MGE detailed information
MGE type: IS/Tn MGE length: 921 bp
Accession: NZ_CP085857 Location: 1988375..1989295 Organism: Vibrio parahaemolyticus strain LH214 Replicon: chromosome
Accession: NZ_CP085857 Location: 1988375..1989295 Organism: Vibrio parahaemolyticus strain LH214 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JK088_RS09410 (JK088_09415) | 1984266..1984550 | - | 285 | WP_014258232.1 | hypothetical protein | - |
| JK088_RS09415 (JK088_09420) | 1984594..1984683 | - | 90 | WP_075984317.1 | DUF3265 domain-containing protein | - |
| JK088_RS09420 (JK088_09425) | 1984701..1985876 | - | 1176 | WP_025502529.1 | HEPN-associated N-terminal domain-containing protein | - |
| JK088_RS09425 (JK088_09430) | 1986019..1986879 | - | 861 | WP_017449600.1 | hypothetical protein | - |
| JK088_RS09430 (JK088_09435) | 1987808..1988152 | - | 345 | WP_017449602.1 | hypothetical protein | - |
| JK088_RS09435 (JK088_09440) | 1988375..1989295 | + | 921 | WP_010446562.1 | IS5 family transposase ISVa2 | Transposase |
| JK088_RS09440 (JK088_09445) | 1989384..1989770 | - | 387 | WP_025983450.1 | NUDIX hydrolase | - |
| JK088_RS09445 (JK088_09450) | 1989920..1990369 | - | 450 | WP_017449604.1 | hypothetical protein | - |
| JK088_RS09450 (JK088_09455) | 1990561..1990980 | - | 420 | WP_017449605.1 | hypothetical protein | - |
| JK088_RS09455 (JK088_09460) | 1991136..1991585 | - | 450 | WP_017449606.1 | GNAT family N-acetyltransferase | - |
| JK088_RS09460 (JK088_09465) | 1992262..1992504 | + | 243 | WP_017449645.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| JK088_RS09465 (JK088_09470) | 1992501..1992800 | + | 300 | WP_017449644.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JK088_RS09470 (JK088_09475) | 1992808..1992897 | - | 90 | WP_074531745.1 | DUF3265 domain-containing protein | - |
| JK088_RS09475 (JK088_09480) | 1992929..1993297 | - | 369 | WP_017449638.1 | VOC family protein | - |
| JK088_RS09480 (JK088_09485) | 1993327..1993443 | - | 117 | WP_100224987.1 | DUF3265 domain-containing protein | - |
| JK088_RS09485 (JK088_09490) | 1993434..1994207 | - | 774 | WP_017449639.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|