MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 68240 bp
Accession: NZ_CP086248 Location: 1..68240 Organism: Clostridium sp. CF011 Replicon: plasmid pCF011-68
Accession: NZ_CP086248 Location: 1..68240 Organism: Clostridium sp. CF011 Replicon: plasmid pCF011-68
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL036_RS18755 (LL036_18690) | 457..1467 | + | 1011 | WP_216304431.1 | replication initiation protein | - |
| LL036_RS18760 (LL036_18695) | 1605..1829 | + | 225 | WP_216304432.1 | DUF1659 domain-containing protein | - |
| LL036_RS18765 (LL036_18700) | 1888..2124 | + | 237 | WP_216304433.1 | DUF2922 domain-containing protein | - |
| LL036_RS18770 (LL036_18705) | 2312..3091 | + | 780 | WP_216304434.1 | N-acetylmuramoyl-L-alanine amidase | - |
| LL036_RS18775 | 3147..3272 | + | 126 | WP_258280793.1 | hypothetical protein | - |
| LL036_RS18780 (LL036_18710) | 3336..3542 | - | 207 | WP_216304435.1 | hypothetical protein | - |
| LL036_RS18785 (LL036_18715) | 4890..5363 | - | 474 | WP_216304436.1 | ASCH domain-containing protein | - |
| LL036_RS18790 (LL036_18720) | 6080..6334 | + | 255 | WP_216304437.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LL036_RS18795 (LL036_18725) | 6327..6584 | + | 258 | WP_216304438.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| LL036_RS18800 (LL036_18730) | 7513..7746 | + | 234 | WP_268064233.1 | RepB family plasmid replication initiator protein | - |
| LL036_RS18805 (LL036_18735) | 8000..9175 | - | 1176 | WP_216304439.1 | replication initiation protein | - |
| LL036_RS18810 (LL036_18740) | 10085..10291 | + | 207 | WP_216304440.1 | hypothetical protein | - |
| LL036_RS18815 (LL036_18745) | 10480..11358 | + | 879 | WP_216304441.1 | CPBP family intramembrane metalloprotease | - |
| LL036_RS18820 (LL036_18750) | 11849..12298 | - | 450 | WP_216304442.1 | hypothetical protein | - |
| LL036_RS18825 (LL036_18755) | 12280..13038 | - | 759 | WP_216304443.1 | hypothetical protein | VF |
| LL036_RS18830 (LL036_18760) | 13035..13202 | - | 168 | WP_216304444.1 | hypothetical protein | - |
| LL036_RS18835 (LL036_18765) | 13448..13855 | + | 408 | WP_253198301.1 | putative ABC transporter ATP-binding protein NosF | VF |
| LL036_RS18840 | 13852..13923 | + | 72 | WP_253198303.1 | ATP-binding cassette domain-containing protein | - |
| LL036_RS18845 | 14098..14220 | + | 123 | WP_258280796.1 | hypothetical protein | - |
| LL036_RS18850 (LL036_18770) | 14349..15791 | + | 1443 | WP_268064188.1 | IS4 family transposase IS231O | Transposase |
| LL036_RS18855 (LL036_18775) | 16296..17015 | + | 720 | WP_216304404.1 | alpha/beta fold hydrolase | - |
| LL036_RS18860 (LL036_18780) | 17510..17821 | + | 312 | WP_216304403.1 | SH3 domain-containing protein | - |
| LL036_RS18865 (LL036_18785) | 18306..18518 | - | 213 | WP_216304401.1 | hypothetical protein | - |
| LL036_RS18870 (LL036_18790) | 18536..18754 | - | 219 | WP_216304400.1 | hypothetical protein | - |
| LL036_RS18875 (LL036_18795) | 18891..19211 | - | 321 | Protein_25 | DNA cytosine methyltransferase | - |
| LL036_RS18880 (LL036_18800) | 19698..20198 | - | 501 | WP_216304398.1 | dihydrofolate reductase | - |
| LL036_RS18885 (LL036_18805) | 20281..20436 | - | 156 | Protein_27 | thymidylate synthase | - |
| LL036_RS18890 (LL036_18810) | 20791..22134 | - | 1344 | WP_216304397.1 | erythromycin esterase family protein | - |
| LL036_RS18895 (LL036_18815) | 22282..22476 | - | 195 | Protein_29 | putative ABC transporter ATP-binding protein YxlF | VF |
| LL036_RS18900 (LL036_18820) | 22540..22680 | + | 141 | Protein_30 | ribosomal protein L7/L12 | - |
| LL036_RS18905 (LL036_18825) | 23998..24573 | - | 576 | Protein_31 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| LL036_RS18910 (LL036_18830) | 24922..25827 | - | 906 | WP_216304395.1 | HAMP domain-containing sensor histidine kinase | - |
| LL036_RS18915 (LL036_18835) | 25848..26645 | - | 798 | WP_216304394.1 | ABC transporter permease | - |
| LL036_RS18920 (LL036_18840) | 26638..27561 | - | 924 | WP_216304393.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| LL036_RS18925 (LL036_18845) | 27653..28333 | - | 681 | WP_216304392.1 | response regulator transcription factor | - |
| LL036_RS18930 (LL036_18850) | 28759..30960 | - | 2202 | WP_216304391.1 | Tn3 family transposase TnBth1 | Transposase |
