MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP085818 Location: 3721009..3732364 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Clefairy Replicon: chromosome
Accession: NZ_CP085818 Location: 3721009..3732364 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain Clefairy Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF66_RS18150 (3716731) | 3716731..3717594 | - | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
| LJF66_RS18155 (3717698) | 3717698..3718153 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| LJF66_RS18160 (3718295) | 3718295..3719524 | + | 1230 | WP_000036838.1 | amino acid permease | - |
| LJF66_RS18165 (3719555) | 3719555..3719827 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LJF66_RS18170 (3719949) | 3719949..3720799 | + | 851 | Protein_3539 | nickel/cobalt efflux protein RcnA | - |
| LJF66_RS18175 (3721009) | 3721009..3721767 | - | 759 | WP_000134802.1 | transcriptional regulator | - |
| LJF66_RS18180 (3721754) | 3721754..3722266 | - | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| LJF66_RS18185 (3722410) | 3722410..3723486 | - | 1077 | WP_000141330.1 | hypothetical protein | - |
| LJF66_RS18190 (3723483) | 3723483..3724226 | - | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| LJF66_RS18195 (3724267) | 3724267..3726750 | - | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| LJF66_RS18200 (3726870) | 3726870..3727451 | - | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| LJF66_RS18205 (3728170) | 3728170..3728802 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| LJF66_RS18210 (3728849) | 3728849..3729385 | - | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| LJF66_RS18215 (3730193) | 3730193..3730591 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LJF66_RS18220 (3730591) | 3730591..3730818 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LJF66_RS18225 (3731027) | 3731027..3731278 | + | 252 | WP_001576352.1 | hypothetical protein | - |
| LJF66_RS18230 (3731558) | 3731558..3732364 | + | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| LJF66_RS18240 (3732649) | 3732649..3733407 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| LJF66_RS18245 (3733672) | 3733672..3734217 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LJF66_RS18250 (3734293) | 3734293..3735810 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |