MGE detailed information
MGE type: Genomic_island MGE length: 28198 bp
Accession: NZ_CP086133 Location: 3561870..3590067 Organism: Pantoea agglomerans strain DBM 3797 Replicon: chromosome
Accession: NZ_CP086133 Location: 3561870..3590067 Organism: Pantoea agglomerans strain DBM 3797 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LKW31_RS16700 (3557778) | 3557778..3558251 | + | 474 | WP_050679765.1 | PTS sugar transporter subunit IIA | - |
| LKW31_RS16705 (3558359) | 3558359..3559783 | + | 1425 | WP_228312300.1 | fructose-specific PTS transporter subunit EIIC | - |
| LKW31_RS16710 (3559789) | 3559789..3560649 | + | 861 | WP_022625345.1 | ketose-bisphosphate aldolase | - |
| LKW31_RS16715 (3560881) | 3560881..3561366 | - | 486 | WP_010671741.1 | Hcp family type VI secretion system effector | - |
| LKW31_RS16720 (3561368) | 3561368..3561889 | - | 522 | WP_157353451.1 | hypothetical protein | - |
| LKW31_RS16725 (3561870) | 3561870..3562385 | - | 516 | WP_010671743.1 | DUF2778 domain-containing protein | - |
| LKW31_RS16730 (3562633) | 3562633..3562887 | + | 255 | WP_228312672.1 | class II fructose-bisphosphate aldolase | - |
| LKW31_RS16735 (3562912) | 3562912..3563730 | - | 819 | WP_228312301.1 | CDP-diacylglycerol diphosphatase | - |
| LKW31_RS16740 (3564987) | 3564987..3565679 | + | 693 | WP_022625337.1 | LuxR family transcriptional regulator | - |
| LKW31_RS16745 (3565694) | 3565694..3566332 | - | 639 | WP_031593697.1 | acyl-homoserine-lactone synthase | - |
| LKW31_RS16750 (3567483) | 3567483..3567746 | - | 264 | WP_228312302.1 | hypothetical protein | - |
| LKW31_RS16755 (3567715) | 3567715..3567936 | - | 222 | WP_228312673.1 | DUF2778 domain-containing protein | - |
| LKW31_RS16760 (3567978) | 3567978..3568307 | - | 330 | WP_033787451.1 | endoribonuclease SymE | Toxin Detail |
| - (3568302) | 3568302..3568378 | + | 77 | NuclAT_0 | - | Antitoxin Detail |
| - (3568302) | 3568302..3568378 | + | 77 | NuclAT_0 | - | Antitoxin Detail |
| - (3568302) | 3568302..3568378 | + | 77 | NuclAT_0 | - | Antitoxin Detail |
| - (3568302) | 3568302..3568378 | + | 77 | NuclAT_0 | - | Antitoxin Detail |
| - (3568302) | 3568302..3568378 | + | 77 | NuclAT_1 | - | Antitoxin Detail |
| - (3568302) | 3568302..3568378 | + | 77 | NuclAT_1 | - | Antitoxin Detail |
| - (3568302) | 3568302..3568378 | + | 77 | NuclAT_1 | - | Antitoxin Detail |
| - (3568302) | 3568302..3568378 | + | 77 | NuclAT_1 | - | Antitoxin Detail |
| LKW31_RS16765 (3568830) | 3568830..3569153 | - | 324 | WP_039386786.1 | DNA-binding transcriptional regulator | - |
| LKW31_RS16770 (3569137) | 3569137..3569381 | - | 245 | Protein_3272 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LKW31_RS16775 (3569585) | 3569585..3570637 | + | 1053 | WP_228312303.1 | hypothetical protein | - |
| LKW31_RS16780 (3570631) | 3570631..3570906 | + | 276 | WP_033759756.1 | hypothetical protein | - |
| LKW31_RS16785 (3571091) | 3571091..3571288 | + | 198 | Protein_3275 | MarR family transcriptional regulator | - |
| LKW31_RS16790 (3571296) | 3571296..3572105 | + | 810 | Protein_3276 | IS3 family transposase ISEhe4 | Transposase |
| LKW31_RS16795 (3572491) | 3572491..3576009 | - | 3519 | WP_228312304.1 | AAA domain-containing protein | - |
| LKW31_RS16800 (3576271) | 3576271..3578004 | + | 1734 | WP_187511931.1 | AAA family ATPase | - |
| LKW31_RS16805 (3578001) | 3578001..3579902 | + | 1902 | WP_228312305.1 | N-6 DNA methylase | - |
| LKW31_RS16810 (3579983) | 3579983..3583045 | - | 3063 | WP_228312306.1 | HsdR family type I site-specific deoxyribonuclease | - |
| LKW31_RS16815 (3583058) | 3583058..3584212 | - | 1155 | WP_187511928.1 | restriction endonuclease subunit S | - |
| LKW31_RS16820 (3584213) | 3584213..3585703 | - | 1491 | WP_228312307.1 | class I SAM-dependent DNA methyltransferase | - |
| LKW31_RS16825 (3585700) | 3585700..3587199 | - | 1500 | WP_187511927.1 | class I SAM-dependent DNA methyltransferase | - |
| LKW31_RS16830 (3587199) | 3587199..3587426 | - | 228 | WP_001608810.1 | helix-turn-helix transcriptional regulator | - |
| LKW31_RS16840 (3588009) | 3588009..3589040 | - | 1032 | WP_228312674.1 | DUF1176 domain-containing protein | - |
| LKW31_RS16845 (3589190) | 3589190..3589576 | - | 387 | WP_228312308.1 | hypothetical protein | - |
| LKW31_RS16850 (3589606) | 3589606..3590067 | - | 462 | WP_228312309.1 | hypothetical protein | - |
| LKW31_RS16855 (3590446) | 3590446..3591459 | + | 1014 | WP_228312310.1 | HNH endonuclease domain-containing protein | - |
| LKW31_RS16860 (3591456) | 3591456..3592124 | + | 669 | WP_228312311.1 | class I SAM-dependent methyltransferase | - |
| LKW31_RS16865 (3592229) | 3592229..3593224 | - | 996 | WP_052271154.1 | YsnF/AvaK domain-containing protein | - |
| LKW31_RS16870 (3593241) | 3593241..3593642 | - | 402 | WP_010251609.1 | DUF2382 domain-containing protein | - |
| LKW31_RS16875 (3594187) | 3594187..3594696 | + | 510 | WP_010251612.1 | DUF2501 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|