MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 38590 bp
Accession: NZ_CP086189 Location: 1..38590 Organism: Xanthomonas oryzae strain PXO79 Replicon: plasmid unnamed1
Accession: NZ_CP086189 Location: 1..38590 Organism: Xanthomonas oryzae strain PXO79 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL930_RS23470 (LL930_23445) | 796..1191 | + | 396 | WP_274393978.1 | conjugal transfer protein TraA | - |
| LL930_RS23475 (LL930_23450) | 1299..1919 | + | 621 | WP_274393979.1 | hypothetical protein | - |
| LL930_RS23480 (LL930_23455) | 2118..2459 | + | 342 | WP_078583841.1 | hypothetical protein | - |
| LL930_RS23485 (LL930_23460) | 2600..4174 | + | 1575 | WP_005917865.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LL930_RS23490 (LL930_23465) | 4188..7127 | + | 2940 | WP_274393980.1 | Multifunctional conjugation protein TraI | Relaxase |
| LL930_RS23495 (LL930_23470) | 7197..7523 | - | 327 | WP_274393981.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LL930_RS23500 (LL930_23475) | 7520..7690 | - | 171 | WP_017157755.1 | antitoxin MazE family protein | Antitoxin Detail |
| LL930_RS23505 (LL930_23480) | 8027..8446 | - | 420 | WP_011052981.1 | hypothetical protein | - |
| LL930_RS23510 (LL930_23485) | 8572..9450 | - | 879 | WP_274393988.1 | Type IV secretion system protein virB1 | VF |
| LL930_RS23515 (LL930_23490) | 9461..10483 | - | 1023 | WP_082340387.1 | Type IV secretion system protein VirB11 | VF |
| LL930_RS23520 (LL930_23495) | 10494..11714 | - | 1221 | WP_274393982.1 | Type IV secretion system protein virB10 | VF |
| LL930_RS23525 (LL930_23500) | 11716..12498 | - | 783 | WP_274393983.1 | Type IV secretion system protein virB9 | VF |
| LL930_RS23530 (LL930_23505) | 12523..13197 | - | 675 | WP_274393984.1 | type IV secretion system protein | - |
| LL930_RS23535 (LL930_23510) | 13194..14060 | - | 867 | WP_274393985.1 | type IV secretion system protein | - |
| LL930_RS23540 (LL930_23515) | 14062..14442 | - | 381 | WP_274393986.1 | hypothetical protein | - |
| LL930_RS23545 (LL930_23520) | 14435..14647 | - | 213 | WP_005931790.1 | hypothetical protein | - |
| LL930_RS23550 (LL930_23525) | 14695..15363 | - | 669 | WP_274393987.1 | type IV secretion system protein | - |
| LL930_RS23555 (LL930_23530) | 15360..17993 | - | 2634 | WP_274393989.1 | Type IV secretion system protein virB4 | VF |
| LL930_RS23560 (LL930_23535) | 18016..18315 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| LL930_RS23565 (LL930_23540) | 18312..18689 | - | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| LL930_RS23570 (LL930_23545) | 18710..19000 | - | 291 | WP_274393990.1 | MobD protein | - |
| LL930_RS23575 (LL930_23550) | 19582..19863 | - | 282 | WP_274393970.1 | hypothetical protein | - |
| LL930_RS23580 (LL930_23555) | 20631..21281 | + | 651 | WP_274393991.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LL930_RS23585 (LL930_23560) | 21492..21944 | + | 453 | WP_274393971.1 | transposase | - |
| LL930_RS23590 (LL930_23565) | 21993..22697 | - | 705 | WP_274393972.1 | NYN domain-containing protein | - |
| LL930_RS23595 (LL930_23570) | 22945..23205 | + | 261 | WP_274393992.1 | hypothetical protein | - |
| LL930_RS23600 (LL930_23575) | 23186..23481 | - | 296 | Protein_27 | transposase | - |
| LL930_RS23605 (LL930_23580) | 23865..24809 | - | 945 | WP_274393973.1 | Eco29kI family restriction endonuclease | - |
| LL930_RS23610 (LL930_23585) | 24810..25967 | - | 1158 | WP_046932420.1 | DNA (cytosine-5-)-methyltransferase | - |
| LL930_RS23615 (LL930_23590) | 25960..26244 | - | 285 | WP_274393974.1 | ribbon-helix-helix domain-containing protein | - |
| LL930_RS23620 (LL930_23595) | 26273..26536 | - | 264 | WP_274393975.1 | hypothetical protein | - |
| LL930_RS23625 (LL930_23600) | 27603..28001 | + | 399 | WP_274393976.1 | hypothetical protein | - |
| LL930_RS23630 (LL930_23605) | 28265..28504 | + | 240 | WP_047340383.1 | hypothetical protein | - |
| LL930_RS23635 (LL930_23610) | 28520..29113 | + | 594 | WP_048485089.1 | hypothetical protein | - |
| LL930_RS23640 (LL930_23615) | 29192..29545 | + | 354 | WP_048485101.1 | hypothetical protein | - |
| LL930_RS23645 (LL930_23620) | 30090..30776 | + | 687 | WP_048485090.1 | hypothetical protein | - |
| LL930_RS23650 (LL930_23625) | 31633..32337 | + | 705 | WP_113224180.1 | DNA-binding protein | - |
| LL930_RS23655 (LL930_23630) | 32461..33099 | + | 639 | WP_047340389.1 | ParA family partition ATPase | - |
| LL930_RS23660 (LL930_23635) | 33096..33431 | + | 336 | WP_113224181.1 | hypothetical protein | - |
| LL930_RS23665 (LL930_23640) | 33680..33871 | + | 192 | WP_047340391.1 | hypothetical protein | - |
| LL930_RS23670 (LL930_23645) | 33931..34239 | + | 309 | WP_224229665.1 | hypothetical protein | - |
| LL930_RS23675 (LL930_23650) | 34743..35051 | + | 309 | WP_113224197.1 | CcgAII protein | - |
| LL930_RS23680 (LL930_23655) | 35968..36288 | - | 321 | WP_075241061.1 | hypothetical protein | - |
| LL930_RS23685 (LL930_23660) | 36503..36751 | - | 249 | WP_113224198.1 | hypothetical protein | - |
| LL930_RS23690 (LL930_23665) | 37444..37797 | - | 354 | WP_048485065.1 | hypothetical protein | - |
| LL930_RS23695 (LL930_23670) | 37846..38553 | - | 708 | WP_274393977.1 | StbB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|