MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 90578 bp
Accession: NZ_CP086016 Location: 1254742..1345319 Organism: Pseudomonas aeruginosa isolate KB-PA_3 Replicon: chromosome
Accession: NZ_CP086016 Location: 1254742..1345319 Organism: Pseudomonas aeruginosa isolate KB-PA_3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LKM46_RS05820 (LKM46_05820) | 1249911..1250873 | + | 963 | WP_033972915.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| LKM46_RS05825 (LKM46_05825) | 1250870..1251598 | + | 729 | WP_033972914.1 | peptidoglycan editing factor PgeF | - |
| LKM46_RS05830 (LKM46_05830) | 1251755..1254319 | + | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| LKM46_RS05850 (LKM46_05850) | 1255126..1256427 | - | 1302 | WP_003454526.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LKM46_RS05855 (LKM46_05855) | 1256424..1258346 | - | 1923 | WP_022580137.1 | MobH family relaxase | - |
| LKM46_RS05860 (LKM46_05860) | 1258506..1259756 | - | 1251 | WP_003119430.1 | IS256 family transposase ISRso7 | Transposase |
| LKM46_RS05865 (LKM46_05865) | 1260140..1260379 | + | 240 | WP_023082682.1 | hypothetical protein | - |
| LKM46_RS05870 (LKM46_05870) | 1260405..1261322 | + | 918 | WP_023082681.1 | hypothetical protein | - |
| LKM46_RS05875 (LKM46_05875) | 1261332..1261691 | - | 360 | WP_012076884.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LKM46_RS05880 (LKM46_05880) | 1261695..1261967 | - | 273 | WP_022580142.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LKM46_RS05885 (LKM46_05885) | 1262086..1262442 | + | 357 | WP_003111731.1 | hypothetical protein | - |
| LKM46_RS05890 (LKM46_05890) | 1262487..1264019 | - | 1533 | WP_023108761.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| LKM46_RS05895 (LKM46_05895) | 1264016..1264360 | - | 345 | WP_003456714.1 | hypothetical protein | - |
| LKM46_RS05900 (LKM46_05900) | 1264360..1265742 | - | 1383 | WP_003117085.1 | integrating conjugative element protein | - |
| LKM46_RS05905 (LKM46_05905) | 1265766..1266704 | - | 939 | WP_009875853.1 | TIGR03756 family integrating conjugative element protein | - |
| LKM46_RS05910 (LKM46_05910) | 1266704..1267135 | - | 432 | WP_023518409.1 | TIGR03757 family integrating conjugative element protein | - |
| LKM46_RS05915 (LKM46_05915) | 1267401..1269503 | + | 2103 | WP_023092930.1 | ATP-binding protein | - |
| LKM46_RS05920 (LKM46_05920) | 1269490..1270743 | - | 1254 | WP_003151440.1 | DNA cytosine methyltransferase | - |
| LKM46_RS05925 (LKM46_05925) | 1270899..1271570 | - | 672 | WP_023092929.1 | DsbA family protein | - |
| LKM46_RS05930 (LKM46_05930) | 1271567..1271851 | - | 285 | WP_003086159.1 | hypothetical protein | - |
| LKM46_RS05935 (LKM46_05935) | 1271848..1274790 | - | 2943 | WP_115747678.1 | conjugative transfer ATPase | - |
| LKM46_RS05940 (LKM46_05940) | 1274790..1275233 | - | 444 | WP_043093476.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| LKM46_RS05945 (LKM46_05945) | 1275211..1276716 | - | 1506 | WP_020751098.1 | TIGR03752 family integrating conjugative element protein | - |
| LKM46_RS05950 (LKM46_05950) | 1276700..1277585 | - | 886 | Protein_1174 | TIGR03749 family integrating conjugative element protein | - |
