MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 185470 bp
Accession: NZ_CP086071        Location: 1..185470         Organism: Rhodococcus pyridinivorans strain 4-4       Replicon: plasmid p_4-4_B


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LLA01_RS24190 (LLA01_24215) 1061..3223 + 2163 WP_252174586.1 P-loop NTPase fold protein -
LLA01_RS24195 (LLA01_24220) 3511..3759 + 249 WP_252174510.1 hypothetical protein -
LLA01_RS24200 (LLA01_24225) 3877..4953 - 1077 WP_252174511.1 patatin-like phospholipase family protein -
LLA01_RS24205 (LLA01_24230) 4950..7451 - 2502 WP_252174512.1 ThiF family adenylyltransferase -
LLA01_RS24210 (LLA01_24235) 7448..8755 - 1308 WP_252174513.1 hypothetical protein -
LLA01_RS24215 (LLA01_24240) 9212..9355 - 144 WP_252174514.1 hypothetical protein -
LLA01_RS24220 (LLA01_24245) 10138..10695 - 558 WP_252174515.1 hypothetical protein -
LLA01_RS24225 (LLA01_24250) 10695..11498 - 804 WP_252174516.1 hypothetical protein -
LLA01_RS24230 (LLA01_24255) 11491..11922 - 432 WP_252174517.1 GTP pyrophosphokinase VF
LLA01_RS24235 (LLA01_24260) 12249..13700 - 1452 WP_252174518.1 hypothetical protein -
LLA01_RS24240 (LLA01_24265) 13802..14380 + 579 WP_252174519.1 hypothetical protein -
LLA01_RS24245 (LLA01_24270) 14630..14866 - 237 WP_252174520.1 hypothetical protein -
LLA01_RS24250 (LLA01_24275) 14945..15091 - 147 WP_252174521.1 hypothetical protein -
LLA01_RS24255 (LLA01_24280) 15225..15674 - 450 WP_252174522.1 hypothetical protein -
LLA01_RS24260 (LLA01_24285) 15671..16324 - 654 WP_252174523.1 hypothetical protein -
LLA01_RS24265 (LLA01_24290) 16402..16737 - 336 WP_252174524.1 hypothetical protein -
LLA01_RS24270 (LLA01_24295) 16801..17061 - 261 WP_217580536.1 hypothetical protein -
LLA01_RS24275 (LLA01_24300) 17058..17498 - 441 WP_252174525.1 hypothetical protein -
LLA01_RS24280 (LLA01_24305) 17855..18979 - 1125 WP_252174526.1 hypothetical protein -
LLA01_RS24285 (LLA01_24310) 18972..19787 - 816 WP_012476938.1 N-formylglutamate amidohydrolase -
LLA01_RS24290 (LLA01_24315) 19900..20337 - 438 WP_252174527.1 helix-turn-helix domain-containing protein -
LLA01_RS24295 (LLA01_24320) 20436..20654 - 219 WP_024100336.1 hypothetical protein -
LLA01_RS24300 (LLA01_24325) 20755..21225 - 471 WP_024100337.1 hypothetical protein -
LLA01_RS24305 (LLA01_24330) 21272..21475 - 204 WP_252174528.1 hypothetical protein -
LLA01_RS24310 (LLA01_24335) 21787..23199 - 1413 WP_252174529.1 hypothetical protein -
LLA01_RS24315 (LLA01_24340) 23230..23889 - 660 WP_252174530.1 3'-5' exonuclease -
LLA01_RS24320 (LLA01_24345) 24113..24403 - 291 WP_252174531.1 hypothetical protein -
LLA01_RS24325 (LLA01_24350) 24476..25513 - 1038 WP_252174532.1 DUF3560 domain-containing protein -
LLA01_RS24330 (LLA01_24355) 25572..26159 - 588 WP_012476946.1 hypothetical protein -
LLA01_RS24335 (LLA01_24360) 26353..26622 + 270 WP_012476947.1 hypothetical protein -
LLA01_RS24340 (LLA01_24365) 26834..27355 - 522 WP_252174533.1 hypothetical protein -
LLA01_RS24345 (LLA01_24370) 27402..28055 - 654 WP_252174534.1 hypothetical protein -
LLA01_RS24350 (LLA01_24375) 28125..29414 - 1290 WP_252174535.1 insoluble domain protein -
LLA01_RS24355 (LLA01_24380) 29477..30865 - 1389 WP_252174536.1 ParA family protein -
LLA01_RS24360 (LLA01_24385) 30868..31215 - 348 WP_012476952.1 hypothetical protein -
LLA01_RS24365 (LLA01_24390) 31325..33481 - 2157 WP_252174537.1 FtsK/SpoIIIE domain-containing protein -
LLA01_RS24370 (LLA01_24395) 34593..34901 + 309 WP_217580502.1 hypothetical protein -
LLA01_RS24375 (LLA01_24400) 34944..35342 + 399 WP_248691005.1 hypothetical protein -
LLA01_RS24380 (LLA01_24405) 35339..38404 + 3066 WP_252174538.1 ATP-binding protein -
LLA01_RS24385 (LLA01_24410) 38503..40560 + 2058 WP_041804442.1 membrane protein -
LLA01_RS24390 (LLA01_24415) 40560..41402 + 843 WP_024100437.1 hypothetical protein -
LLA01_RS24395 (LLA01_24420) 41399..42997 + 1599 WP_252174539.1 Peptidoglycan endopeptidase RipB VF
LLA01_RS24400 (LLA01_24425) 43238..43810 + 573 WP_252174540.1 hypothetical protein -
LLA01_RS24405 (LLA01_24430) 43823..44416 + 594 WP_012476961.1 hypothetical protein -
LLA01_RS24410 (LLA01_24435) 44622..45320 - 699 WP_012476962.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG1 VF
LLA01_RS24415 (LLA01_24440) 45374..46333 - 960 WP_012476963.1 hypothetical protein -
LLA01_RS24420 (LLA01_24445) 46633..47064 - 432 WP_230792454.1 helix-turn-helix transcriptional regulator -
LLA01_RS24425 (LLA01_24450) 47476..48129 + 654 WP_252174541.1 hypothetical protein -
LLA01_RS24430 (LLA01_24455) 48096..48431 - 336 WP_252174542.1 hypothetical protein -
LLA01_RS24435 (LLA01_24460) 48858..50243 + 1386 WP_252174543.1 replication protein -
LLA01_RS24440 (LLA01_24465) 50400..51008 + 609 WP_231414595.1 hypothetical protein -
LLA01_RS24445 (LLA01_24470) 51356..52144 + 789 WP_024100448.1 Sporulation initiation inhibitor protein Soj VF
LLA01_RS24450 (LLA01_24475) 52144..52569 + 426 WP_252174544.1 hypothetical protein -
LLA01_RS24455 (LLA01_24480) 52756..53916 + 1161 WP_252174545.1 DUF2637 domain-containing protein -
LLA01_RS24460 (LLA01_24485) 53916..55709 + 1794 WP_252174546.1 hypothetical protein -
LLA01_RS24465 (LLA01_24490) 55776..56504 + 729 WP_252174547.1 hypothetical protein -
LLA01_RS24470 (LLA01_24495) 56697..58688 + 1992 WP_252174548.1 cutinase family protein -
LLA01_RS24475 (LLA01_24500) 59051..59278 + 228 WP_252174549.1 hypothetical protein -
LLA01_RS24480 (LLA01_24505) 59297..60046 - 750 WP_252174550.1 ISL3 family transposase ISFsp1 Transposase
LLA01_RS24485 (LLA01_24510) 59986..60903 - 918 WP_252174551.1 ISL3 family transposase ISFsp1 Transposase
LLA01_RS24490 (LLA01_24515) 61284..62015 + 732 WP_252174552.1 replication initiation protein -
LLA01_RS24495 (LLA01_24520) 62012..62278 + 267 WP_252174553.1 sigma factor-like helix-turn-helix DNA-binding protein -
LLA01_RS24500 (LLA01_24525) 63964..64299 - 336 WP_252174554.1 metal-sensitive transcriptional regulator -
