668_20460) | 45141..45851 | + | 711 | WP_228367821.1 | putative fimbrial chaperone YfcS | VF |
LL668_RS20430 (LL668_20465) | 45899..46507 | + | 609 | WP_228367794.1 | fimbrial protein | - |
LL668_RS20435 (LL668_20470) | 46517..47053 | + | 537 | WP_228367795.1 | fimbrial protein | - |
LL668_RS20440 (LL668_20475) | 47069..47566 | + | 498 | WP_166685613.1 | fimbrial protein | - |
LL668_RS20445 (LL668_20480) | 47577..48089 | + | 513 | WP_282564864.1 | fimbrial protein | - |
LL668_RS20450 (LL668_20485) | 48071..48652 | + | 582 | WP_282564865.1 | fimbrial protein | - |
LL668_RS20455 (LL668_20490) | 48619..49161 | + | 543 | WP_228367797.1 | Protein PrsK | VF |
LL668_RS20460 (LL668_20495) | 49499..50434 | + | 936 | WP_282564866.1 | hypothetical protein | - |
LL668_RS20465 (LL668_20500) | 51251..51571 | - | 321 | WP_282564867.1 | hypothetical protein | - |
LL668_RS20470 (LL668_20510) | 51937..52452 | - | 516 | WP_267081386.1 | fimbrial protein | - |
LL668_RS20475 (LL668_20515) | 53391..53678 | + | 288 | WP_198642025.1 | helix-turn-helix transcriptional regulator | - |
LL668_RS20480 (LL668_20520) | 54026..57235 | - | 3210 | WP_228367800.1 | Sensor histidine kinase RcsC | VF |
LL668_RS20485 (LL668_20525) | 57699..58685 | + | 987 | WP_228367801.1 | DUF523 and DUF1722 domain-containing protein | - |
LL668_RS20490 (LL668_20530) | 59116..59505 | - | 390 | WP_228367802.1 | DUF1090 domain-containing protein | - |
LL668_RS20495 (LL668_20535) | 60093..60806 | - | 714 | WP_228367803.1 | molecular chaperone | - |
LL668_RS20500 (LL668_20540) | 60788..62119 | - | 1332 | WP_282564868.1 | fimbrial protein | - |
LL668_RS20505 (LL668_20545) | 62132..64627 | - | 2496 | WP_228367805.1 | Outer membrane usher protein FimD | VF |
LL668_RS20510 (LL668_20550) | 64639..65277 | - | 639 | WP_267081384.1 | molecular chaperone | - |
LL668_RS20515 (LL668_20555) | 65418..65954 | - | 537 | WP_228367806.1 | Major fimbrial subunit SMF-1 | VF |
LL668_RS20520 (LL668_20560) | 66833..67129 | + | 297 | WP_228367807.1 | helix-turn-helix transcriptional regulator | - |
LL668_RS20525 (LL668_20565) | 67635..67796 | - | 162 | Protein_62 | transposase | - |
LL668_RS20530 (LL668_20570) | 67841..67996 | + | 156 | WP_282564869.1 | hypothetical protein | - |
LL668_RS20535 (LL668_20575) | 68134..68619 | - | 486 | WP_228367809.1 | hypothetical protein | - |
LL668_RS20540 (LL668_20580) | 68647..69419 | - | 773 | Protein_65 | IS4 family transposase | - |
LL668_RS20545 (LL668_20585) | 69796..72843 | + | 3048 | WP_228367810.1 | formate dehydrogenase-N subunit alpha | - |
LL668_RS20550 (LL668_20590) | 72853..73698 | + | 846 | Protein_67 | formate dehydrogenase subunit beta | - |
LL668_RS20555 (LL668_20595) | 73788..74429 | + | 642 | WP_228367824.1 | formate dehydrogenase cytochrome b556 subunit | - |
LL668_RS20560 (LL668_20600) | 74942..76111 | + | 1170 | WP_228367812.1 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase | - |
LL668_RS20565 (LL668_20605) | 76345..77991 | + | 1647 | WP_228367813.1 | alkaline phosphatase | - |
LL668_RS20570 (LL668_20610) | 78387..78761 | - | 375 | WP_282564870.1 | hypothetical protein | - |
LL668_RS20575 (LL668_20615) | 78793..79485 | - | 693 | WP_282564871.1 | fimbrial protein | - |
LL668_RS20580 (LL668_20620) | 79496..80029 | - | 534 | WP_228367815.1 | fimbrial protein | - |
LL668_RS20585 (LL668_20625) | 80042..80965 | - | 924 | WP_228367816.1 | fimbrial protein | - |
LL668_RS20590 (LL668_20630) | 80976..81731 | - | 756 | WP_282564872.1 | Chaperone protein FaeE | VF |
