MGE detailed information
MGE type: Prophage MGE length: 59707 bp
Accession: NZ_CP085821 Location: 1633872..1693578 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Charizard Replicon: chromosome
Accession: NZ_CP085821 Location: 1633872..1693578 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Charizard Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF63_RS07780 () | 1630145..1630786 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LJF63_RS07785 () | 1630886..1632064 | - | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LJF63_RS07790 () | 1632195..1632485 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| LJF63_RS07795 () | 1632553..1632906 | + | 354 | WP_001042123.1 | protein YebF | - |
| LJF63_RS07800 () | 1633000..1633659 | + | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| LJF63_RS07805 () | 1633872..1635923 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| LJF63_RS07810 () | 1635960..1636658 | - | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| LJF63_RS07815 () | 1636682..1637338 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| LJF63_RS07820 () | 1637446..1637676 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| LJF63_RS07825 () | 1637814..1638188 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| LJF63_RS07830 () | 1638189..1639064 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| LJF63_RS07835 () | 1639081..1639434 | + | 354 | WP_000722370.1 | YebY family protein | - |
| - | 1639534..1639679 | - | 146 | - | - | Antitoxin Detail |
| - | 1639574..1639677 | + | 104 | - | - | Toxin Detail |
| LJF63_RS07840 () | 1639817..1640896 | - | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| LJF63_RS07845 () | 1640871..1641149 | - | 279 | WP_001575998.1 | excisionase | - |
| LJF63_RS07850 () | 1641563..1643542 | + | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| LJF63_RS07855 () | 1643861..1643959 | + | 99 | WP_223151200.1 | hypothetical protein | - |
| LJF63_RS07860 () | 1644261..1644479 | + | 219 | WP_001524708.1 | hypothetical protein | - |
| LJF63_RS07865 () | 1644543..1645142 | + | 600 | WP_000940753.1 | DUF1367 family protein | - |
| LJF63_RS07870 () | 1645226..1645366 | + | 141 | Protein_1533 | recombination protein NinG | - |
| LJF63_RS07875 () | 1645363..1645499 | + | 137 | Protein_1534 | YlcG family protein | - |
| LJF63_RS07880 () | 1645496..1646185 | + | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| LJF63_RS07885 () | 1646279..1646806 | + | 528 | WP_000971762.1 | hypothetical protein | - |
| LJF63_RS07890 () | 1647180..1647629 | - | 450 | WP_000798708.1 | hypothetical protein | - |
| LJF63_RS07895 () | 1647990..1648676 | - | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| LJF63_RS07900 () | 1648952..1649281 | + | 330 | WP_001574216.1 | phage holin, lambda family | - |
| LJF63_RS07905 () | 1649265..1649717 | + | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| LJF63_RS23020 () | 1649735..1650214 | + | 480 | WP_001541990.1 | lysis protein | - |
| LJF63_RS07920 () | 1650422..1650733 | + | 312 | Protein_1542 | DUF1441 family protein | - |
| LJF63_RS07925 () | 1650813..1650992 | + | 180 | WP_000578541.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| LJF63_RS07930 () | 1651109..1651642 | - | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| LJF63_RS07935 () | 1651732..1652427 | + | 696 | WP_001152416.1 | phage minor tail protein L | - |
| LJF63_RS07940 () | 1652437..1652697 | + | 261 | Protein_1546 | C40 family peptidase | - |
| LJF63_RS07945 () | 1652697..1655028 | + | 2332 | Protein_1547 | host specificity protein J | - |
| LJF63_RS07950 () | 1655098..1655931 | + | 834 | WP_077943317.1 | DUF1983 domain-containing protein | - |
| LJF63_RS07955 () | 1655936..1656280 | + | 345 | Protein_1549 | tail fiber assembly protein | - |
| LJF63_RS07960 () | 1656482..1657204 | - | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| LJF63_RS07965 () | 1657414..1657655 | + | 242 | Protein_1551 | recombinase family protein | - |
| LJF63_RS07970 () | 1657684..1658484 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| LJF63_RS07975 () | 1659429..1660351 | - | 923 | Protein_1553 | hypothetical protein ; Integrase | Integrase |
| LJF63_RS07980 () | 1660615..1661076 | - | 462 | Protein_1554 | DNA breaking-rejoining protein | - |