LLA01_RS24505 (LLA01_24530) 64454..64663 - 210 WP_252174555.1 heavy metal-associated domain-containing protein -
LLA01_RS24510 (LLA01_24535) 64849..67206 - 2358 WP_252174556.1 Copper-exporting P-type ATPase VF
LLA01_RS24515 (LLA01_24540) 67275..68261 - 987 WP_252174557.1 hypothetical protein -
LLA01_RS24520 (LLA01_24545) 68287..68493 - 207 WP_252174558.1 heavy-metal-associated domain-containing protein -
LLA01_RS24525 (LLA01_24550) 69052..69927 + 876 WP_252174559.1 catechol 1,2-dioxygenase -
LLA01_RS24530 (LLA01_24555) 70016..71599 + 1584 WP_252174560.1 ATP-binding protein -
LLA01_RS24535 (LLA01_24560) 71964..72941 - 978 WP_252174561.1 HTH-type transcriptional regulator CdhR VF
LLA01_RS24540 (LLA01_24565) 73079..73717 + 639 WP_252174562.1 isochorismatase family protein -
LLA01_RS24545 (LLA01_24570) 73889..74323 + 435 Protein_71 MFS transporter -
LLA01_RS24550 (LLA01_24575) 74324..74619 - 296 Protein_72 IS3 family transposase -
LLA01_RS24555 (LLA01_24580) 74798..75781 - 984 WP_252174563.1 nitronate monooxygenase family protein -
LLA01_RS24560 (LLA01_24585) 76328..76828 + 501 WP_252174564.1 MarR family transcriptional regulator -
LLA01_RS24565 (LLA01_24590) 76921..78105 + 1185 WP_252174565.1 thiolase family protein -
LLA01_RS24570 (LLA01_24595) 78367..78822 - 456 Protein_76 IS5 family transposase ISAzba7 Transposase
LLA01_RS24575 (LLA01_24600) 79101..80321 + 1221 Protein_77 IS110 family transposase ISMpa1 Transposase
LLA01_RS24580 (LLA01_24605) 80342..80689 - 348 Protein_78 IS5 family transposase IS1647 Transposase
LLA01_RS24585 (LLA01_24610) 81765..82490 + 726 WP_252174566.1 DsbA family protein -
LLA01_RS24590 (LLA01_24615) 82841..83398 - 558 WP_252174567.1 CGNR zinc finger domain-containing protein -
LLA01_RS24595 (LLA01_24620) 83620..84492 + 873 WP_252174568.1 alpha/beta hydrolase -
LLA01_RS24600 (LLA01_24625) 84501..85925 + 1425 WP_252174569.1 mercury(II) reductase -
LLA01_RS24605 (LLA01_24630) 85929..86711 - 783 WP_252174570.1 (2Fe-2S) ferredoxin domain-containing protein -
LLA01_RS24610 (LLA01_24635) 86708..87520 - 813 WP_252174571.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
LLA01_RS24615 (LLA01_24640) 87517..88575 - 1059 WP_252174572.1 Hemin transport system permease protein HmuU VF
LLA01_RS24620 (LLA01_24645) 88572..89513 - 942 WP_252174575.1 ABC transporter substrate-binding protein -
LLA01_RS24625 (LLA01_24650) 90100..91527 - 1428 WP_252174573.1 ABC transporter substrate-binding protein -
LLA01_RS24630 (LLA01_24655) 91520..91933 - 414 WP_252174574.1 metalloregulator ArsR/SmtB family transcription factor -
LLA01_RS24635 (LLA01_24660) 93429..95132 - 1704 WP_252174450.1 tetratricopeptide repeat protein -
LLA01_RS24640 (LLA01_24665) 95202..96203 - 1002 WP_252174576.1 putative sulfate exporter family transporter -
LLA01_RS24645 (LLA01_24670) 96364..96837 - 474 WP_252174451.1 ISL3 family transposase ISFal1 Transposase
LLA01_RS24650 (LLA01_24675) 98416..98781 + 366 WP_252174452.1 metalloregulator ArsR/SmtB family transcription factor -