| LKM46_RS05955 (LKM46_05955) | 1277582..1278239 | - | 658 | Protein_1175 | TIGR03746 family integrating conjugative element protein | - |
| LKM46_RS33900 | 1278236..1278316 | - | 81 | WP_265590108.1 | hypothetical protein | - |
| LKM46_RS05965 (LKM46_05960) | 1278280..1278621 | - | 342 | WP_265590006.1 | DUF3487 family protein | - |
| LKM46_RS05970 (LKM46_05965) | 1278632..1278986 | - | 355 | Protein_1178 | TIGR03745 family integrating conjugative element membrane protein | - |
| LKM46_RS05975 (LKM46_05970) | 1279004..1279235 | - | 232 | Protein_1179 | TIGR03758 family integrating conjugative element protein | - |
| LKM46_RS05980 (LKM46_05975) | 1279264..1279562 | - | 299 | Protein_1180 | RAQPRD family integrative conjugative element protein | - |
| LKM46_RS05985 (LKM46_05980) | 1279593..1279895 | - | 303 | WP_228240892.1 | hypothetical protein | - |
| LKM46_RS05990 (LKM46_05985) | 1280081..1281557 | - | 1477 | Protein_1182 | UvrD-helicase domain-containing protein | - |
| LKM46_RS05995 (LKM46_05990) | 1281798..1282289 | - | 492 | WP_003099826.1 | hypothetical protein | - |
| LKM46_RS06000 (LKM46_05995) | 1282307..1283051 | - | 745 | Protein_1184 | TIGR03747 family integrating conjugative element membrane protein | - |
| LKM46_RS06005 (LKM46_06000) | 1283051..1285279 | - | 2229 | Protein_1185 | type IV conjugative transfer system coupling protein TraD | - |
| LKM46_RS06010 (LKM46_06005) | 1285291..1285551 | - | 261 | WP_228240894.1 | hypothetical protein | - |
| LKM46_RS06015 (LKM46_06010) | 1285558..1286058 | - | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| LKM46_RS06020 (LKM46_06015) | 1286055..1286634 | - | 580 | Protein_1188 | lytic transglycosylase domain-containing protein | - |
| LKM46_RS06025 (LKM46_06020) | 1286619..1287373 | - | 755 | Protein_1189 | TIGR03759 family integrating conjugative element protein | - |
| LKM46_RS06030 (LKM46_06025) | 1287384..1288028 | - | 645 | Protein_1190 | methyl-accepting chemotaxis protein | - |
| LKM46_RS06035 (LKM46_06030) | 1288531..1289865 | - | 1335 | WP_003117070.1 | three-Cys-motif partner protein TcmP | - |
| LKM46_RS06040 (LKM46_06035) | 1289883..1290626 | - | 744 | WP_003117069.1 | phage Gp37/Gp68 family protein | - |
| LKM46_RS06045 (LKM46_06040) | 1290859..1292070 | - | 1212 | WP_223697283.1 | three-Cys-motif partner protein TcmP | - |
| LKM46_RS06050 (LKM46_06045) | 1292249..1292705 | - | 457 | Protein_1194 | IS3 family transposase | - |
| LKM46_RS06055 (LKM46_06050) | 1292800..1295049 | - | 2250 | WP_042166055.1 | DEAD/DEAH box helicase | - |
| LKM46_RS06060 (LKM46_06055) | 1295154..1296599 | - | 1446 | WP_003099801.1 | DUF6094 domain-containing protein | - |
| LKM46_RS06065 (LKM46_06060) | 1296629..1297234 | - | 606 | WP_003099799.1 | hypothetical protein | - |
| LKM46_RS06070 (LKM46_06065) | 1297327..1297587 | - | 261 | WP_003099797.1 | hypothetical protein | - |
| LKM46_RS06075 (LKM46_06070) | 1297655..1298017 | - | 363 | WP_003099795.1 | hypothetical protein | - |
| LKM46_RS06080 (LKM46_06075) | 1298087..1298362 | - | 276 | WP_003099794.1 | hypothetical protein | - |
| LKM46_RS06085 (LKM46_06080) | 1298359..1298991 | - | 633 | WP_003099792.1 | DUF3275 family protein | - |
| LKM46_RS06090 (LKM46_06085) | 1299048..1299398 | - | 351 | WP_003099791.1 | hypothetical protein | - |
| LKM46_RS06095 (LKM46_06090) | 1299634..1300347 | - | 714 | WP_003121003.1 | hypothetical protein | - |
| LKM46_RS06100 (LKM46_06095) | 1300539..1300736 | - | 198 | WP_003448593.1 | hypothetical protein | - |
| LKM46_RS06105 (LKM46_06100) | 1300810..1300968 | - | 159 | WP_003121002.1 | hypothetical protein | - |
| LKM46_RS06110 (LKM46_06105) | 1301106..1301594 | - | 489 | WP_042166679.1 | STY4534 family ICE replication protein | - |
| LKM46_RS33905 | 1301917..1302051 | - | 135 | WP_003121000.1 | hypothetical protein | - |
| LKM46_RS06115 (LKM46_06110) | 1302053..1302232 | - | 180 | WP_004347955.1 | hypothetical protein | - |
| LKM46_RS06120 (LKM46_06115) | 1302309..1302875 | - | 567 | WP_003120999.1 | hypothetical protein | - |
| LKM46_RS06125 (LKM46_06120) | 1303797..1304234 | - | 438 | WP_003120998.1 | hypothetical protein | VF |
| LKM46_RS06130 (LKM46_06125) | 1304252..1305631 | - | 1380 | WP_022579630.1 | hypothetical protein | VF |
| LKM46_RS06135 (LKM46_06130) | 1305624..1306580 | - | 957 | WP_023093675.1 | ATPase, T2SS/T4P/T4SS family | - |
| LKM46_RS06140 (LKM46_06135) | 1306577..1307107 | - | 531 | WP_003099765.1 | hypothetical protein | VF |
| LKM46_RS06145 (LKM46_06140) | 1307129..1308208 | - | 1080 | WP_003109360.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| LKM46_RS06150 (LKM46_06145) | 1308208..1309788 | - | 1581 | WP_003149523.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| LKM46_RS06155 (LKM46_06150) | 1309797..1310330 | - | 534 | WP_003149521.1 | type IV pilus biogenesis protein PilP | - |
| LKM46_RS06160 (LKM46_06155) | 1310320..1311645 | - | 1326 | WP_022579625.1 | type 4b pilus protein PilO2 | - |
| LKM46_RS06165 (LKM46_06160) | 1311649..1313358 | - | 1710 | WP_023093673.1 | Outer membrane lipoprotein BfpB | VF |
| LKM46_RS06170 (LKM46_06165) | 1313358..1314482 | - | 1125 | WP_023093672.1 | hypothetical protein | VF |
| LKM46_RS06175 (LKM46_06170) | 1314684..1314983 | + | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LKM46_RS06180 (LKM46_06175) | 1314980..1315270 | + | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| LKM46_RS06185 (LKM46_06180) | 1315353..1315688 | - | 336 | WP_022579623.1 | hypothetical protein | - |
| LKM46_RS06190 (LKM46_06185) | 1315827..1317803 | - | 1977 | WP_023093671.1 | DEAD/DEAH box helicase | - |
| LKM46_RS06195 (LKM46_06190) | 1317800..1319695 | - | 1896 | WP_155713823.1 | hypothetical protein | - |
| LKM46_RS06200 (LKM46_06195) | 1320009..1320755 | - | 747 | WP_022579621.1 | hypothetical protein | - |
| LKM46_RS06205 (LKM46_06200) | 1320769..1322688 | - | 1920 | WP_022579620.1 | type I DNA topoisomerase | - |
| LKM46_RS06210 (LKM46_06205) | 1322804..1322971 | - | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| LKM46_RS06215 (LKM46_06210) | 1323078..1323389 | - | 312 | WP_022579619.1 | helix-turn-helix transcriptional regulator | - |