LL668_RS20595 (LL668_20635) | 81724..84099 | - | 2376 | WP_228367818.1 | putative outer membrane usher protein ElfC | VF |
LL668_RS20600 (LL668_20640) | 84297..84815 | - | 519 | WP_198642016.1 | hypothetical protein | VF |
LL668_RS20605 (LL668_20645) | 84888..85148 | - | 261 | WP_198642015.1 | helix-turn-helix transcriptional regulator | - |
LL668_RS20610 (LL668_20650) | 86445..86591 | + | 147 | WP_181420530.1 | hypothetical protein | - |
LL668_RS20615 (LL668_20655) | 86581..87174 | + | 594 | WP_198642014.1 | Fic family protein | - |
LL668_RS20620 (LL668_20660) | 87739..88464 | + | 726 | WP_110592995.1 | tyrosine-type recombinase/integrase | - |
LL668_RS20625 (LL668_20665) | 88896..90113 | + | 1218 | WP_110592996.1 | Plasmid partition protein A | VF |
LL668_RS20630 (LL668_20670) | 90103..91086 | + | 984 | WP_222960870.1 | ParB family protein | - |
LL668_RS20635 (LL668_20675) | 91325..92263 | + | 939 | WP_228367708.1 | hypothetical protein | - |
LL668_RS20640 (LL668_20680) | 92905..93104 | + | 200 | Protein_85 | resolvase | - |
LL668_RS20645 (LL668_20685) | 93411..94436 | - | 1026 | WP_228367709.1 | hypothetical protein | - |
LL668_RS20650 (LL668_20690) | 94564..96069 | - | 1506 | WP_228367710.1 | basic amino acid/polyamine antiporter | - |
LL668_RS20655 (LL668_20695) | 96140..98506 | - | 2367 | WP_228367711.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
LL668_RS20660 (LL668_20700) | 98578..100038 | - | 1461 | WP_228367712.1 | basic amino acid/polyamine antiporter | - |
LL668_RS20665 (LL668_20705) | 101840..102364 | + | 525 | WP_228367713.1 | type 1 fimbrial protein | - |
LL668_RS20670 (LL668_20710) | 102430..103161 | + | 732 | WP_228367714.1 | putative fimbrial chaperone protein ElfD | VF |
LL668_RS20675 (LL668_20715) | 103194..103787 | + | 594 | WP_228367715.1 | fimbrial protein | - |
LL668_RS20680 (LL668_20720) | 103806..104399 | + | 594 | WP_228367716.1 | fimbrial-like protein | - |
LL668_RS20685 (LL668_20725) | 104414..105151 | + | 738 | WP_228367717.1 | putative fimbrial chaperone YraI | VF |
LL668_RS20690 (LL668_20730) | 105144..105893 | + | 750 | WP_228367718.1 | molecular chaperone | - |
LL668_RS20695 (LL668_20735) | 105950..108544 | + | 2595 | WP_228367719.1 | Outer membrane usher protein YraJ | VF |
LL668_RS20700 (LL668_20740) | 108592..109662 | + | 1071 | WP_228367720.1 | hypothetical protein | - |
LL668_RS20705 (LL668_20745) | 110216..110797 | + | 582 | WP_228367721.1 | histidine phosphatase family protein | - |
LL668_RS21200 | 110825..110911 | + | 87 | Protein_99 | IS6 family transposase | - |
LL668_RS20715 (LL668_20755) | 111195..111872 | - | 678 | WP_228367722.1 | putative fimbrial chaperone EcpE | VF |
LL668_RS20720 (LL668_20760) | 111938..113545 | - | 1608 | WP_228367723.1 | Fimbria adhesin EcpD | VF |
LL668_RS20725 (LL668_20765) | 113558..116053 | - | 2496 | WP_228367724.1 | putative outer membrane usher protein EcpC | VF |
LL668_RS20730 (LL668_20770) | 116073..116756 | - | 684 | WP_228367725.1 | putative fimbrial chaperone EcpB | VF |
LL668_RS20735 (LL668_20775) | 116844..117458 | - | 615 | WP_228367726.1 | Common pilus major fimbrillin subunit EcpA | VF |
LL668_RS20740 (LL668_20780) | 117582..117836 | - | 255 | WP_222960784.1 | helix-turn-helix transcriptional regulator | - |
LL668_RS20745 (LL668_20785) | 119603..119950 | + | 348 | WP_282564846.1 | helix-turn-helix transcriptional regulator | - |
LL668_RS20750 (LL668_20790) | 120537..120989 | + | 453 | WP_282564847.1 | hypothetical protein | - |