LLA01_RS24655 (LLA01_24680) 98890..98979 - 90 Protein_93 ISL3 family transposase IS31831 Transposase
LLA01_RS24660 (LLA01_24685) 99491..101107 + 1617 WP_252174453.1 long-chain-fatty-acid--CoA ligase -
LLA01_RS24665 (LLA01_24690) 101215..101922 + 708 WP_252174454.1 nitrile hydratase subunit beta -
LLA01_RS24670 (LLA01_24695) 101919..102518 + 600 WP_252174455.1 nitrile hydratase subunit alpha -
LLA01_RS24675 (LLA01_24700) 102524..102940 + 417 WP_252174577.1 nitrile hydratase accessory protein -
LLA01_RS24680 (LLA01_24705) 103337..104725 + 1389 WP_252174578.1 amidase -
LLA01_RS24685 (LLA01_24710) 104969..105853 + 885 WP_252174456.1 sulfurtransferase -
LLA01_RS24690 (LLA01_24715) 106368..106697 + 330 Protein_100 IS110 family transposase ISMpa1 Transposase
LLA01_RS24695 (LLA01_24720) 106730..107035 - 306 Protein_101 IS110 family transposase ISMpa1 Transposase
LLA01_RS24700 (LLA01_24725) 107050..108418 - 1369 Protein_102 ISL3 family transposase IS204 Transposase
LLA01_RS24705 (LLA01_24730) 108497..108754 - 258 Protein_103 ISL3 family transposase IS13869 Transposase
LLA01_RS24710 (LLA01_24735) 108928..109269 - 342 Protein_104 ISL3 family transposase IS13869 Transposase
LLA01_RS24715 (LLA01_24740) 109367..109774 + 408 Protein_105 IS630 family transposase ISBj5 Transposase
LLA01_RS24720 (LLA01_24745) 109777..110757 - 981 WP_252174579.1 acryloyl-CoA reductase -
LLA01_RS24725 (LLA01_24750) 111607..112842 - 1236 WP_252174580.1 Acyl-CoA dehydrogenase VF
LLA01_RS24730 (LLA01_24755) 112933..113688 + 756 WP_252174457.1 PaaX family transcriptional regulator C-terminal domain-containing protein -
LLA01_RS24735 (LLA01_24760) 114057..114359 + 303 WP_252174458.1 carboxymuconolactone decarboxylase family protein -
LLA01_RS24740 (LLA01_24765) 114630..115511 - 882 WP_252174459.1 IS630 family transposase -
LLA01_RS24745 (LLA01_24770) 115620..115963 + 344 Protein_111 transposase -
LLA01_RS24750 (LLA01_24775) 115985..117207 - 1223 Protein_112 IS110 family transposase ISMpa1 Transposase
LLA01_RS24755 (LLA01_24780) 117404..118798 + 1395 WP_252173125.1 IS1380 family transposase ISRer1 Transposase
LLA01_RS24760 (LLA01_24785) 119662..120460 + 799 Protein_114 IS5 family transposase ISRhosp9 Transposase
LLA01_RS24765 (LLA01_24790) 120585..120782 + 198 WP_252174460.1 DUF1778 domain-containing protein Antitoxin Detail
LLA01_RS24770 (LLA01_24795) 120779..121156 + 378 WP_252174461.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
LLA01_RS24775 (LLA01_24800) 121384..121719 - 336 WP_252174462.1 hypothetical protein -
LLA01_RS24780 (LLA01_24805) 121884..122042 + 159 WP_252174463.1 hypothetical protein -
LLA01_RS24785 (LLA01_24810) 122115..122444 - 330 WP_252174464.1 carboxymuconolactone decarboxylase family protein -
LLA01_RS24790 (LLA01_24815) 122589..122933 - 345 WP_252174465.1 metal-sensitive transcriptional regulator -
LLA01_RS24795 (LLA01_24820) 122945..124987 - 2043 WP_252174581.1 Copper-exporting P-type ATPase B VF