| LJF63_RS07985 () | 1661065..1661256 | + | 192 | Protein_1555 | glycoside hydrolase family 19 protein | - |
| LJF63_RS07990 () | 1661310..1661843 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| LJF63_RS07995 () | 1662100..1662267 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| LJF63_RS08000 () | 1662332..1662520 | - | 189 | WP_001576014.1 | hypothetical protein | - |
| LJF63_RS08005 () | 1662575..1663066 | + | 492 | WP_000348541.1 | DUF1441 family protein | - |
| LJF63_RS08010 () | 1663053..1663620 | + | 568 | Protein_1560 | phage terminase large subunit family protein | - |
| LJF63_RS08015 () | 1663619..1664850 | + | 1232 | Protein_1561 | tail fiber protein | - |
| LJF63_RS23025 () | 1664860..1665147 | + | 288 | Protein_1562 | macro domain-containing protein | - |
| LJF63_RS08020 () | 1665160..1665671 | + | 512 | Protein_1563 | tail fiber assembly protein | - |
| LJF63_RS08025 () | 1665768..1665968 | - | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| LJF63_RS08030 () | 1666358..1666538 | - | 181 | Protein_1565 | IS3 family transposase | - |
| LJF63_RS08035 () | 1666529..1666630 | + | 102 | Protein_1566 | arsenic transporter | - |
| LJF63_RS08040 () | 1667239..1667471 | + | 233 | Protein_1567 | helix-turn-helix domain-containing protein | - |
| LJF63_RS08045 () | 1667798..1668412 | - | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| LJF63_RS08050 () | 1668422..1668580 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| LJF63_RS08055 () | 1668713..1669627 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| LJF63_RS08060 () | 1670877..1671343 | - | 467 | Protein_1571 | tyrosine-type recombinase/integrase | - |
| LJF63_RS08065 () | 1671413..1672620 | + | 1208 | Protein_1572 | IS256 family transposase ISEc39 | Transposase |
| LJF63_RS08070 () | 1672766..1672906 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| LJF63_RS08075 () | 1673072..1673341 | - | 270 | WP_001576019.1 | hypothetical protein | - |
| LJF63_RS08080 () | 1673714..1674133 | + | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| LJF63_RS08085 () | 1674506..1674982 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| LJF63_RS08090 () | 1675312..1675707 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| LJF63_RS08095 () | 1676391..1677113 | + | 723 | WP_000182071.1 | Guanine nucleotide exchange factor sopE2 | VF |
| LJF63_RS08100 () | 1677398..1677562 | + | 165 | WP_001134856.1 | membrane protein | - |
| LJF63_RS08105 () | 1677786..1678436 | + | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| LJF63_RS08110 () | 1678455..1678646 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| LJF63_RS08115 () | 1678757..1678993 | - | 237 | WP_024131108.1 | YebV family protein | - |
| LJF63_RS08120 () | 1679111..1680550 | - | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LJF63_RS08125 () | 1680628..1683261 | - | 2634 | WP_001529852.1 | hypothetical protein | VF |
| LJF63_RS08130 () | 1683230..1684513 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| LJF63_RS08135 () | 1684642..1685139 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| LJF63_RS08140 () | 1685237..1685923 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| LJF63_RS08145 () | 1685943..1687991 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| LJF63_RS08150 () | 1688185..1689066 | + | 882 | WP_000984498.1 | protease HtpX | - |
| LJF63_RS08155 () | 1689114..1690487 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| LJF63_RS08160 () | 1690663..1691454 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| LJF63_RS08165 () | 1691666..1691905 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| LJF63_RS08170 () | 1692063..1692206 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| LJF63_RS08175 () | 1692277..1692564 | + | 288 | WP_001000660.1 | YebO family protein | - |
| LJF63_RS08180 () | 1693213..1693356 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| LJF63_RS08185 () | 1693369..1693578 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LJF63_RS08190 () | 1693798..1695543 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| LJF63_RS08195 () | 1695609..1696418 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LJF63_RS08200 () | 1696415..1696981 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| LJF63_RS08205 () | 1697391..1697849 | - | 459 | WP_000156284.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|