LL668_RS20755 (LL668_20795) | 121311..121463 | - | 153 | WP_228367729.1 | hypothetical protein | - |
LL668_RS20760 (LL668_20800) | 121542..121793 | - | 252 | WP_228367825.1 | helix-turn-helix domain-containing protein | - |
LL668_RS20765 (LL668_20805) | 121886..122621 | - | 736 | Protein_110 | IS6 family transposase | - |
LL668_RS20770 (LL668_20810) | 123125..124147 | - | 1023 | WP_228367730.1 | ParB family protein | - |
LL668_RS20775 (LL668_20815) | 124153..125397 | - | 1245 | WP_228367731.1 | ParA family protein | - |
LL668_RS20780 (LL668_20820) | 126428..126853 | - | 426 | WP_228367732.1 | glutaredoxin-dependent arsenate reductase | - |
LL668_RS20785 (LL668_20825) | 126866..128155 | - | 1290 | WP_228367733.1 | arsenic transporter | - |
LL668_RS20790 (LL668_20830) | 128200..128520 | - | 321 | WP_004911727.1 | transcriptional regulator | - |
LL668_RS20795 (LL668_20835) | 128606..129304 | + | 699 | WP_228367734.1 | arsenical resistance protein ArsH | - |
LL668_RS20800 (LL668_20840) | 129690..129920 | + | 231 | WP_228367735.1 | hypothetical protein | - |
LL668_RS20805 (LL668_20845) | 130410..130655 | + | 246 | WP_282564848.1 | DUF6290 family protein | Antitoxin Detail |
LL668_RS20810 (LL668_20850) | 130642..130917 | + | 276 | WP_196719255.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
LL668_RS20815 (LL668_20855) | 131964..132617 | - | 654 | WP_228367736.1 | nitroreductase family protein | - |
LL668_RS21205 | 132919..133065 | + | 147 | WP_282564849.1 | hypothetical protein | - |
LL668_RS21095 | 133067..133189 | - | 123 | WP_267081383.1 | hypothetical protein | - |
LL668_RS20820 (LL668_20860) | 133774..134064 | + | 291 | WP_228367737.1 | hypothetical protein | - |
LL668_RS20825 (LL668_20865) | 134127..136127 | + | 2001 | WP_228367738.1 | ParB/RepB/Spo0J family partition protein | - |
LL668_RS20830 (LL668_20870) | 136171..136893 | + | 723 | WP_228367739.1 | plasmid SOS inhibition protein A | - |
LL668_RS20835 (LL668_20875) | 136907..137173 | + | 267 | WP_094962792.1 | hypothetical protein | - |
LL668_RS21210 | 137247..137426 | + | 180 | WP_282564850.1 | hypothetical protein | - |
LL668_RS20840 (LL668_20880) | 138145..138396 | + | 252 | WP_228367740.1 | hypothetical protein | - |
LL668_RS20845 (LL668_20885) | 138493..138873 | + | 381 | WP_282564851.1 | hypothetical protein | - |
LL668_RS20850 (LL668_20890) | 138924..139166 | + | 243 | WP_228367742.1 | hypothetical protein | - |
LL668_RS20855 (LL668_20895) | 139219..140028 | + | 810 | WP_228367743.1 | N-6 DNA methylase | - |
LL668_RS20860 (LL668_20900) | 140492..140971 | + | 480 | WP_228367744.1 | antirestriction protein | - |
LL668_RS20865 (LL668_20905) | 141048..141836 | + | 789 | WP_228367745.1 | hypothetical protein | - |
LL668_RS20870 (LL668_20910) | 142026..142472 | - | 447 | Protein_134 | hypothetical protein | VF |
LL668_RS20875 (LL668_20915) | 142932..143321 | + | 390 | WP_228367746.1 | relaxosome protein TraM | - |
LL668_RS20880 (LL668_20920) | 143568..144239 | + | 672 | WP_228367747.1 | LuxR C-terminal-related transcriptional regulator | - |
LL668_RS20885 (LL668_20925) | 144319..144510 | + | 192 | WP_228367748.1 | TraY domain-containing protein | - |
LL668_RS20890 (LL668_20930) | 144775..145149 | + | 375 | WP_228367749.1 | type IV conjugative transfer system pilin TraA | - |
LL668_RS20895 (LL668_20935) | 145182..145487 | + | 306 | WP_228367750.1 | type IV conjugative transfer system protein TraL | - |
LL668_RS20900 (LL668_20940) | 145500..146072 | + | 573 | WP_094962780.1 | type IV conjugative transfer system protein TraE | - |