LLA01_RS24800 (LLA01_24825) 125170..125580 - 411 WP_252174466.1 YdhK family protein -
LLA01_RS24805 (LLA01_24830) 125734..127251 - 1518 WP_252174467.1 MFS transporter -
LLA01_RS24810 (LLA01_24835) 127299..129569 - 2271 WP_252174468.1 Copper-exporting P-type ATPase VF
LLA01_RS24815 (LLA01_24840) 129636..130274 - 639 WP_252174469.1 YdhK family protein -
LLA01_RS24820 (LLA01_24845) 130274..130438 - 165 WP_252174470.1 heavy metal transporter -
LLA01_RS24825 (LLA01_24850) 130606..131115 + 510 WP_252174471.1 aldehyde dehydrogenase family protein -
LLA01_RS24830 (LLA01_24855) 131212..131334 + 123 Protein_128 IS3 family transposase -
LLA01_RS24835 (LLA01_24860) 131545..131871 + 327 WP_252174472.1 IS110 family transposase ISMpa1 Transposase
LLA01_RS24840 (LLA01_24865) 131805..132038 - 234 WP_252174587.1 IS3 family transposase ISRhosp5 Transposase
LLA01_RS24845 (LLA01_24870) 132324..133073 - 750 WP_252174473.1 IclR family transcriptional regulator C-terminal domain-containing protein -
LLA01_RS24850 (LLA01_24875) 133070..134542 - 1473 WP_252174474.1 APC family permease -
LLA01_RS24855 (LLA01_24880) 135084..136574 + 1491 WP_252174475.1 APC family permease -
LLA01_RS24860 (LLA01_24885) 136571..138502 + 1932 WP_252174476.1 primary-amine oxidase -
LLA01_RS24865 (LLA01_24890) 138508..138957 + 450 WP_252174477.1 hypothetical protein -
LLA01_RS24870 (LLA01_24895) 139066..140601 + 1536 WP_252174478.1 AMP-binding protein -
LLA01_RS24875 (LLA01_24900) 140824..142347 + 1524 WP_252174479.1 aldehyde dehydrogenase family protein -
LLA01_RS24880 (LLA01_24905) 143152..143391 + 240 WP_252174480.1 IS701 family transposase ISNpu7 Transposase
LLA01_RS24885 (LLA01_24910) 143467..144543 + 1077 WP_252174481.1 transposase -
LLA01_RS24890 (LLA01_24915) 144604..146019 - 1416 WP_252174482.1 MBL fold metallo-hydrolase -
LLA01_RS24895 (LLA01_24920) 146096..146926 - 831 WP_252174483.1 sulfite exporter TauE/SafE family protein -
LLA01_RS24900 (LLA01_24925) 146978..147697 - 720 WP_252174582.1 GntR family transcriptional regulator -
LLA01_RS24905 (LLA01_24930) 148194..148313 - 120 Protein_143 IS630 family transposase ISAcma29 Transposase
LLA01_RS24910 (LLA01_24935) 148910..149839 - 930 WP_252174484.1 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein -
LLA01_RS24915 (LLA01_24940) 150162..150530 + 369 WP_252174485.1 hypothetical protein -
LLA01_RS24920 (LLA01_24945) 150703..151590 - 888 WP_252174583.1 dihydrodipicolinate synthase family protein -
LLA01_RS24925 (LLA01_24950) 151616..152404 - 789 WP_252174486.1 aldolase -
LLA01_RS24930 (LLA01_24955) 152556..153164 + 609 WP_252174584.1 XRE family transcriptional regulator -
LLA01_RS24935 (LLA01_24960) 153509..154153 + 645 WP_252174487.1 hypothetical protein -
LLA01_RS24940 (LLA01_24965) 154596..155093 + 498 Protein_150 IS481 family transposase ISRae1 Transposase
LLA01_RS24945 (LLA01_24970) 155169..155405 - 237 Protein_151 IS256 family transposase ISRo1 Transposase
