MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP085824 Location: 1186423..1197778 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Ivysaur Replicon: chromosome
Accession: NZ_CP085824 Location: 1186423..1197778 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Ivysaur Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF36_RS05680 (1181869) | 1181869..1182967 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| LJF36_RS05685 (1182977) | 1182977..1184494 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| LJF36_RS05690 (1184570) | 1184570..1185115 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF36_RS05695 (1185380) | 1185380..1186138 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF36_RS05705 (1186423) | 1186423..1187229 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF36_RS05710 (1187509) | 1187509..1187760 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF36_RS05715 (1187969) | 1187969..1188196 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF36_RS05720 (1188196) | 1188196..1188594 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF36_RS05725 (1189402) | 1189402..1189938 | + | 537 | WP_001038502.1 | STM3031 family outer membrane protein | - |
| LJF36_RS05730 (1189985) | 1189985..1190617 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF36_RS05735 (1191336) | 1191336..1191917 | + | 582 | WP_001244651.1 | fimbrial protein | - |
| LJF36_RS05740 (1192037) | 1192037..1194520 | + | 2484 | WP_000705505.1 | fimbrial outer membrane usher protein StdB | - |
| LJF36_RS05745 (1194561) | 1194561..1195304 | + | 744 | WP_000798504.1 | fimbrial biogenesis chaperone StdC | - |
| LJF36_RS05750 (1195301) | 1195301..1196377 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF36_RS05755 (1196521) | 1196521..1197033 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF36_RS05760 (1197020) | 1197020..1197778 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF36_RS05765 (1197988) | 1197988..1198836 | - | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| LJF36_RS05770 (1198958) | 1198958..1199230 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF36_RS05775 (1199261) | 1199261..1200490 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF36_RS05780 (1200632) | 1200632..1201087 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF36_RS05785 (1201191) | 1201191..1202054 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |