MGE detailed information
MGE type: IScluster/Tn MGE length: 12505 bp
Accession: NZ_CP085982 Location: 23035..35539 Organism: Salmonella enterica strain SZL 30 Replicon: plasmid pSZL30.1
Accession: NZ_CP085982 Location: 23035..35539 Organism: Salmonella enterica strain SZL 30 Replicon: plasmid pSZL30.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJY16_RS23130 (LJY16_23130) | 19587..20126 | - | 540 | WP_023994146.1 | type 1 fimbrial protein | - |
| LJY16_RS23135 (LJY16_23135) | 20171..20491 | - | 321 | WP_031619575.1 | adhesin biosynthesis transcription regulatory family protein | - |
| LJY16_RS23140 (LJY16_23140) | 21040..21227 | + | 188 | Protein_24 | dolichol monophosphate mannose synthase | - |
| LJY16_RS23145 (LJY16_23145) | 21453..22363 | - | 911 | Protein_25 | relaxase NikB | - |
| LJY16_RS23150 (LJY16_23150) | 22476..22808 | - | 333 | Protein_26 | plasmid mobilization protein MobA | - |
| LJY16_RS23155 (LJY16_23155) | 23035..24243 | - | 1209 | WP_023994152.1 | IS200-IS605 family transposase IS609 | Transposase |
| LJY16_RS23160 (LJY16_23160) | 24599..24850 | + | 252 | WP_023994153.1 | helix-turn-helix domain-containing protein | - |
| LJY16_RS23165 (LJY16_23165) | 24892..25104 | - | 213 | WP_023994154.1 | hypothetical protein | VF |
| LJY16_RS23170 (LJY16_23170) | 25163..26119 | - | 957 | WP_023994155.1 | Recombination-promoting nuclease RpnA | VF |
| LJY16_RS23175 (LJY16_23175) | 26190..26432 | - | 243 | WP_023994156.1 | hypothetical protein | - |
| LJY16_RS24400 | 26419..26661 | - | 243 | WP_023994157.1 | IS256 family transposase ISEc39 | Transposase |
| LJY16_RS24405 | 26661..27173 | - | 513 | Protein_33 | transposase | - |
| LJY16_RS23185 (LJY16_23185) | 27634..27986 | + | 353 | Protein_34 | transposase | - |
| LJY16_RS23190 (LJY16_23190) | 28060..28269 | - | 210 | WP_023994160.1 | hemolysin expression modulator Hha | - |
| LJY16_RS23195 (LJY16_23195) | 28586..29012 | - | 427 | Protein_36 | IS256 family transposase ISSod4 | Transposase |
| LJY16_RS23200 (LJY16_23200) | 29327..29809 | - | 483 | WP_023994162.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LJY16_RS23205 (LJY16_23205) | 29800..30084 | - | 285 | WP_001195098.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LJY16_RS23210 (LJY16_23210) | 30240..30329 | - | 90 | WP_071790431.1 | helix-turn-helix domain-containing protein | - |
| LJY16_RS23215 (LJY16_23215) | 30453..30650 | + | 198 | Protein_40 | PIN domain-containing protein | - |
| LJY16_RS23220 (LJY16_23220) | 30872..31207 | - | 336 | WP_023994164.1 | hypothetical protein | - |
| LJY16_RS23225 (LJY16_23225) | 31233..31496 | - | 264 | WP_023994165.1 | DUF977 family protein | - |
| LJY16_RS23230 (LJY16_23230) | 32246..32551 | - | 306 | WP_023994167.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LJY16_RS23235 (LJY16_23235) | 32548..32835 | - | 288 | WP_031619580.1 | damage-inducible protein J | - |
| LJY16_RS23240 (LJY16_23240) | 32804..33657 | - | 854 | Protein_45 | IS91 family transposase ISWz1 | Transposase |
| LJY16_RS23245 (LJY16_23245) | 33781..34110 | + | 330 | WP_023994169.1 | IS66 family transposase ISEc49 | Transposase |
| LJY16_RS23250 (LJY16_23250) | 34097..34243 | + | 147 | Protein_47 | IS66 family transposase ISEc49 | Transposase |
| LJY16_RS23255 (LJY16_23255) | 34514..35539 | - | 1026 | WP_023994171.1 | IS110 family transposase ISSfl8 | Transposase |
| LJY16_RS23260 (LJY16_23260) | 35611..35898 | + | 288 | Protein_49 | integrase | - |
| LJY16_RS23265 (LJY16_23265) | 36222..38531 | + | 2310 | WP_023994173.1 | TerB N-terminal domain-containing protein | - |
| LJY16_RS23270 (LJY16_23270) | 38535..39851 | + | 1317 | WP_023994174.1 | ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|