LLA01_RS24950 (LLA01_24975) 155450..157405 - 1956 WP_252174488.1 tyrosine-type recombinase/integrase -
LLA01_RS24955 (LLA01_24980) 157402..158457 - 1056 WP_252174489.1 tyrosine-type recombinase/integrase -
LLA01_RS24960 (LLA01_24985) 158571..159462 - 892 Protein_154 IS256 family transposase ISRo1 Transposase
LLA01_RS24965 (LLA01_24990) 159614..160246 + 633 Protein_155 succinyl-CoA--3-ketoacid-CoA transferase -
LLA01_RS24970 (LLA01_24995) 160248..160895 + 648 WP_252174490.1 CoA transferase subunit B -
LLA01_RS24975 (LLA01_25000) 161161..162222 - 1062 WP_252174491.1 IS110 family transposase IS1547 Transposase
LLA01_RS24980 (LLA01_25005) 162583..163362 - 780 WP_252174492.1 alpha/beta fold hydrolase -
LLA01_RS24985 (LLA01_25010) 163359..164003 - 645 WP_252174493.1 carboxymuconolactone decarboxylase family protein -
LLA01_RS24990 (LLA01_25015) 164000..164443 - 444 WP_252174494.1 nuclear transport factor 2 family protein -
LLA01_RS24995 (LLA01_25020) 164440..165357 - 918 WP_252174495.1 fumarylacetoacetate hydrolase family protein -
LLA01_RS25000 (LLA01_25025) 165354..166214 - 861 WP_252174496.1 hypothetical protein -
LLA01_RS25005 (LLA01_25030) 166202..166594 - 393 WP_252174497.1 hypothetical protein -
LLA01_RS25010 (LLA01_25035) 166591..167835 - 1245 WP_252174498.1 FAD-dependent oxidoreductase -
LLA01_RS25015 (LLA01_25040) 167832..168149 - 318 WP_252174499.1 2Fe-2S iron-sulfur cluster-binding protein -
LLA01_RS25020 (LLA01_25045) 168179..169381 - 1203 WP_252174500.1 cytochrome P450 -
LLA01_RS25025 (LLA01_25050) 169516..170424 - 909 WP_252174501.1 HTH-type transcriptional regulator CysB VF
LLA01_RS25030 (LLA01_25055) 170533..171888 - 1356 WP_252174502.1 MFS transporter -
LLA01_RS25035 (LLA01_25060) 172386..173693 - 1308 WP_252174503.1 LLM class flavin-dependent oxidoreductase -
LLA01_RS25040 (LLA01_25065) 173753..175282 - 1530 WP_252174504.1 ABC transporter substrate-binding protein -
LLA01_RS25045 (LLA01_25070) 175279..175608 - 330 WP_252174505.1 Glutathione import ATP-binding protein GsiA VF
LLA01_RS25050 (LLA01_25075) 175633..177001 - 1369 Protein_172 ISL3 family transposase IS204 Transposase
LLA01_RS25055 (LLA01_25080) 177081..177572 - 492 WP_024100481.1 hypothetical protein -
LLA01_RS25060 (LLA01_25085) 178417..179091 + 675 WP_229564992.1 hypothetical protein -
LLA01_RS25065 (LLA01_25090) 179088..179933 + 846 WP_229564991.1 hypothetical protein -
LLA01_RS25070 (LLA01_25095) 180040..180933 + 894 WP_252174506.1 hypothetical protein -
LLA01_RS25075 (LLA01_25100) 181266..181472 + 207 WP_252174507.1 helix-turn-helix domain-containing protein -
LLA01_RS25080 (LLA01_25105) 181439..181732 + 294 WP_229564988.1 hypothetical protein -
LLA01_RS25085 (LLA01_25110) 181861..182961 + 1101 WP_252174508.1 DUF4238 domain-containing protein -
LLA01_RS25090 (LLA01_25115) 183007..184464 - 1458 WP_252174509.1 hypothetical protein -
LLA01_RS25095 (LLA01_25120) 184598..184807 + 210 WP_252174585.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance