MGE detailed information
MGE type: IS/Tn MGE length: 5750 bp
Accession: NZ_CP086133 Location: 2225062..2230811 Organism: Pantoea agglomerans strain DBM 3797 Replicon: chromosome
Accession: NZ_CP086133 Location: 2225062..2230811 Organism: Pantoea agglomerans strain DBM 3797 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LKW31_RS10300 (2220101) | 2220101..2222467 | + | 2367 | WP_045140381.1 | virulence factor SrfC family protein | - |
| LKW31_RS10305 (2222464) | 2222464..2222727 | - | 264 | WP_010670099.1 | barstar family protein | - |
| LKW31_RS10310 (2222730) | 2222730..2223164 | - | 435 | WP_010670098.1 | ribonuclease domain-containing protein | - |
| LKW31_RS10315 (2223251) | 2223251..2223592 | - | 342 | WP_009090299.1 | helix-turn-helix domain-containing protein | - |
| LKW31_RS10320 (2223895) | 2223895..2225049 | + | 1155 | WP_228312151.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LKW31_RS10325 (2225062) | 2225062..2228214 | + | 3153 | WP_228312152.1 | Efflux pump membrane transporter BepE | VF |
| LKW31_RS10330 (2228303) | 2228303..2228656 | - | 354 | WP_228312153.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LKW31_RS10335 (2228692) | 2228692..2229117 | - | 426 | WP_010245317.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LKW31_RS10340 (2229140) | 2229140..2229322 | - | 183 | WP_010245321.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LKW31_RS10345 (2229595) | 2229595..2230811 | + | 1217 | WP_172608054.1 | IS3 family transposase ISSen1 | Transposase |
| LKW31_RS10350 (2230841) | 2230841..2231323 | - | 483 | WP_228312154.1 | Rrf2 family transcriptional regulator | - |
| LKW31_RS10355 (2231531) | 2231531..2232715 | - | 1185 | WP_228312155.1 | MFS transporter | - |
| LKW31_RS10360 (2232918) | 2232918..2233847 | + | 930 | WP_033771708.1 | DNA replication terminus site-binding protein | - |
| LKW31_RS10365 (2233890) | 2233890..2235287 | - | 1398 | WP_010245332.1 | class II fumarate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|