MGE detailed information
MGE type: Genomic_island MGE length: 45750 bp
Accession: NZ_CP085981 Location: 4387758..4433507 Organism: Salmonella enterica strain SZL 30 Replicon: chromosome
Accession: NZ_CP085981 Location: 4387758..4433507 Organism: Salmonella enterica strain SZL 30 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJY16_RS21570 () | 4385258..4385800 | + | 543 | WP_023994002.1 | type VI secretion system contractile sheath small subunit | - |
| LJY16_RS21575 () | 4385824..4387332 | + | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| LJY16_RS21580 () | 4387385..4387786 | + | 402 | WP_001147175.1 | BPSL0067 family protein | - |
| LJY16_RS21585 () | 4387758..4388183 | + | 426 | WP_001171576.1 | hypothetical protein | - |
| LJY16_RS21590 () | 4388420..4388905 | + | 486 | WP_000312802.1 | Protein hcp1 | VF |
| LJY16_RS21595 () | 4388972..4389166 | + | 195 | Protein_4130 | type VI secretion system lipoprotein TssJ | - |
| LJY16_RS21600 () | 4389209..4389694 | + | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| LJY16_RS21605 () | 4389679..4390062 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| LJY16_RS21610 () | 4390205..4390690 | + | 486 | WP_000119443.1 | Protein hcp1 | VF |
| LJY16_RS21615 () | 4390757..4391293 | + | 537 | WP_020898423.1 | hypothetical protein | VF |
| LJY16_RS21620 () | 4391297..4392640 | + | 1344 | WP_000118732.1 | hypothetical protein | VF |
| LJY16_RS21625 () | 4392637..4393941 | + | 1305 | WP_000132483.1 | Outer membrane porin F | VF |
| LJY16_RS21630 () | 4393946..4394719 | + | 774 | WP_023993999.1 | Rap1a/Tai family immunity protein | - |
| LJY16_RS21635 () | 4394921..4395352 | + | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
| LJY16_RS21640 () | 4395386..4399255 | + | 3870 | WP_023993998.1 | hypothetical protein | VF |
| LJY16_RS21645 () | 4399255..4400022 | + | 768 | WP_023993997.1 | TagF domain-containing protein | - |
| LJY16_RS21650 () | 4400065..4400535 | + | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| LJY16_RS21655 () | 4400520..4400981 | + | 462 | WP_001684272.1 | hypothetical protein | - |
| LJY16_RS21660 () | 4401017..4401112 | + | 96 | Protein_4143 | hypothetical protein | - |
| LJY16_RS21665 () | 4401109..4401525 | + | 417 | WP_000759642.1 | DUF2195 family protein | - |
| LJY16_RS21670 () | 4401549..4402070 | + | 522 | WP_023994364.1 | DUF2778 domain-containing protein | - |
| LJY16_RS21675 () | 4402467..4404698 | + | 2232 | WP_023993996.1 | Actin cross-linking toxin VgrG1 | VF |
| LJY16_RS21680 () | 4404758..4405216 | + | 459 | WP_023993995.1 | DcrB-related protein | - |
| LJY16_RS21685 () | 4405232..4409974 | + | 4743 | WP_023993994.1 | RHS repeat-associated core domain-containing protein | - |
| LJY16_RS21690 () | 4409971..4410315 | + | 345 | WP_023218822.1 | hypothetical protein | - |
| LJY16_RS21695 () | 4410382..4410639 | - | 258 | WP_023243487.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 4410464..4410796 | + | 333 | - | - | Antitoxin Detail |
| LJY16_RS21700 () | 4410973..4411266 | + | 294 | WP_039515457.1 | hypothetical protein | - |
| LJY16_RS21705 () | 4412084..4412551 | + | 468 | WP_000828178.1 | sugar tyrosine-protein kinase | - |
| LJY16_RS21710 () | 4412868..4413146 | + | 279 | WP_077677834.1 | hypothetical protein | - |
| LJY16_RS21715 () | 4413213..4413527 | - | 315 | WP_023892102.1 | SymE family type I addiction module toxin | - |
| LJY16_RS21720 () | 4413580..4414281 | + | 702 | Protein_4155 | integrase core domain-containing protein | - |
| LJY16_RS21725 () | 4414980..4415543 | + | 564 | WP_023993992.1 | Saf-pilin pilus formation protein SafA | - |
| LJY16_RS21730 () | 4415618..4416358 | + | 741 | WP_023204745.1 | Chaperone protein caf1M | VF |
| LJY16_RS21735 () | 4416382..4418892 | + | 2511 | WP_023993991.1 | F1 capsule-anchoring protein | VF |
| LJY16_RS21740 () | 4418914..4419384 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| LJY16_RS21745 () | 4419792..4420613 | + | 822 | WP_023994368.1 | polysaccharide deacetylase family protein | - |
| LJY16_RS21750 () | 4420696..4420936 | + | 241 | Protein_4161 | PerC family transcriptional regulator | - |
| LJY16_RS21755 () | 4421430..4422377 | + | 948 | WP_023993811.1 | LysR family transcriptional regulator | - |
| LJY16_RS21760 () | 4422497..4422616 | + | 120 | Protein_4163 | hypothetical protein | - |
| LJY16_RS21765 () | 4422697..4422883 | + | 187 | Protein_4164 | IS3 family transposase IS1351 | Transposase |
| LJY16_RS21770 () | 4422923..4423480 | - | 558 | Protein_4165 | IS21 family transposase ISEc62 | Transposase |
| LJY16_RS21775 () | 4424516..4425226 | + | 711 | WP_001009508.1 | hypothetical protein | VF |
| LJY16_RS21780 () | 4425277..4425852 | + | 576 | WP_000287810.1 | CFA/I fimbrial subunit B | VF |
| LJY16_RS21785 () | 4425961..4428648 | + | 2688 | WP_023993810.1 | hypothetical protein | VF |
| LJY16_RS21790 () | 4428671..4429750 | + | 1080 | WP_000066479.1 | fimbrial protein TcfD | - |
| LJY16_RS21795 () | 4429883..4430230 | + | 348 | WP_023993809.1 | Lrp/AsnC family transcriptional regulator | - |
| LJY16_RS21800 () | 4430470..4431087 | + | 618 | WP_000241747.1 | protein TioA | - |
| LJY16_RS21805 () | 4431689..4431822 | - | 134 | Protein_4172 | transposase | - |
| LJY16_RS21810 () | 4431858..4432046 | + | 189 | WP_031603649.1 | hypothetical protein | - |
| LJY16_RS21815 () | 4432050..4432769 | - | 720 | WP_000787601.1 | Outer membrane protein PagN | VF |
| LJY16_RS21820 () | 4433100..4433507 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| LJY16_RS21825 () | 4433817..4434584 | - | 768 | WP_023993808.1 | amidohydrolase | - |
| LJY16_RS21830 () | 4434693..4437137 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| LJY16_RS21835 () | 4437377..4437955 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|