| LKM46_RS06220 (LKM46_06215) | 1323539..1324027 | - | 489 | WP_022579618.1 | single-stranded DNA-binding protein | - |
| LKM46_RS06225 (LKM46_06220) | 1324057..1324887 | - | 831 | WP_023108757.1 | Rha family transcriptional regulator | - |
| LKM46_RS06230 (LKM46_06225) | 1324935..1325483 | - | 549 | WP_022579615.1 | DUF3158 family protein | - |
| LKM46_RS06235 (LKM46_06230) | 1325489..1326217 | - | 729 | WP_003448749.1 | TIGR03761 family integrating conjugative element protein | - |
| LKM46_RS06240 (LKM46_06235) | 1326374..1326544 | - | 171 | WP_003159716.1 | hypothetical protein | - |
| LKM46_RS06245 (LKM46_06240) | 1329083..1330408 | - | 1326 | WP_031675614.1 | STY4528 family pathogenicity island replication protein | - |
| LKM46_RS06250 (LKM46_06245) | 1330411..1331166 | - | 756 | WP_003121580.1 | DUF2857 domain-containing protein | - |
| LKM46_RS06255 (LKM46_06250) | 1331194..1332927 | - | 1734 | WP_003448780.1 | ParB family protein | - |
| LKM46_RS06260 (LKM46_06255) | 1332924..1333193 | - | 270 | WP_003448782.1 | Arc family DNA-binding protein | - |
| LKM46_RS06265 (LKM46_06260) | 1333214..1334104 | - | 891 | WP_003119279.1 | DNA adenine methylase | - |
| LKM46_RS06270 (LKM46_06265) | 1334101..1335123 | - | 1023 | WP_010792224.1 | nucleoid-associated protein YejK | - |
| LKM46_RS06275 (LKM46_06270) | 1335123..1335356 | - | 234 | WP_003103841.1 | hypothetical protein | - |
| LKM46_RS06280 (LKM46_06275) | 1335349..1335588 | - | 240 | WP_023082652.1 | hypothetical protein | - |
| LKM46_RS06285 (LKM46_06280) | 1335581..1335838 | - | 258 | WP_003448812.1 | hypothetical protein | - |
| LKM46_RS06290 (LKM46_06285) | 1335835..1336362 | - | 528 | WP_003448815.1 | hypothetical protein | - |
| LKM46_RS06295 (LKM46_06290) | 1336352..1336537 | - | 186 | WP_003157042.1 | hypothetical protein | - |
| LKM46_RS06300 (LKM46_06295) | 1336715..1337152 | + | 438 | WP_003157043.1 | hypothetical protein | - |
| LKM46_RS06305 (LKM46_06300) | 1338087..1338533 | + | 447 | WP_003117028.1 | hypothetical protein | - |
| LKM46_RS06310 (LKM46_06305) | 1338972..1340315 | - | 1344 | WP_023082650.1 | replicative DNA helicase | - |
| LKM46_RS06315 (LKM46_06310) | 1340312..1340536 | - | 225 | WP_009315888.1 | hypothetical protein | - |
| LKM46_RS06320 (LKM46_06315) | 1340520..1341227 | - | 708 | WP_023082649.1 | HNH endonuclease signature motif containing protein | - |
| LKM46_RS06325 (LKM46_06320) | 1341224..1341925 | - | 702 | WP_023082648.1 | DUF2786 domain-containing protein | - |
| LKM46_RS06330 (LKM46_06325) | 1341925..1343076 | - | 1152 | WP_023108755.1 | Lar family restriction alleviation protein | - |
| LKM46_RS06335 (LKM46_06330) | 1343073..1343570 | - | 498 | WP_003111783.1 | hypothetical protein | - |
| LKM46_RS06340 (LKM46_06335) | 1343567..1344304 | - | 738 | WP_155697912.1 | hypothetical protein | - |
| LKM46_RS06345 (LKM46_06340) | 1344306..1345172 | - | 867 | WP_023108753.1 | ParA family protein | - |
| LKM46_RS06350 (LKM46_06345) | 1345680..1345987 | - | 308 | Protein_1255 | recombinase XerC | - |
| LKM46_RS06355 (LKM46_06350) | 1346171..1349191 | - | 3021 | WP_042170724.1 | GLUG motif-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|