| LL036_RS18935 (LL036_18855) | 30980..31768 | - | 789 | WP_216304390.1 | Tn3 family transposase TnBth1 | Transposase |
| LL036_RS18940 (LL036_18860) | 32711..33472 | - | 762 | WP_216304627.1 | IS21 family transposase ISSau9 | Transposase |
| LL036_RS18945 (LL036_18865) | 33472..35067 | - | 1596 | WP_216304626.1 | IS21 family transposase ISSau9 | Transposase |
| LL036_RS18950 (LL036_18870) | 35699..35872 | + | 174 | WP_216304531.1 | hypothetical protein | - |
| LL036_RS18955 (LL036_18875) | 36138..36485 | + | 348 | WP_253198309.1 | hypothetical protein | - |
| LL036_RS18960 (LL036_18880) | 37966..38202 | + | 237 | WP_216304532.1 | hypothetical protein | - |
| LL036_RS18965 (LL036_18885) | 38274..38627 | + | 354 | WP_216304533.1 | hypothetical protein | - |
| LL036_RS18970 (LL036_18890) | 38801..39229 | + | 429 | WP_216304534.1 | GNAT family N-acetyltransferase | - |
| LL036_RS18975 (LL036_18895) | 39694..39981 | + | 288 | WP_253198310.1 | hypothetical protein | - |
| LL036_RS18980 (LL036_18900) | 39978..41132 | + | 1155 | WP_253198311.1 | DNA-binding response regulator | - |
| LL036_RS18985 (LL036_18905) | 41221..41478 | - | 258 | WP_216304536.1 | hypothetical protein | - |
| LL036_RS18990 (LL036_18910) | 41816..43066 | + | 1251 | WP_216304538.1 | hypothetical protein | - |
| LL036_RS18995 (LL036_18915) | 43114..43839 | - | 726 | WP_216304539.1 | LytTR family DNA-binding domain-containing protein | - |
| LL036_RS19000 (LL036_18920) | 44098..44247 | + | 150 | WP_216304540.1 | cyclic lactone autoinducer peptide | - |
| LL036_RS19005 (LL036_18925) | 44249..44893 | + | 645 | WP_216304541.1 | accessory gene regulator B family protein | - |
| LL036_RS19010 (LL036_18930) | 44990..46285 | + | 1296 | WP_216304542.1 | GHKL domain-containing protein | - |
| LL036_RS19015 (LL036_18935) | 46560..48020 | + | 1461 | WP_268064015.1 | IS1182 family transposase ISBsp4 | Transposase |
| LL036_RS19020 (LL036_18940) | 48763..49674 | + | 912 | WP_216304607.1 | Daunorubicin/doxorubicin resistance ATP-binding protein DrrA | VF |
| LL036_RS19025 (LL036_18945) | 49675..50409 | + | 735 | WP_216304606.1 | ABC transporter permease | - |
| LL036_RS19030 (LL036_18950) | 50425..51168 | + | 744 | WP_216304605.1 | ABC transporter permease | - |
| LL036_RS19035 (LL036_18955) | 51300..51461 | + | 162 | WP_216304658.1 | lacticin 481 family lantibiotic | - |
| LL036_RS19040 (LL036_18960) | 51534..51695 | + | 162 | WP_216304658.1 | lacticin 481 family lantibiotic | - |
| LL036_RS19045 (LL036_18965) | 51768..51929 | + | 162 | WP_216304658.1 | lacticin 481 family lantibiotic | - |
| LL036_RS19050 (LL036_18970) | 52002..52163 | + | 162 | WP_216304658.1 | lacticin 481 family lantibiotic | - |
| LL036_RS19055 (LL036_18975) | 52236..52397 | + | 162 | WP_216304658.1 | lacticin 481 family lantibiotic | - |
| LL036_RS19060 (LL036_18980) | 52470..52631 | + | 162 | WP_216304658.1 | lacticin 481 family lantibiotic | - |
| LL036_RS19065 (LL036_18985) | 52704..52865 | + | 162 | WP_216304658.1 | lacticin 481 family lantibiotic | - |
| LL036_RS19070 (LL036_18990) | 52938..53099 | + | 162 | WP_216304658.1 | lacticin 481 family lantibiotic | - |
| LL036_RS19075 (LL036_18995) | 53185..56409 | + | 3225 | WP_216304585.1 | type 2 lanthipeptide synthetase LanM family protein | - |
| LL036_RS19080 (LL036_19000) | 56507..58675 | + | 2169 | WP_268064231.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| LL036_RS19085 | 59755..59883 | + | 129 | WP_268064232.1 | hypothetical protein | - |
| LL036_RS19090 (LL036_19005) | 59979..60740 | - | 762 | WP_216304627.1 | IS21 family transposase ISSau9 | Transposase |
| LL036_RS19095 (LL036_19010) | 60740..62335 | - | 1596 | WP_216304626.1 | IS21 family transposase ISSau9 | Transposase |
| LL036_RS19100 (LL036_19015) | 62446..63315 | + | 870 | WP_216304611.1 | Abi family protein | - |
| LL036_RS19105 (LL036_19020) | 63312..63599 | - | 288 | WP_216304610.1 | hypothetical protein | - |
| LL036_RS19110 (LL036_19025) | 63826..64434 | - | 609 | WP_216304609.1 | tyrosine-type recombinase/integrase | - |
| LL036_RS19115 (LL036_19030) | 64871..65425 | + | 555 | WP_253198313.1 | sigma-70 family RNA polymerase sigma factor | - |
| LL036_RS19120 (LL036_19035) | 66294..68129 | + | 1836 | WP_253198314.1 | group II intron reverse transcriptase/maturase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|