LL668_RS20905 (LL668_20945) | 146053..146823 | + | 771 | WP_228367751.1 | type-F conjugative transfer system secretin TraK | - |
LL668_RS20910 (LL668_20950) | 146816..148192 | + | 1377 | WP_228367752.1 | F-type conjugal transfer pilus assembly protein TraB | - |
LL668_RS20920 (LL668_20960) | 148448..148939 | + | 492 | WP_228367753.1 | transcription/translation regulatory transformer protein RfaH | - |
LL668_RS20925 (LL668_20965) | 148954..149343 | + | 390 | WP_228367754.1 | hypothetical protein | - |
LL668_RS20930 (LL668_20970) | 149353..149709 | + | 357 | WP_228367755.1 | hypothetical protein | - |
LL668_RS20935 (LL668_20975) | 149923..150162 | + | 240 | WP_228367756.1 | hypothetical protein | - |
LL668_RS20940 (LL668_20980) | 150171..150404 | + | 234 | WP_228367757.1 | hypothetical protein | - |
LL668_RS20945 (LL668_20985) | 150486..150860 | + | 375 | WP_282564852.1 | hypothetical protein | - |
LL668_RS20950 (LL668_20990) | 150841..151329 | + | 489 | WP_282564853.1 | hypothetical protein | - |
LL668_RS20955 (LL668_20995) | 151329..151520 | + | 192 | WP_282564854.1 | hypothetical protein | - |
LL668_RS20960 (LL668_21000) | 151541..152233 | + | 693 | WP_228367760.1 | GNAT family N-acetyltransferase | - |
LL668_RS20965 (LL668_21005) | 152323..152931 | + | 609 | WP_228367761.1 | GNAT family N-acetyltransferase | - |
LL668_RS20970 (LL668_21010) | 153037..153360 | + | 324 | WP_123382824.1 | hypothetical protein | - |
LL668_RS20980 (LL668_21020) | 153999..156692 | + | 2694 | WP_282564855.1 | type IV secretion system protein TraC | - |
LL668_RS20985 (LL668_21025) | 156668..157093 | + | 426 | WP_228367763.1 | type-F conjugative transfer system protein TrbI | - |
LL668_RS20990 (LL668_21030) | 157104..157784 | + | 681 | WP_282564856.1 | type-F conjugative transfer system protein TraW | - |
LL668_RS20995 (LL668_21035) | 157733..158728 | + | 996 | WP_123382828.1 | conjugal transfer pilus assembly protein TraU | - |
LL668_RS21000 (LL668_21040) | 158744..159361 | + | 618 | WP_228367765.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
LL668_RS21005 (LL668_21045) | 159361..161424 | + | 2064 | WP_282564857.1 | conjugal transfer protein TraN | - |
LL668_RS21010 (LL668_21050) | 161340..161990 | + | 651 | Protein_160 | type-F conjugative transfer system pilin assembly protein TraF | - |
LL668_RS21015 (LL668_21055) | 161992..162360 | + | 369 | WP_282564858.1 | hypothetical protein | - |
LL668_RS21020 (LL668_21060) | 162279..162818 | + | 540 | WP_228367768.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
LL668_RS21030 (LL668_21070) | 163166..163561 | + | 396 | WP_228367770.1 | hypothetical protein | - |
LL668_RS21035 (LL668_21075) | 163757..165106 | + | 1350 | Protein_164 | conjugal transfer pilus assembly protein TraH | - |
LL668_RS21040 (LL668_21080) | 165154..168027 | + | 2874 | WP_228367772.1 | conjugal transfer mating-pair stabilization protein TraG | - |
LL668_RS21045 (LL668_21085) | 168041..168583 | + | 543 | WP_228367773.1 | hypothetical protein | - |
LL668_RS21050 (LL668_21090) | 168890..169210 | + | 321 | WP_228367774.1 | hypothetical protein | - |
LL668_RS21055 (LL668_21095) | 169349..169432 | + | 84 | WP_267081385.1 | hypothetical protein | - |
LL668_RS21060 (LL668_21100) | 169489..169881 | + | 393 | WP_228367775.1 | hypothetical protein | - |
LL668_RS21100 | 170017..171140 | + | 1124 | Protein_170 | type IV secretion system DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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